mRNA_Ecto-sp13_S_contig15957.4371.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15957.4371.1
Unique NamemRNA_Ecto-sp13_S_contig15957.4371.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A6H5L4Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y0_9PHAE)

HSP 1 Score: 570 bits (1468), Expect = 7.460e-195
Identity = 349/439 (79.50%), Postives = 354/439 (80.64%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAAGAAXXXXXXXXXXXXXXXGGEVAAVTTAVSAGPPAREGDVVKEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIARTESTLQWSSESEGEXXXXXXGNNNADDN---TDGIPRASAMASKLAGSSSYGPRDSFHGLRFRGQGGPEKPPRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SEGANAAAVSSADLGGCGSLWSARCCRALRGTRRALRWAADGLVVVLVVKGSVPVVKNMAGVGGGQKMNSSFDSLRIVNSYGNFGSVTKTRGEVVLKGTRHPNPLDPMAEWKEY 1320
            LGAGLIKVRGDACW DLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVV NHIVELVLPWCLLLSR PRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAA AA               GGEVAAVT+AVSAGP AR+GDVVKEGG       XXX   XXX   XXXXXXX             GIARTEST QWSSESE  XXXXXX           TDGIPRA+A+ASKLAGSS  GPRDSFHGLRFRGQGGPEK PRSP                   XXXXXXXXXXXXX SEGANAAAVSSADLGGCGSLWSARC RALRG RRALRWAADGLVVVLVVKGSVPVVKNMAGVGGGQ+MNSSFDSLRIVNSYGNFGSVTKTRGEVVLKGTRHPNPLDPMAEWKEY
Sbjct:  185 LGAGLIKVRGDACWWDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVVNHIVELVLPWCLLLSRSPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAARAAVATPTSTQGKGVG--GGEVAAVTSAVSAGPSARKGDVVKEGGGGSTSGDXXXERGXXXTAVXXXXXXXSRPALRSRP----GIARTESTPQWSSESEXXXXXXXXXXXXXXXXXXXTDGIPRAAAIASKLAGSSGRGPRDSFHGLRFRGQGGPEKLPRSPPPSLSPSPAPAASCRGGAVXXXXXXXXXXXXXXSEGANAAAVSSADLGGCGSLWSARCWRALRGARRALRWAADGLVVVLVVKGSVPVVKNMAGVGGGQRMNSSFDSLRIVNSYGNFGSVTKTRGEVVLKGTRHPNPLDPMAEWKEY 617          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: D7G290_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G290_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 2.660e-134
Identity = 278/506 (54.94%), Postives = 283/506 (55.93%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQ--------------------------------------------------------------------ILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAAGAAXXXXXXXXXXXXXXXGGEVAAVT--TAVSAGPPAREGDVVKEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIARTESTLQWSSESEGEXXXXXXGNNNADDNTDGIPRASAMASKLAGSSSYGPRDSFHGLRFRGQGGPEKPPRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGANAAAVSSADLGGCGSLWSARCCRALRGTRRALRWAADGLVVVLVVKGSVPVVKNMAGVGGGQKMNSSFDSLRIVNSYGNFGSVTKTRGEVVLKGTRHPNPLDPMAEWKEYG 1323
            LGAGLIKVRGDACW DLTCME+HYQTQPNPNPLSWYLHHLPS EWHKAEVV NHIVELVLPWCLLLSR PRCVAGSIQ                                                                    ILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLV GLA  A XXXXXXXXXXXXXXX          TAVSAGPPAR GDVVKE G                                       GIARTESTLQWSSES   XXXXXX     +D   GIPRASA+A KLAGSS YGPRDSFHGLRFRG                                                                                WAA GLVVVLV KG++PVVKNMAGVGGGQKMNSSFDSLRIVNSYGNFGSVTKTRGEVVLKGTRH NPLDPMAEWKEYG
Sbjct:  144 LGAGLIKVRGDACWWDLTCMEYHYQTQPNPNPLSWYLHHLPSVEWHKAEVVVNHIVELVLPWCLLLSRSPRCVAGSIQPTYLAYLVAHGAAGVDGASVQLFHLTQPQVQVRHGSPPPRIGRRELCLEPGEWPSLAGGRDSRNHSLEILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVCGLAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXTAVSAGPPARTGDVVKESGGGSTSGDGGGKRSGDRTAVDSVSVSGSGSGSRPALRSRPGIARTESTLQWSSESXXXXXXXXXXXXXXND---GIPRASAIAGKLAGSSGYGPRDSFHGLRFRG--------------------------------------------------------------------------------WAAHGLVVVLVGKGTIPVVKNMAGVGGGQKMNSSFDSLRIVNSYGNFGSVTKTRGEVVLKGTRHSNPLDPMAEWKEYG 566          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A6P5A459_BRABE (Lipase maturation factor n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A459_BRABE)

HSP 1 Score: 162 bits (411), Expect = 1.100e-40
Identity = 76/116 (65.52%), Postives = 89/116 (76.72%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFP 363
            LGAGLIK+RGD CW DLTCM +HYQTQP PNPLS+YLH  P A  HK E ++NH +ELV PW + L+R  R   G +QILFQ VL+ SGNLSFLNWLT +P++ SFDD HLA LFP
Sbjct:  235 LGAGLIKIRGDQCWRDLTCMNYHYQTQPVPNPLSYYLHQTPEA-MHKFETLSNHFIELVAPWFIFLTRPFRFTCGFLQILFQVVLILSGNLSFLNWLTILPSICSFDDAHLACLFP 349          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A0G4GBJ8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GBJ8_VITBC)

HSP 1 Score: 162 bits (411), Expect = 2.290e-40
Identity = 82/131 (62.60%), Postives = 100/131 (76.34%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLS-RGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAAG 405
            LGAGLIK+RGD CW DLTCME+HYQTQP PNP+SWYLHH P  E+H AE + NHIVE  L + LL+  R  R + G++QILFQ +L+ SGNLSFLNWLT +PA+F FDDL L+ LFP+  + R VR L +G
Sbjct:  200 LGAGLIKLRGDPCWRDLTCMEYHYQTQPVPNPVSWYLHHNPQ-EFHWAETLVNHIVECCLSFNLLIPLRQCRLLGGAVQILFQMMLIVSGNLSFLNWLTILPAIFCFDDLSLSFLFPKATVDR-VRQLTSG 328          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A2V7XHX0_9BACT (Membrane protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7XHX0_9BACT)

HSP 1 Score: 152 bits (385), Expect = 6.030e-38
Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFP 363
            LGAGLIK+RGD CW DLTCM  HY+TQPNPNPLSWY HHLP A +H  EV  NH+VEL+ PW +   R  R VAG + ++FQ +L+ SGNLSFLNWLT  PA+  FDD  + RL P
Sbjct:  118 LGAGLIKLRGDPCWRDLTCMVFHYETQPNPNPLSWYFHHLP-AWFHSFEVAFNHVVELIAPWFVFGPRRARHVAGGLIVVFQVLLILSGNLSFLNWLTIAPALACFDDGLIMRLAP 232          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A2V7UNC2_9BACT (Membrane protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7UNC2_9BACT)

HSP 1 Score: 152 bits (384), Expect = 1.750e-37
Identity = 77/131 (58.78%), Postives = 92/131 (70.23%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAAGA 408
            LGAGLIK+RGD CW DLTC+ +HY TQPNPNPLSWYLH  P   +HK EV+ NH+VELV+P+ L   R  R  AG++ +LFQA+L+ SGNLSFLNWLT   AV  FDD   A L P  V  RL R ++  A
Sbjct:  168 LGAGLIKLRGDPCWRDLTCLVYHYATQPNPNPLSWYLHQAP-VWFHKVEVLFNHLVELVVPFFLFGPRRARLAAGALVVLFQALLILSGNLSFLNWLTIAVAVACFDDGVFAPLLPTSVRARLDRHVSEAA 297          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A150QYQ6_SORCE (Uncharacterized protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150QYQ6_SORCE)

HSP 1 Score: 152 bits (385), Expect = 3.550e-37
Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEW-HKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRR 381
            LGAGLIK+RGD CW DLTC+ HHY+TQP P+PLS+YLH LP+  W H   V+ NH+VELV+PW     R  R VAG + +LFQ +L+ASGNLSFLNWLT VPA+  FDD  L RLFP  V  R
Sbjct:  217 LGAGLIKLRGDPCWTDLTCLVHHYETQPVPSPLSYYLHQLPA--WVHAIGVLFNHLVELVVPWFAFGPRRARHVAGVLLVLFQGMLIASGNLSFLNWLTIVPAIACFDDGALGRLFPARVRER 337          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A7S0LZW9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZW9_9CRYP)

HSP 1 Score: 142 bits (359), Expect = 4.200e-37
Identity = 76/132 (57.58%), Postives = 89/132 (67.42%), Query Frame = 1
Query:   19 GAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLS-RGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAAGAA 411
            G+G    RGD CW DLTCM +HY+TQPNPNPLSWY H+LP   +     + NH+VEL  P+ LLL  R PR V G IQ+LFQAVL+ SGNLSFLNWLT  PA+  FDD  LA LF R   R   + L+A AA
Sbjct:   21 GSGPAGFRGDECWRDLTCMLYHYETQPNPNPLSWYFHNLPY-NFQVFSTLVNHLVELPAPFLLLLPFRRPRIVGGVIQVLFQAVLILSGNLSFLNWLTIAPAIACFDDAFLAPLFFR-TSREKAQRLSAAAA 150          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A1U7TJQ2_CARSF (Lipase maturation factor n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A1U7TJQ2_CARSF)

HSP 1 Score: 148 bits (373), Expect = 5.350e-37
Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = 1
Query:   16 LGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEW--HKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFP 363
            LGAGLIK+RGD CW DL CM+ HY+TQP PNPL++YLHHLP   W  H+AE ++ H +EL++P+ L L R    + G++Q+LFQ VL+ASGNLSFLNWLT VP++  FDD  L  LFP
Sbjct:    2 LGAGLIKIRGDQCWRDLNCMDFHYETQPVPNPLAYYLHHLP---WWFHRAETLSTHFLELLVPFFLFLGRQMCVLHGALQVLFQVVLIASGNLSFLNWLTIVPSLACFDDATLGFLFP 116          
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Match: A0A6A7FYQ8_9CRUS (Lipase maturation factor (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FYQ8_9CRUS)

HSP 1 Score: 149 bits (376), Expect = 6.460e-37
Identity = 70/130 (53.85%), Postives = 91/130 (70.00%), Query Frame = 1
Query:    1 MHAAKLGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEWHKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLNWLTAVPAVFSFDDLHLARLFPRPVLRRLVR 390
            M    LGAGLIK+RGD CW DLTCM +HYQTQP PNP++++LH  P    H  EV  NH+VEL++PW +  +R  +  +G +QI FQ +L+ SGNLSFLNWLT VP++  FDD   ARLF R  +RR+ +
Sbjct:   75 MFRIMLGAGLIKMRGDMCWRDLTCMHYHYQTQPVPNPIAYFLHQSPPVI-HMLEVAGNHVVELLVPWLVFGNRMCQLTSGVVQIAFQVILIVSGNLSFLNWLTIVPSLALFDDRFWARLFSRGTVRRVAK 203          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15957.4371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y0_9PHAE7.460e-19579.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G290_ECTSI2.660e-13454.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6P5A459_BRABE1.100e-4065.52Lipase maturation factor n=5 Tax=Branchiostoma Tax... [more]
A0A0G4GBJ8_VITBC2.290e-4062.60Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A2V7XHX0_9BACT6.030e-3862.07Membrane protein (Fragment) n=1 Tax=Acidobacteria ... [more]
A0A2V7UNC2_9BACT1.750e-3758.78Membrane protein n=1 Tax=Acidobacteria bacterium T... [more]
A0A150QYQ6_SORCE3.550e-3761.79Uncharacterized protein n=1 Tax=Sorangium cellulos... [more]
A0A7S0LZW9_9CRYP4.200e-3757.58Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A1U7TJQ2_CARSF5.350e-3759.32Lipase maturation factor n=1 Tax=Carlito syrichta ... [more]
A0A6A7FYQ8_9CRUS6.460e-3753.85Lipase maturation factor (Fragment) n=2 Tax=Hirond... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15957contigEcto-sp13_S_contig15957:386..3409 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score417.9
Seed ortholog evalue5.8e-114
Seed eggNOG ortholog2880.D7G290
Preferred nameLMF1
Model size1323
Hectar predicted targeting categoryother localisation
GOsGO:0002790,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006807,GO:0006810,GO:0006888,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009306,GO:0009987,GO:0010467,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0019216,GO:0019218,GO:0019222,GO:0019538,GO:0031323,GO:0031984,GO:0032501,GO:0032940,GO:0033036,GO:0033578,GO:0034381,GO:0034382,GO:0034645,GO:0036211,GO:0042175,GO:0042886,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046486,GO:0046903,GO:0046907,GO:0048193,GO:0050789,GO:0050790,GO:0050794,GO:0051004,GO:0051006,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051604,GO:0051641,GO:0051649,GO:0060191,GO:0060193,GO:0061365,GO:0062012,GO:0065007,GO:0065009,GO:0070085,GO:0071702,GO:0071704,GO:0071705,GO:0071830,GO:0080090,GO:0090181,GO:0090207,GO:0097006,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons4
EggNOG free text desc.protein glycosylation in Golgi
EggNOG OGs28KNS@1,2QT4H@2759
Ec32 ortholog descriptionLipase maturation factor
Ec32 orthologEc-16_002040.1
Cds size1323
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462843.249209-CDS-Ecto-sp13_S_contig15957:385..5341681462843.249209-CDS-Ecto-sp13_S_contig15957:385..534Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15957 386..534 +
1681462843.2668076-CDS-Ecto-sp13_S_contig15957:787..8871681462843.2668076-CDS-Ecto-sp13_S_contig15957:787..887Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15957 788..887 +
1681462843.2758808-CDS-Ecto-sp13_S_contig15957:1649..25991681462843.2758808-CDS-Ecto-sp13_S_contig15957:1649..2599Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15957 1650..2599 +
1681462843.2839813-CDS-Ecto-sp13_S_contig15957:3285..34091681462843.2839813-CDS-Ecto-sp13_S_contig15957:3285..3409Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15957 3286..3409 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15957.4371.1prot_Ecto-sp13_S_contig15957.4371.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15957 386..3409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15957.4371.1

>prot_Ecto-sp13_S_contig15957.4371.1 ID=prot_Ecto-sp13_S_contig15957.4371.1|Name=mRNA_Ecto-sp13_S_contig15957.4371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp
MHAAKLGAGLIKVRGDACWLDLTCMEHHYQTQPNPNPLSWYLHHLPSAEW
HKAEVVANHIVELVLPWCLLLSRGPRCVAGSIQILFQAVLVASGNLSFLN
WLTAVPAVFSFDDLHLARLFPRPVLRRLVRGLAAGAAAATPTPTPTQGKG
VGGGEVAAVTTAVSAGPPAREGDVVKEGGSGSTSGDGGGERGGGGTAVGS
GLGSGSGSGSRPALRSRPGIARTESTLQWSSESEGEEEESESGNNNADDN
TDGIPRASAMASKLAGSSSYGPRDSFHGLRFRGQGGPEKPPRSPSPSPAP
AAGCRGGAVAVASAAAASAAAAAPASSEGANAAAVSSADLGGCGSLWSAR
CCRALRGTRRALRWAADGLVVVLVVKGSVPVVKNMAGVGGGQKMNSSFDS
LRIVNSYGNFGSVTKTRGEVVLKGTRHPNPLDPMAEWKEYG
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mRNA from alignment at Ecto-sp13_S_contig15957:386..3409+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15957.4371.1 ID=mRNA_Ecto-sp13_S_contig15957.4371.1|Name=mRNA_Ecto-sp13_S_contig15957.4371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3024bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15957:386..3409+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATGCGGCAAAGCTTGGAGCGGGACTGATCAAGGTCCGGGGCGACGC CTGCTGGTTGGACCTGACGTGCATGGAGCACCACTACCAGACCCAGCCGA ATCCCAACCCGCTCTCCTGGTACCTGCATCACCTACCTAGCGCGGAATGG TAAGCCGTCGTTGTTGTTGTTTTTGATGGTGGTGGTGGTGGTTGTGGGTG GTGCTTGGCAGTTTCGTTGACGTTGGCTTGGCAAGGGGTGTGTGCCCTTG ATGCTTTGTCGTTGATAGTCGTCATCGTCGTTGTCATGCTATCCACTCAC ATGCAGCATTCTCATGTTCTAGTCCTGGTCTTGCCAAGTACCCTCGCCCC GGCACGTTCCCTGCTTCCCGCGCGACCCTTCTTTGTAACTGGCATCCAAC AGGCACAAGGCGGAAGTGGTTGCAAACCACATCGTGGAGCTGGTGCTGCC GTGGTGTCTGCTCCTCAGCAGAGGCCCACGCTGCGTCGCGGGATCAATCC AGGTACGGACGATGGTGGTACCGCTGATCCCATCTTTATCTCTTCAGTGG TGCGGGTTTCCACTCATTCTCGTGGGGGGGCTTTTCGCCGTTCTGACGAC AATGGTCACTACCCCTGCGCATGGCATTGACTGGGGCAACCACAGCGCAC ACGTTCCTCCAAAGAATGGTCTCTGGACTCGCGACCTCCTGCCAGCGAAG ACCATTCGCCAGGTTCCAGGCAGAGCTCGCGTCTGCCCATCCCAGGGTAT GGGGAGCTGTGTCGCACCTGAACCTGCGGCTGGGTCGGGTAGAGGAGCTG CACAGATGCGCCGTCAACGCCCGCGTCGCCATGTGCCGCGAGATACGCGA GATTCGTCAGCTGGTTGGAACGGTGGAATGGCTGAAGGCATCAGTACAGA ATCTCGAGGCGGCCATCAGGGGCAAGCATGATCTGCGTGCCCCGGCCATG CACGAAACGCGAGAAAGAGCCTCCCACGTCTTGTTGCCATTGCCACCGTT GAAGTGGTGTCTTTCGTTGTTGGTCCTCTGACTGCTGCTGCGTTCGAGAG TGAGTGTGTGGAGTTGTTCAATGGGCATTGAACGCGAATAGACGGGTGAA CCAATCAAAAGACGTCAGCCTCGAAAACGGGACAACAAAGACGCCCGTTT CATCACCAGCCCCCCCCCCTCCCCCGACATGCATGTGTGCTCGCGCGCCC GCCCTTGTGTGTATCTCTTGGTTCTGTCTTTACACGAATCTGTCCACCAC AACAAAAATACAAGATTTTGTTCCAAGCGGTGTTGGTGGCGTCCGGGAAC CTGTCTTTCCTCAACTGGCTGACGGCGGTGCCCGCAGTCTTCTCCTTCGA CGACCTACACCTCGCGAGGCTCTTCCCCCGGCCGGTGCTCCGACGACTCG TGCGCGGCCTTGCGGCGGGGGCGGCGGCAGCGACGCCGACGCCGACGCCG ACACAGGGGAAAGGGGTCGGGGGAGGGGAGGTAGCTGCGGTAACGACTGC TGTGTCAGCGGGGCCTCCTGCAAGGGAAGGGGATGTTGTGAAGGAGGGTG GTAGTGGGAGCACCAGCGGAGATGGCGGCGGAGAGCGGGGTGGAGGCGGA ACGGCTGTGGGTTCGGGTTTGGGTTCGGGTTCGGGTTCGGGTTCTCGTCC CGCTCTCCGTTCTCGGCCTGGGATTGCTCGCACAGAGTCCACGCTTCAGT GGTCGTCTGAGTCCGAAGGAGAAGAAGAAGAGAGCGAAAGCGGCAACAAC AACGCTGACGACAACACCGACGGCATCCCAAGGGCGTCAGCGATGGCCAG CAAGCTCGCCGGCAGCAGCAGTTACGGCCCGCGGGACTCGTTCCACGGCC TCCGCTTCCGGGGGCAGGGAGGGCCGGAAAAGCCGCCGCGGTCGCCGTCG CCGTCGCCGGCTCCTGCCGCCGGCTGTCGGGGTGGCGCCGTCGCCGTCGC CTCCGCCGCAGCCGCCTCCGCAGCGGCCGCCGCCCCCGCCTCTTCAGAGG GCGCGAACGCCGCCGCCGTTTCCTCTGCCGACCTTGGAGGGTGTGGTTCT CTGTGGAGCGCGAGGTGTTGCAGAGCCCTGCGCGGGACGCGGCGGGCGCT GAGGTGGGCGGCGGACGGGCTGGTCGTTGTGCTGGTCGTGAAGGGAAGCG TACCCGTGGTGAAGAACATGGCCGGCGTGGGCGGGGGGCAGAAGATGAAC AGCAGCTTCGACAGGTAGGCGGGGTGATGCGGTGAACATGTAGAGGAAAG GTGCGCCGGGAGAAAGAGGCCAGCGGACGGCCAGAGAAAGTAAGAAGTCA ACAACGTAGAAGGCTAGGATGGGTGCCCCCCAGAGGAGAAGTTTGAAGAG CCTCTTGTCTTAAAGACTTTCACTTCGTGTTTGACGCGACCGGATCCAAG AAGTCCAGTTTCTCTCTCGGCATTACCGCCATCCCTCGACCCTTTGATTC TGGTCTCTTCTTGCTTGGTTGGCTGTCCGTCCCTATATCTATCTGTTTAC TTGTCGGTATGTTTCGCTCCACGTCCACATCGACATAATGCTTGTCTTTT TCCTCGCTTTCCTTGCGTGCATCATCAATCCCGCGTGCCTCTTCCTGCAT TCTCACTTGGTATGACTGCATCCTTGTCCTGATGTCTTGCCTCCCCTGGT CCCCGTCTTTCCCGTTCTATTTTTCTCTCTCTTTGTCTCACTGCTTTCTT TGTCTCGCTGCTTATCTCTTCCTCTTGTCTGCCTGCTCTCTGTATCTCTC GTCTTCTTCTTCTCTTCTTCTTCTCTCTCTCTCTCCCTCTCTCTCTCTGT CTCTCTCTCTCTCTCTGTGTGTGTCTCTCTCTCTCCCTCCCTCCCTCTGA TCTCTCTTCTCCCTCTCTTGTCTGCCTGCTCCCTTGGCCACCACGAACAG CCTGCGTATCGTGAACTCCTACGGAAATTTCGGGAGCGTGACAAAGACGA GGGGAGAGGTGGTCCTCAAGGGCACCCGGCACCCCAACCCTCTCGACCCG ATGGCGGAGTGGAAAGAATACGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15957:386..3409+

>mRNA_Ecto-sp13_S_contig15957.4371.1 ID=mRNA_Ecto-sp13_S_contig15957.4371.1|Name=mRNA_Ecto-sp13_S_contig15957.4371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15957:386..3409+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATGCGGCAAAGCTTGGAGCGGGACTGATCAAGGTCCGGGGCGACGC
CTGCTGGTTGGACCTGACGTGCATGGAGCACCACTACCAGACCCAGCCGA
ATCCCAACCCGCTCTCCTGGTACCTGCATCACCTACCTAGCGCGGAATGG
CACAAGGCGGAAGTGGTTGCAAACCACATCGTGGAGCTGGTGCTGCCGTG
GTGTCTGCTCCTCAGCAGAGGCCCACGCTGCGTCGCGGGATCAATCCAGA
TTTTGTTCCAAGCGGTGTTGGTGGCGTCCGGGAACCTGTCTTTCCTCAAC
TGGCTGACGGCGGTGCCCGCAGTCTTCTCCTTCGACGACCTACACCTCGC
GAGGCTCTTCCCCCGGCCGGTGCTCCGACGACTCGTGCGCGGCCTTGCGG
CGGGGGCGGCGGCAGCGACGCCGACGCCGACGCCGACACAGGGGAAAGGG
GTCGGGGGAGGGGAGGTAGCTGCGGTAACGACTGCTGTGTCAGCGGGGCC
TCCTGCAAGGGAAGGGGATGTTGTGAAGGAGGGTGGTAGTGGGAGCACCA
GCGGAGATGGCGGCGGAGAGCGGGGTGGAGGCGGAACGGCTGTGGGTTCG
GGTTTGGGTTCGGGTTCGGGTTCGGGTTCTCGTCCCGCTCTCCGTTCTCG
GCCTGGGATTGCTCGCACAGAGTCCACGCTTCAGTGGTCGTCTGAGTCCG
AAGGAGAAGAAGAAGAGAGCGAAAGCGGCAACAACAACGCTGACGACAAC
ACCGACGGCATCCCAAGGGCGTCAGCGATGGCCAGCAAGCTCGCCGGCAG
CAGCAGTTACGGCCCGCGGGACTCGTTCCACGGCCTCCGCTTCCGGGGGC
AGGGAGGGCCGGAAAAGCCGCCGCGGTCGCCGTCGCCGTCGCCGGCTCCT
GCCGCCGGCTGTCGGGGTGGCGCCGTCGCCGTCGCCTCCGCCGCAGCCGC
CTCCGCAGCGGCCGCCGCCCCCGCCTCTTCAGAGGGCGCGAACGCCGCCG
CCGTTTCCTCTGCCGACCTTGGAGGGTGTGGTTCTCTGTGGAGCGCGAGG
TGTTGCAGAGCCCTGCGCGGGACGCGGCGGGCGCTGAGGTGGGCGGCGGA
CGGGCTGGTCGTTGTGCTGGTCGTGAAGGGAAGCGTACCCGTGGTGAAGA
ACATGGCCGGCGTGGGCGGGGGGCAGAAGATGAACAGCAGCTTCGACAGC
CTGCGTATCGTGAACTCCTACGGAAATTTCGGGAGCGTGACAAAGACGAG
GGGAGAGGTGGTCCTCAAGGGCACCCGGCACCCCAACCCTCTCGACCCGA
TGGCGGAGTGGAAAGAATACGGC
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