prot_Ecto-sp13_S_contig15937.4359.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15937.4359.1
Unique Nameprot_Ecto-sp13_S_contig15937.4359.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
BLAST of mRNA_Ecto-sp13_S_contig15937.4359.1 vs. uniprot
Match: D7FXH9_ECTSI (Centrosomal protein 120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH9_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.170e-19
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    2 LEGKLRKALSEVEGRERKLKAREESWKTDHAQKLSELQLLQRRLREETKHQV 53
            LEGKLRKALSEV  RER+LKAREESWKTDHAQKLSELQLLQRRLREETKHQV
Sbjct: 1066 LEGKLRKALSEVGARERQLKAREESWKTDHAQKLSELQLLQRRLREETKHQV 1117          
BLAST of mRNA_Ecto-sp13_S_contig15937.4359.1 vs. uniprot
Match: A0A6H5JVP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.670e-17
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    2 LEGKLRKALSEVEGRERKLKAREESWKTDHAQKLSELQLLQRRLREETKHQV 53
            LEGKLRKALSEVE R R+L AREESW TDHAQKLSELQLLQRR REETKHQV
Sbjct:  996 LEGKLRKALSEVEARGRQLNAREESWTTDHAQKLSELQLLQRRPREETKHQV 1047          
BLAST of mRNA_Ecto-sp13_S_contig15937.4359.1 vs. uniprot
Match: A0A7S2SG35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SG35_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 7.120e-10
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    2 LEGKLRKALSEVEGRERKLKAREESWKTDHAQKLSELQLLQRRLREETKHQV 53
            LE +LR+AL +VE R+RKL A EE  +  HAQKLSELQLLQRRLRE+++H+V
Sbjct:  374 LESRLRRALQDVEARKRKLAAAEEDLRQQHAQKLSELQLLQRRLREDSRHEV 425          
BLAST of mRNA_Ecto-sp13_S_contig15937.4359.1 vs. uniprot
Match: A0A7S3Y741_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y741_HETAK)

HSP 1 Score: 50.4 bits (119), Expect = 2.960e-6
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    2 LEGKLRKALSEVEGRERKLKAREESWKTDHAQKLSELQLLQRRLREETKHQV 53
            LE +LRKAL+E EG++R   A  +    + A++LSELQL+QRR+REE KHQV
Sbjct:    6 LEARLRKALAEAEGQQRAAAAARQKDADEAARRLSELQLMQRRVREEAKHQV 57          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15937.4359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXH9_ECTSI3.170e-1994.23Centrosomal protein 120 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVP1_9PHAE8.670e-1788.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SG35_9STRA7.120e-1065.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Y741_HETAK2.960e-655.77Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15937contigEcto-sp13_S_contig15937:3297..3455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15937.4359.1mRNA_Ecto-sp13_S_contig15937.4359.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15937 3297..3455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15937.4359.1 ID=prot_Ecto-sp13_S_contig15937.4359.1|Name=mRNA_Ecto-sp13_S_contig15937.4359.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
QLEGKLRKALSEVEGRERKLKAREESWKTDHAQKLSELQLLQRRLREETK
HQV
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