prot_Ecto-sp13_S_contig15935.4358.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15935.4358.1
Unique Nameprot_Ecto-sp13_S_contig15935.4358.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length753
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15935.4358.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 919 bits (2376), Expect = 0.000e+0
Identity = 694/796 (87.19%), Postives = 699/796 (87.81%), Query Frame = 0 
Query:    1 MDLGKRRISEDERERVSSLHSNATDSVDGGGGSS-----SAISRSLSATADMRATASSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMDSSAGSSVGVSSVLGGPGGGTXXXXXXXXXXXXXXXXXXX--------------------------------DESRGVMVTSGRVAQQPTSGHHMSNGGIGRSASVGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AAIDDGYPTFGYRDPLTNMPGSGXXXXXXXXXXXXXXXXXXXXXXGPPPGMPMYAVHXXXXXXXXXXXXXNSGDAYGQGVVSHAPPPHAHAHNLQGGGLDNGPMSGVGDQQQLLAPHMNHMGSPPLPPMAAPQQPYMPSQGTYVVAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPMVLYQQQGGNGGAPQGQHXXXXXXXXHGQPGADQAAAASPMFLPMSQAGYGYVPQMAHLQAAGGVPVYQMAGGGIDGGQTNPRANGVASGGGXXXXXXXXXXXXXXX--RVSPLSPSVASPQPGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAIYDDGRAAGMGAMPGVSAVIDAGAGGGVEKGRLSPPLAAPMQQHPRFSGSPTHHPPHVHHPGGLQQ--QQQPMHAPAWSVGGGVHDVGGTPHMGYLDAGGGGYADGSGYRGGVXXXXXXXQDFIRGARTARDGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQV 753
            MDLGKRRISEDERERVSS HSNATDSVDG          S+ISRSLSATADMRAT SSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSM+SSAGSSVGVSSVLGGPG   XXXXXXXX XXXXXXXXXX                                DESRGVMVTSGRVA QPTSGHHMSNGGIGRSASVGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AAIDDGYPTFGYRDPLTNMPGSGXXXXXXXXXXXXXX        GPPPGMPMYAVH     XXXXXX  N GDAYGQGVVSHAPPPHAHAHNLQGGGLDNGPMSGVGDQQQLLAPHMNHMGSPPLPPMAAPQQPYMPSQGTYVVAAGD    XXXXXXXXXXXXXXXXXXXXX    MQPMVLYQQQGGNGGAPQGQHXXXXXX  HGQPGADQAAAASPMFLPMSQAGYGYVPQMAHLQAAGGVPVYQMAG GIDGGQ N RANG ASG  XXXXXXXXXXXXXXX  RVSPLSPSVASPQPGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGA+YDDGRAAGMGAMPGVSAV+DAG GGGVEKGRLSPPL APMQQHPRFSGSPTH PPHVHHPGGLQQ  QQQPMHAPAWSVGGGVHDVGG PHMGYLDAGGGGYADGSGYRGG XX     QDFIRGARTAR+GEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQV
Sbjct:    1 MDLGKRRISEDERERVSSHHSNATDSVDGXXXXXXXXXVSSISRSLSATADMRATVSSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMESSAGSSVGVSSVLGGPGXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGGDESRGVMVTSGRVAPQPTSGHHMSNGGIGRSASVGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIDDGYPTFGYRDPLTNMPGSGXXXXXXXXXXXXXXSP------GPPPGMPMYAVHSDGGVXXXXXXAVNGGDAYGQGVVSHAPPPHAHAHNLQGGGLDNGPMSGVGDQQQLLAPHMNHMGSPPLPPMAAPQQPYMPSQGTYVVAAGDGGGSXXXXXXXXXXXXXXXXXXXXX----MQPMVLYQQQGGNGGAPQGQHXXXXXX--HGQPGADQAAAASPMFLPMSQAGYGYVPQMAHLQAAGGVPVYQMAGAGIDGGQANARANGGASGXXXXXXXXXXXXXXXXXXGRVSPLSPSVASPQPGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGVGGGVEKGRLSPPLGAPMQQHPRFSGSPTHPPPHVHHPGGLQQPQQQQPMHAPAWSVGGGVHDVGGAPHMGYLDAGGGGYADGSGYRGGGXXPGGPVQDFIRGARTAREGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQV 784
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BLAST of mRNA_Ecto-sp13_S_contig15935.4358.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 511 bits (1316), Expect = 2.700e-168
Identity = 348/398 (87.44%), Postives = 351/398 (88.19%), Query Frame = 0 
Query:  360 MAAPQQPYMPSQGTYVVAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPMVLYQQQGGNGGAPQGQHXXXXXXXXH-GQPGADQAAAASPMFLPMSQAGYGYVPQMAHLQAAGGVPVYQMAGGGIDGGQTNPRANGVASGGGXXXXXXXXXXXXXXXRVSPLSPSVASPQPGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAIYDDGRAAGMGAMPGVSAVIDAGAGGGVEKGRLSPPLAAPMQQHPRFSGSPTHHPPHVHHPGGLQQQQQ---PMHAPAWSVGGGVHDVGGTPHMGYLDAGGGGYADGSGYRGGVXXXXXXXQDFIRGARTARDGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQV 753
            MAAPQQPYMPSQGTYVVAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     XXXXXXXX  GQPGADQAAAASPMFLPMSQAGYGYVPQMAHLQA GGVPVYQMAG GIDGGQ N RANGVASGGGXXXXXXXXXXXX   RVSPLSPSVASPQ GAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGA+YDDGRAAGMGAMPGVSAV+DAGAGGGVEKGRLSPPLAAPMQQHPRFSGSPTH PPHVH             PMHAPAWSVGGGVHDVGG PHMGYLDAGGGGYADGSGYRGG XXXXXXXQDFIRGARTAR+GEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQV
Sbjct:    1 MAAPQQPYMPSQGTYVVAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQPGADQAAAASPMFLPMSQAGYGYVPQMAHLQAGGGVPVYQMAGAGIDGGQANARANGVASGGGXXXXXXXXXXXXG--RVSPLSPSVASPQAGAPHPQSFQVHYAITPQGIVPMVPVVPNGAGGFTNPALYPGVGAMYDDGRAAGMGAMPGVSAVMDAGAGGGVEKGRLSPPLAAPMQQHPRFSGSPTHPPPHVHXXXXXXXXXXXXXPMHAPAWSVGGGVHDVGGAPHMGYLDAGGGGYADGSGYRGGGXXXXXXXQDFIRGARTAREGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSRDQV 396
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BLAST of mRNA_Ecto-sp13_S_contig15935.4358.1 vs. uniprot
Match: D7FSX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX5_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.010e-35
Identity = 93/110 (84.55%), Postives = 95/110 (86.36%), Query Frame = 0 
Query:    1 MDLGKRRISEDERERVSSLHSNATDSVDGGGGSS------SAISRSLSATADMRATASSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMDSSAGSSVGVSSVLGGPG 104
            MDLGKRRISEDERERVSS HSNATDSVDG           S+ISRSLSAT D+R T SSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMDSSAGSSVGVSSVLGGPG
Sbjct:  122 MDLGKRRISEDERERVSSHHSNATDSVDGXXXXXXXXXXVSSISRSLSATGDVRVTVSSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMDSSAGSSVGVSSVLGGPG 231
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15935.4358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JG61_9PHAE0.000e+087.19PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FSX6_ECTSI2.700e-16887.44PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FSX5_ECTSI1.010e-3584.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15935contigEcto-sp13_S_contig15935:6..3505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15935.4358.1mRNA_Ecto-sp13_S_contig15935.4358.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15935 6..3508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15935.4358.1 ID=prot_Ecto-sp13_S_contig15935.4358.1|Name=mRNA_Ecto-sp13_S_contig15935.4358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=753bp
MDLGKRRISEDERERVSSLHSNATDSVDGGGGSSSAISRSLSATADMRAT
ASSSDSALHLLAGGGVVASGVSSSGRGRPPSAGPSMDSSAGSSVGVSSVL
GGPGGGTGGSGGSGGGGVGASGGGGGDESRGVMVTSGRVAQQPTSGHHMS
NGGIGRSASVGAAGGGAGAGAGAGRGVGERERERDRDRRQSGGGGGGSYR
GHGGGSGGGGRSGGGGGGGGQAWIGSGAGAGAAIDDGYPTFGYRDPLTNM
PGSGGGGQQQQQQQQQQQQQQQHHSPGPPPGMPMYAVHSDGGVPIQPTYA
VNSGDAYGQGVVSHAPPPHAHAHNLQGGGLDNGPMSGVGDQQQLLAPHMN
HMGSPPLPPMAAPQQPYMPSQGTYVVAAGDGGGSNGVSSSGGSGGGGGGG
GGGSGGAGGMQPMVLYQQQGGNGGAPQGQHQHQHQHQHHGQPGADQAAAA
SPMFLPMSQAGYGYVPQMAHLQAAGGVPVYQMAGGGIDGGQTNPRANGVA
SGGGGGGGGGGGGGNGGNGRVSPLSPSVASPQPGAPHPQSFQVHYAITPQ
GIVPMVPVVPNGAGGFTNPALYPGVGAIYDDGRAAGMGAMPGVSAVIDAG
AGGGVEKGRLSPPLAAPMQQHPRFSGSPTHHPPHVHHPGGLQQQQQPMHA
PAWSVGGGVHDVGGTPHMGYLDAGGGGYADGSGYRGGVGGPGGPGQDFIR
GARTARDGEAGRDIKDRRKRLDRESDMAALLEATRPALKDVLGKVYSMSR
DQV
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