prot_Ecto-sp13_S_contig15954.4370.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15954.4370.1
Unique Nameprot_Ecto-sp13_S_contig15954.4370.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15954.4370.1 vs. uniprot
Match: D7FYY0_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY0_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.450e-51
Identity = 81/87 (93.10%), Postives = 82/87 (94.25%), Query Frame = 0 
Query:    1 MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIHVLVVALYLVCQVIPTKKVQRS 87
            MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIH LVV LYLVCQ+IPTKK Q  
Sbjct:    1 MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIHALVVGLYLVCQMIPTKKAQSK 87
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BLAST of mRNA_Ecto-sp13_S_contig15954.4370.1 vs. uniprot
Match: A0A6H5JJU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU3_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 8.330e-48
Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 0 
Query:    1 MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIHVLVVALYLVCQVIPTKKVQRS 87
            MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIH LV+ALYLVCQVIPTKK Q  
Sbjct:  418 MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLGLTESLDVWGTFSFGIHALVIALYLVCQVIPTKKAQSK 504
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15954.4370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYY0_ECTSI1.450e-5193.10Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JJU3_9PHAE8.330e-4894.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15954contigEcto-sp13_S_contig15954:122..1641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15954.4370.1mRNA_Ecto-sp13_S_contig15954.4370.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15954 122..1641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15954.4370.1 ID=prot_Ecto-sp13_S_contig15954.4370.1|Name=mRNA_Ecto-sp13_S_contig15954.4370.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
MITTAAREGKKKISPYMPQEGAAGMAYHGLCVFLVTLTVNYLVIPFQLLG
LTESLDVWGTFSFGIHVLVVALYLVCQVIPTKKVQRSVAPTY*
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