mRNA_Ecto-sp13_S_contig1595.4364.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1595.4364.1
Unique NamemRNA_Ecto-sp13_S_contig1595.4364.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI)

HSP 1 Score: 764 bits (1972), Expect = 1.040e-276
Identity = 420/450 (93.33%), Postives = 429/450 (95.33%), Query Frame = 3
Query:    3 MRRALQATRSSLPSRPRHHHQSRRRVLHVYTHGEGFLGALGHGDFAAREEALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREVLPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDSRVLMSGLVADTRKTVPTPVEVDIPASEPGSFFGGFNDTIVKTRSPPVASTT--------GTGADLPTFHRVSFTSAGARVTPFTLPGLAEGTRVDSVSVGWQHTVALVH 1328
            MRRALQATRSSLPSRPRHHHQSR+R LHVYTHGEGFLGALGHGDF+ARE+ALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRI+RIQRLFPFVVTAINALASSREVLPSPVSVPL+AEPAAASTASTVTAALHDARPS   PPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGP+NVFTVFEPLRVGGRALERE VVKLAVGFQQVLVLCESGRVFGWGKGLRGQLG+GGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMED RVLMSGL ADTR+TVPTPVEVDIPASEPGSFF GFNDTIVKT S PVAST         GTGADLPTFHRVSFTSAGARVTPF LPG+ EGTRVDSVSVGWQHTVALVH
Sbjct:    1 MRRALQATRSSLPSRPRHHHQSRKRALHVYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPLMAEPAAASTASTVTAALHDARPSLHFPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVPTPVEVDIPASEPGSFFSGFNDTIVKTASTPVASTITDKSTAAGGTGADLPTFHRVSFTSAGARVTPFALPGVPEGTRVDSVSVGWQHTVALVH 450          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A6H5JG88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG88_9PHAE)

HSP 1 Score: 726 bits (1873), Expect = 1.200e-261
Identity = 394/442 (89.14%), Postives = 405/442 (91.63%), Query Frame = 3
Query:    3 MRRALQATRSSLPSRPRHHHQSRRRVLHVYTHGEGFLGALGHGDFAAREEALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREVLPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDSRVLMSGLVADTRKTVPTPVEVDIPASEPGSFFGGFNDTIVKTRSPPVASTTGTGADLPTFHRVSFTSAGARVTPFTLPGLAEGTRVDSVSVGWQHTVALVH 1328
            MRRALQATRSSLPSRPRHHHQSR+R LHVYTHGEGFLGALGHGDF+AREE LPVAALASRDLRC SAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRI+RIQRLFPFVVTAINALASSREVLPSPV VPLIA+P+AASTAST+TAA HDARPS  S P PSSLRA SVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPEN FTVFEPLRVGGRALERE+VVKLAVG QQVLVLCESGRVFGWGKGLRGQLG+G E MELPEEVELPGKVVD    XXXXXXXXXXXXXXXXX MQGTEVKTDGRVPVYHDQL+PRKVDVGGGRAVEAFCSS NT+LRMED RVLM G  ADTR+TVPTPVEVDIPASEPGSFFGGFNDTIVKT          T  DLPTFHRVSFTSAGARVTPFTLPGLAEGTRVDSVSVGWQHTV LVH
Sbjct:   17 MRRALQATRSSLPSRPRHHHQSRKRALHVYTHGEGFLGALGHGDFSAREETLPVAALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVPVPLIAKPSAASTASTITAAFHDARPSSYSLPAPSSLRANSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENEFTVFEPLRVGGRALEREQVVKLAVGLQQVLVLCESGRVFGWGKGLRGQLGVGDETMELPEEVELPGKVVDLRSGXXXXXXXXXXXXXXXXXKMQGTEVKTDGRVPVYHDQLHPRKVDVGGGRAVEAFCSSSNTMLRMEDGRVLMWGFEADTRRTVPTPVEVDIPASEPGSFFGGFNDTIVKTT---------TAVDLPTFHRVSFTSAGARVTPFTLPGLAEGTRVDSVSVGWQHTVVLVH 449          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A8K1FR76_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR76_PYTOL)

HSP 1 Score: 134 bits (338), Expect = 2.710e-30
Identity = 108/337 (32.05%), Postives = 150/337 (44.51%), Query Frame = 3
Query:   87 VYTHGEGFLGALGHGDFAAREEALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREV---LPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMMELPEEV-ELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDSRVLMSGLVADTRKTVPTPVE 1085
            +Y++GEGFLGALG G++A  E   P+       +R +SAGW H+  V  D G+  V+GR    +  +R + + RL P+++  INA     E+   LP+ V +P                                  + K + CS ALT  L E GK++ MG N +GQCG G E V +V  P  V  R  E E V  +A GFQ  LV+  SG VF WGKG RGQLG G   ++ P+EV  L  + V                       + G  +   G+     DQ+ PR +       ++  CS F+T    ED R  + G     RK     VE
Sbjct:   29 IYSYGEGFLGALGTGNYANVELPTPLPTTTDLTIRELSAGWAHAGFVTED-GDAYVYGRTHSFRDVIRATNMNRLTPWLLRWINAFTMRTEIDTLLPAKVQLP-------------------------------EGEKVKKMVCSTALTFFLTESGKLFTMGANFYGQCGTGEEGV-SVLTPTHV--RIGEDEPVADIAAGFQHGLVVTTSGNVFSWGKGERGQLGFGTANVKTPQEVIALKNRNV---VSVSAGFNHSSALTKDGELFLWGKLLNPKGKDESNGDQVTPRLIKTRDAVRLQE-CSHFHTTFITEDHRAWVVGRTPSARKETDEYVE 326          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.610e-29
Identity = 102/333 (30.63%), Postives = 151/333 (45.35%), Query Frame = 3
Query:   87 VYTHGEGFLGALGHGDFAAREEALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREV---LPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMMELPEE-VELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDSRVLMSGLVADTRKTVP 1073
            VY++GEG+LGALG G +A   +   +   A+     +SAGW H   V    G+  V+GR    +  +R + IQR+ P+++   N     R V   LP+ V++P                                  RA+ + CSAALT+VL E G+++  G N +GQCG   E V    EP+RV   AL+ ++VV +A G+Q  L +  SG VF WGKG RGQLG G   ++ P+E + L GK V                       + G  +  +G+     DQ+ PR V       +   CS F+T     D ++ + G     R+  P
Sbjct:   29 VYSYGEGYLGALGTGAYAGVAQPTALEEPAALGATQLSAGWAHGGFVS-SAGDTFVFGRALSFRDVIRSTNIQRVAPWLLAWTNEFTRRRGVDTLLPARVALP-------------------------------EGERARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREGVSEP-EPVRV---ALDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAPQELIALKGKAV---AAVSAGFNHSSALTRDGELFVWGKLLNLEGKDENGGDQVVPRLVRTSDAVTLLQ-CSHFHTAFLTADDKIWVVGRTPSGRQEQP 321          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A484E934_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E934_BRELC)

HSP 1 Score: 119 bits (297), Expect = 6.480e-26
Identity = 96/327 (29.36%), Postives = 148/327 (45.26%), Query Frame = 3
Query:   87 VYTHGEGFLGALGHGDFAAREEALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREVLPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIGGEMMELPEE-VELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDSRVLMSGLVADTRK 1064
            + ++G+GFLGALG G +       P+A   +  ++ +S GW H+  V  D G+  ++GR    +  +R + +QR+ P +V  +N+   SR V                    T+  AL +          P   R K + CSAALT +L E GK++ +G N +GQCG G E V +V  P  V     + ++VV +A G+Q  L + E+G VF WGKG RGQLG G    + P+E + L GK +                       + G  +   G      DQ+ PR V       +   CS F+T     D+++ + G     R+
Sbjct:   34 LLSYGDGFLGALGTGGYDDVVAPTPLATTTALSVKEISVGWAHAGFVT-DQGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTRSRGV-------------------DTLEPALLEM---------PDRERVKKIVCSAALTFILTECGKLFTLGANGYGQCGIGEEGV-SVQLPTHV---RFDGDKVVDIASGYQHGLAVTENGTVFCWGKGERGQLGFGSGNTDAPQELIALKGKRI---VKVDAGFNYSCAITEDGELYVWGKLLNPKGMSEANGDQITPRLVQTSDAVKLSK-CSHFHTSFITADNKIWLLGRTPSGRR 323          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A196SGG2_BLAHN (Ankyrin repeat-containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGG2_BLAHN)

HSP 1 Score: 103 bits (256), Expect = 2.330e-20
Identity = 74/228 (32.46%), Postives = 110/228 (48.25%), Query Frame = 3
Query:   81 LHVYTHGEGFLGALGHGDFAAREEALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREVLPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGGRALEREEV-VKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIG 761
            L VYT+G+G +GALGH D+  RE    V +L  R +  ++ GW H+  V  D GE++++GR  D++  +    +    P V+ + N    +  +                 T       + D +                VA S AL+  L +   +Y  GYNR+GQCG   ++V  ++ P +V    L+ +E+ VKLA GFQ    LCESGRV+ WGK   GQLG G
Sbjct:   33 LSVYTYGKGAIGALGHNDYNDREYPCRVDSLEGRGIHKIACGWAHNCLVDGD-GEMVIFGRTQDVRNIIGAGNMISYLPKVIRSFNNFFKNTVI----------------ETRFPSVLPIEDGK-------------CVDVAASMALSFCLTDTHHIYAYGYNRYGQCGVDMKDV-NLYAPKQV---MLDEDEIPVKLACGFQHACCLCESGRVYAWGKANHGQLGRG 226          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A7S1CCH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCH6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.340e-19
Identity = 78/234 (33.33%), Postives = 112/234 (47.86%), Query Frame = 3
Query:   69 RRRVLHVYTHGEGFLGALGHGDFAAREEALPVAALAS--RDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREVLPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSA-ALTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIG 761
            RR+ +  ++ G+G+LGALGHG+     +   +  LA    D+  V AGW HSAA   D G  ++WGRP+D KQ LR   I    P++  A+  + S R VL                  ST+   +  A               + VAC A ALTV +   G+V+ +G N  GQCG G  +    F+   V   +L+   +V    GF   L L   G+++ WG+G RGQLG+G
Sbjct:   43 RRQRVGAFSFGKGYLGALGHGNLGDAPDVTLIRELAEVGADVTSVGAGWGHSAATTSD-GAAVIWGRPYDFKQTLRTHHIHDFAPWLARALGRI-SGRVVL-----------------LSTLPTRIDGADEEHF----------ERVACGAGALTVGVTRSGRVFSVGVNFHGQCGTGATSACE-FDWAPVA--SLDGAGIVDARCGFAHTLALAADGQLYAWGRGHRGQLGLG 244          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: B7G4H9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4H9_PHATC)

HSP 1 Score: 88.2 bits (217), Expect = 3.970e-15
Identity = 91/259 (35.14%), Postives = 116/259 (44.79%), Query Frame = 3
Query:   72 RRVLHVYTHGEGFLGALGHGDFAAR-------EEALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRIQRLFPFVVT--AINALAS------SREVLPSPVSVPLIAEPAAA---STASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQG--PENVFTVFEPLR---------VGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIG 761
            RR   VY  G G+ GA G+G F          EEA     +    ++ +S GW H+A +  D   +L+ GRP D    LR+ R+    P  V   AIN+  +      SR V P  +   LI   A      T     A  H   P       P S    SV+CSAALT ++ E GKVY  G N +GQCG G    +V+    PLR           G   +   VV +A+G Q  + L E G VF WGKG RGQLG G
Sbjct:   28 RRTFAVYAVGSGWTGAFGNGRFDQEISGHNDEEEAGSPLKIYDGSVKDISLGWGHTAILTEDR-RLLLAGRPHDFSVLLRLRRL----PLWVRNYAINSSINEFRGLDSRSVHPIALIGRLITWLAIRFKYPTTELEAARRHSIFPELAEIALPDSEVPSSVSCSAALTAIVTESGKVYAFGLNGFGQCGIGMTSNHVWNPSSPLRGLTSEFANQPRGEMEQSYPVVDVALGLQHGICLNEVGEVFCWGKGERGQLGQG 281          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A7S2XT67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XT67_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 9.910e-12
Identity = 81/270 (30.00%), Postives = 121/270 (44.81%), Query Frame = 3
Query:   72 RRVLHVYTHGEGFLGALGHGDFAA-------REEALPVAALAS-------RDLRCVSAGWTHSAAVCRDTG----EVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREVLPS---PVSVPLIAEPAAASTASTVTAALHDAR---PSPLSPPTPSS---LRAKSVACSAA--LTVVLGEDGKVYCMGYNRWGQCGQGPENVFTVFEPLRVGG-----------RALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIG 761
            RR + VY  G+G+ GALG  DF          EEA  +  +           +   +AGW HSA + +D      +++V GRP D +  LR+ RI    PF+ + +   +  +   P    P     + +        T++   +  R   P  ++ P P     + + SV  SA+  LT V+G  GK+Y MG N  GQCG    N   V+ P  V G           +  +   +V +A+G Q  L + E G +F WGKG RGQLG+G
Sbjct:   51 RRGMAVYVSGDGWTGALGSPDFVDFTRPAENSEEAFSLTEVKQYADQTPFSGVIAAAAGWGHSALIIQDPSTKEKKLMVCGRPQDFQNLLRLRRIP---PFIRSPLMKRSFDQFYEPDRDQPTMFDQLIDAMIGDKHPTISTDRNLTRTVFPHFVTVPLPDDDEPIESSSVVLSASVGLTAVVGASGKLYTMGINSRGQCGVEFSN--NVWTPTPVVGLSTAFPSEGRPKLQQESNIVSVALGLQHGLAIDEQGSLFSWGKGHRGQLGLG 315          
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Match: A0A484NR19_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484NR19_9ASTE)

HSP 1 Score: 71.2 bits (173), Expect = 1.950e-9
Identity = 69/232 (29.74%), Postives = 96/232 (41.38%), Query Frame = 3
Query:   87 VYTHGEGFLGALGHGDFAAREEALPVAALASRDLRCVSAGWTHSAAVCRDT------GEVLVWGRPFDLKQPLRISRIQRLFPFVVTAINALASSREVLPSPVSVPLIAEPAAASTASTVTAALHDARPSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQG-PENVFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGIG 761
            ++T+GEG  GALGHGD  +      V +L    ++ V+ G  H+AAV   T      G++  WG   D  +     R ++L P  VT +  +   +                                                V+C   LTV L   GKVY MG    GQ G   PE+     + + V    LE E V +++ G   V+VL  SGRV+ WGKGL GQLG+G
Sbjct:  436 LFTYGEGSFGALGHGDTKSLLRPKEVMSLKGLWVKAVACGPWHTAAVVETTSDANGAGKLFAWGDG-DKGKLGHEDREKKLVPTRVTMLEGVDFVQ------------------------------------------------VSCGRTLTVGLSNTGKVYTMGSTIHGQLGHPQPED-----KTVSVVQGELEDEFVREVSTGSHHVVVLTSSGRVYTWGKGLNGQLGLG 613          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1595.4364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL82_ECTSI1.040e-27693.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG88_9PHAE1.200e-26189.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1FR76_PYTOL2.710e-3032.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XTS7_9STRA1.610e-2930.63Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A484E934_BRELC6.480e-2629.36Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A196SGG2_BLAHN2.330e-2032.46Ankyrin repeat-containing protein n=1 Tax=Blastocy... [more]
A0A7S1CCH6_9STRA1.340e-1933.33Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
B7G4H9_PHATC3.970e-1535.14Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2XT67_9STRA9.910e-1230.00Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A484NR19_9ASTE1.950e-929.74Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1595contigEcto-sp13_S_contig1595:239..3955 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score770.0
Seed ortholog evalue6e-220
Seed eggNOG ortholog2880.D8LL82
Model size1331
KEGG koko:K19607
Hectar predicted targeting categorymitochondrion
Exons3
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-24_002600.1
Cds size1329
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462842.8805268-UTR-Ecto-sp13_S_contig1595:238..2401681462842.8805268-UTR-Ecto-sp13_S_contig1595:238..240Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1595 239..240 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462842.8922682-CDS-Ecto-sp13_S_contig1595:240..10271681462842.8922682-CDS-Ecto-sp13_S_contig1595:240..1027Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1595 241..1027 +
1681462842.9020612-CDS-Ecto-sp13_S_contig1595:2062..23581681462842.9020612-CDS-Ecto-sp13_S_contig1595:2062..2358Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1595 2063..2358 +
1681462842.911543-CDS-Ecto-sp13_S_contig1595:3709..39551681462842.911543-CDS-Ecto-sp13_S_contig1595:3709..3955Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1595 3710..3955 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1595.4364.1prot_Ecto-sp13_S_contig1595.4364.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1595 241..3955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1595.4364.1

>prot_Ecto-sp13_S_contig1595.4364.1 ID=prot_Ecto-sp13_S_contig1595.4364.1|Name=mRNA_Ecto-sp13_S_contig1595.4364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=443bp
MRRALQATRSSLPSRPRHHHQSRRRVLHVYTHGEGFLGALGHGDFAAREE
ALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRISRI
QRLFPFVVTAINALASSREVLPSPVSVPLIAEPAAASTASTVTAALHDAR
PSPLSPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPEN
VFTVFEPLRVGGRALEREEVVKLAVGFQQVLVLCESGRVFGWGKGLRGQL
GIGGEMMELPEEVELPGKVVDLRSGFSHAVAILENGDVYTWGKMQGTEVK
TDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDSRVLMSGLVA
DTRKTVPTPVEVDIPASEPGSFFGGFNDTIVKTRSPPVASTTGTGADLPT
FHRVSFTSAGARVTPFTLPGLAEGTRVDSVSVGWQHTVALVH*
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mRNA from alignment at Ecto-sp13_S_contig1595:239..3955+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1595.4364.1 ID=mRNA_Ecto-sp13_S_contig1595.4364.1|Name=mRNA_Ecto-sp13_S_contig1595.4364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1595:239..3955+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCATGCGTCGAGCTCTCCAAGCCACACGTTCCTCACTCCCTTCCCGACCC CGACATCACCACCAATCTCGCAGGCGAGTGCTCCACGTCTACACCCACGG TGAGGGCTTCCTCGGCGCACTGGGCCATGGCGACTTCGCGGCACGAGAAG AGGCGCTCCCCGTTGCGGCCCTCGCGTCTAGGGATCTGCGCTGCGTTAGC GCGGGCTGGACGCACTCCGCTGCCGTCTGCAGAGACACCGGGGAGGTGCT GGTGTGGGGCCGGCCCTTCGACCTGAAGCAACCCTTGCGGATCAGTCGCA TCCAGCGCCTGTTCCCGTTCGTTGTCACCGCGATCAACGCCCTCGCCAGC TCGAGAGAGGTCCTCCCGAGTCCGGTCTCCGTCCCACTGATTGCGGAGCC CGCCGCGGCTTCGACAGCCTCCACTGTCACCGCCGCCTTGCACGACGCCC GCCCGTCGCCGCTCTCTCCCCCGACCCCTTCCTCCCTCAGAGCGAAGAGC GTCGCGTGCTCGGCCGCTCTGACCGTGGTCCTCGGCGAGGACGGCAAGGT CTACTGCATGGGGTACAACCGCTGGGGGCAGTGCGGCCAGGGGCCCGAGA ACGTCTTCACCGTCTTCGAGCCGCTTCGAGTGGGCGGCCGCGCGCTCGAG AGGGAGGAGGTGGTCAAGCTGGCCGTCGGCTTTCAGCAGGTGCTGGTGCT CTGCGAGAGCGGCAGGGTGTTCGGCTGGGGGAAAGGGCTGAGGGGGCAGC TGGGCATCGGCGGCGAGATGATGGAGCTCCCTGAGGAAGGTGGGTGGTTC TCCAGCGGTGGGAGCGTCTGGTCTGGGTCTGTTGTTGCTCTGCCTCCCCT GCGCGCGGTGTTTTTGCTCTGCGACCCACTGAGCTCCGTTCTCTGCGATT GCACGGAGCTCTGCACTCTGCGATGCACGGAAGCATTCGCCGTCGGTGTG GTGTGTAGTGTGTGAGTGATAGGCTCTCACAAAAACATCACTCAGCACCG AGACGGACTCGAAACAATCTTGCGCCCCAACACACGCCTCCGTTAAGCCA ACCCACACATTCGTGCCTCTCCTTGGCTCCCCTCGAACGCACTCATTGAC CACTGCTGTACAGCAGTACAGTTGTATAGTAGTCCTGTGTCCACCAAGCT ACTGACCCTACGTACACAAGCAGTTCCTTTTGCACTGTCGAGCTGACGGG CGAAAGACCAAATTACAAACGTGCTGCGGATAGCCTCCACCCATCCCGCA CCAGCAAGTGCAGTTTGGTAGTTTGACGACAATTAGACGCCTTCAGGCGA ATGCGTCACACTTCAAGGTATCTCAGTCCACTGCAAAAACATTCGAAACC GTTTGTACAGGAACACGTCGAGCAATGGCAGCACCGACGTGTGGTCAATG TGAATGCTGTGGAACTGTTGTCGGGCAGTCCCCAGCCCTCCACCCTTATC ATCACCAACATACCCCTTCTGCGCACACTGGGGACGAATCCGCGCGATGG CGACAGCGGCCAAGTCCACTGTTATCACTGCTGTCCAAAGAGCAAAAACC TGTCAGCAACCATGTAGCTTGTTGCCTCCTTCGGGCGCTGTTGATGTCCC ATCCCGCGCGTCTTAAAGCCGGGCATGTCTGAAGTCGATACCATCGAACG TCACCTTGGATTACATGAGTACACGTCGAAAGTGTGGATATATTTCAGGA CCGGCGCCTCTATCGAGGTAGTACTTGAAGTCTTTCCATGATTCTTCCTA TCTCTTTTGCCGAAAAGTCGAATTGACGCTCAACCCTCCCACCCCCTCCC TCTGTTGCCCACGCCCCCCCGCAGTCGAACTACCCGGCAAGGTGGTGGAC CTCCGCAGCGGTTTCAGCCACGCGGTGGCCATCCTCGAGAACGGGGATGT CTACACCTGGGGCAAGATGCAGGGCACGGAGGTGAAGACGGACGGCAGGG TCCCCGTGTATCACGACCAGCTCTACCCCCGCAAGGTGGACGTCGGGGGA GGGCGAGCCGTCGAGGCCTTCTGCTCGTCGTTCAACACCCTGCTGAGGAT GGAGGACAGCAGGGTGCTCATGTCGGGCCTTGTGGCCGACACTCGGAAAA CGGTTCCGACGCCGGTTGAGGTGAGGAGACGGGGGGGCGGGGAGGAACAG AGAGTACCGACCGGTGATGTGTAGTGTTTGCCGAACGCTAAACTACATGG CGATCGCCGCAAGTCGTCGATAATACGCGAAGCAGTGTCTACCCAATATG AAAAGAGAGAGTTTTGGATTGTGAAAATCGATCCAAAGGGTAGAACAGAG ACAACAAAAGAAACTGGACACGCATTTCACGTACGTTCTGCTACAGTAGC AAGGCATCCGCGTGCCCCGGAACAATCCCCAAGCATGGTTTGTACCGCCC TGCTGAGCAACAGCTGTCGCCCGCTGTCGGGTTGCCTATCCTCCCGGGCC TACCAACCCCCCACAAATCTGTTAGCCTGGACTTCAGTTGAAAATAGGCA TGGACGTAGTTTTTGCCGCTGGTGTTGCGTTTGGCGTTTCGTCATTGTTG CTACGTGTTTTTTTCAGTATTTTTTACGTGGACGTTGCCGGTGTGGGCTG TAACCGCCAAAGATCATATAAAGTTTTCGAGGATTGAGTAAAAAAAGCCC TGGATGTTCTTGTGTACTGTGTCGTCCTTAGATCACCGTCGGGTTGTTGG CTCGTTGAAAGACATCGACAACAGCAGTAGCAACGACGAAGAGCTGGGAT TACGAACGCGTGGTTTACACAGGCCGCGGCATCGTTCCCTCGCCTTGAAG CGCGCTCAGAGGATTTGTCGGGAAACACTTGATCCGCAGCCACCCTCTTC CCCCGTCTCGGCGGCGGGGAGTTTGTGGCTCCGGGTTGTTTTGTTACCCT CTAACCTTCTCGTTTCATGAGGCACAAGCGCAGCGAAAAGCTCGAGATTA AACCTCCAGATTTGCACGCGTCGAGAACGCTGTCGGGTCCGTCCTGACGC GGCTCCGCACCGCACTGGGCTCTATATTCCCATCCTTGGGCGATGCTGTC TCCTTTCCCTGTCGAGCGTTCTCTTCTCTTCTTCGCCCTCGGGTGCGAAC TTGGAGAGAGTTTGGCAAAGGGGGGGCAGCTATTACGTGTCGGGGAATAA CCATAGAGCGCACATTTCTTTTTCGTTTTTCCTTCGTGTGGTCATATTTT TCAGTTGATTTTCAGCCGCAGAAACGAAGGGTTCAAGGGGAAGTACGTTT TGTTTTTTACTTAAAACACCCCAATTGCAGCCATGTCGACAGTTAGTGCT CCGCCATTTCGCCCGTAGAAAAGTTTGCCGAAGAATAGCTGCTGCTGCTG ATGCGCTCAAGGCATCCGGTTGTTTTGTGCATCTGGTCGAAGTTGTCATT CCTTCCCCCTTCACCCTCTCTTGGCAAAACCGACGCGCCCGCGTTCCAAC TGAAAAATATTGTCGTGCCAGGTCGACATCCCAGCGTCGGAGCCCGGATC GTTCTTTGGCGGTTTCAACGACACCATTGTCAAGACAAGAAGTCCACCTG TTGCCTCTACGACCGGTACCGGAGCCGATCTGCCGACCTTCCATCGAGTC TCTTTCACGAGCGCGGGCGCGAGGGTAACTCCTTTCACCCTGCCCGGCCT AGCCGAAGGAACGCGCGTAGATTCCGTCTCGGTAGGCTGGCAGCACACTG TCGCCCTGGTTCACTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1595:239..3955+

>mRNA_Ecto-sp13_S_contig1595.4364.1 ID=mRNA_Ecto-sp13_S_contig1595.4364.1|Name=mRNA_Ecto-sp13_S_contig1595.4364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1329bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1595:239..3955+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTCGAGCTCTCCAAGCCACACGTTCCTCACTCCCTTCCCGACCCCG
ACATCACCACCAATCTCGCAGGCGAGTGCTCCACGTCTACACCCACGGTG
AGGGCTTCCTCGGCGCACTGGGCCATGGCGACTTCGCGGCACGAGAAGAG
GCGCTCCCCGTTGCGGCCCTCGCGTCTAGGGATCTGCGCTGCGTTAGCGC
GGGCTGGACGCACTCCGCTGCCGTCTGCAGAGACACCGGGGAGGTGCTGG
TGTGGGGCCGGCCCTTCGACCTGAAGCAACCCTTGCGGATCAGTCGCATC
CAGCGCCTGTTCCCGTTCGTTGTCACCGCGATCAACGCCCTCGCCAGCTC
GAGAGAGGTCCTCCCGAGTCCGGTCTCCGTCCCACTGATTGCGGAGCCCG
CCGCGGCTTCGACAGCCTCCACTGTCACCGCCGCCTTGCACGACGCCCGC
CCGTCGCCGCTCTCTCCCCCGACCCCTTCCTCCCTCAGAGCGAAGAGCGT
CGCGTGCTCGGCCGCTCTGACCGTGGTCCTCGGCGAGGACGGCAAGGTCT
ACTGCATGGGGTACAACCGCTGGGGGCAGTGCGGCCAGGGGCCCGAGAAC
GTCTTCACCGTCTTCGAGCCGCTTCGAGTGGGCGGCCGCGCGCTCGAGAG
GGAGGAGGTGGTCAAGCTGGCCGTCGGCTTTCAGCAGGTGCTGGTGCTCT
GCGAGAGCGGCAGGGTGTTCGGCTGGGGGAAAGGGCTGAGGGGGCAGCTG
GGCATCGGCGGCGAGATGATGGAGCTCCCTGAGGAAGTCGAACTACCCGG
CAAGGTGGTGGACCTCCGCAGCGGTTTCAGCCACGCGGTGGCCATCCTCG
AGAACGGGGATGTCTACACCTGGGGCAAGATGCAGGGCACGGAGGTGAAG
ACGGACGGCAGGGTCCCCGTGTATCACGACCAGCTCTACCCCCGCAAGGT
GGACGTCGGGGGAGGGCGAGCCGTCGAGGCCTTCTGCTCGTCGTTCAACA
CCCTGCTGAGGATGGAGGACAGCAGGGTGCTCATGTCGGGCCTTGTGGCC
GACACTCGGAAAACGGTTCCGACGCCGGTTGAGGTCGACATCCCAGCGTC
GGAGCCCGGATCGTTCTTTGGCGGTTTCAACGACACCATTGTCAAGACAA
GAAGTCCACCTGTTGCCTCTACGACCGGTACCGGAGCCGATCTGCCGACC
TTCCATCGAGTCTCTTTCACGAGCGCGGGCGCGAGGGTAACTCCTTTCAC
CCTGCCCGGCCTAGCCGAAGGAACGCGCGTAGATTCCGTCTCGGTAGGCT
GGCAGCACACTGTCGCCCTGGTTCACTAA
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