mRNA_Ecto-sp13_S_contig15932.4357.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: D8LPJ6_ECTSI (EsV-1-176 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ6_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 2.320e-172 Identity = 242/254 (95.28%), Postives = 252/254 (99.21%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLPAAAPASTEFRNAEGS+VPKEFALEARKNPEVISQMAE+PSEKR LEKEALARQYV+I+DRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSV NDYQPRG+TDLA+CLDVAMKTYLGKNRINFETVPGTTF+VILDGDADDRQAVKDVIRKYADPA+GF+ENHTNAAISFVQIADDPGATAFLKDLDDG+IGTPDICDFKVDNFLSEKDGVDRLLFDAIFD
Sbjct: 1 MKLPAAAPASTEFRNAEGSTVPKEFALEARKNPEVISQMAESPSEKRDLEKEALARQYVLIIDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVFNDYQPRGRTDLAKCLDVAMKTYLGKNRINFETVPGTTFLVILDGDADDRQAVKDVIRKYADPASGFVENHTNAAISFVQIADDPGATAFLKDLDDGIIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 254
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: Q8QNB1_ESV1K (EsV-1-176 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB1_ESV1K) HSP 1 Score: 370 bits (951), Expect = 1.420e-127 Identity = 182/254 (71.65%), Postives = 214/254 (84.25%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEK LEKEALARQYV+++DRSGSM W DG TTRWESARKAVEK+VE+ F YD D +P+YLFDD+VEFVGECT+S Q+V V +YQPRG TDLA+CL+VAM+ Y G+ R N+E PGTTF+V+LDG ADD+ AVK V+RK++DP +G++ NHT AISF+QIADDPGATAFL +LD G +G+PDI D K D+ LS G+D+L DAIFD
Sbjct: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKSALEKEALARQYVLLIDRSGSMGWADGSTTRWESARKAVEKLVEAAFIYDTDHRVPVYLFDDKVEFVGECTSSSQVVDVFKNYQPRGTTDLAQCLEVAMEEYAGRKRPNYEVCPGTTFIVVLDGCADDKDAVKRVLRKFSDPVSGYVANHTQLAISFLQIADDPGATAFLNELDRGFVGSPDIVDTKKDDILSLPGGIDKLFHDAIFD 254
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: A0A836CG78_9STRA (VWFA domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG78_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.040e-98 Identity = 149/254 (58.66%), Postives = 192/254 (75.59%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLP AP + F NA+GS+VP+EFA+ AR NP+VI QMAETP E + L+KEALARQYVIIVD SGSM+ DGK TRW+SAR AVEK+V+++F YD+D ++PLYLFD +V F+GE T + Q+ +V ++ PRG T L L A+ TY G R N++ VPGTTF+V+LDG ADD V V++++ADP NG+IENHT A+SFVQ+ DD A+AFL+ LDD + TPDICDFK D+ L++ G+DRLL DAIFD
Sbjct: 1 MKLPPVAPPAMHFINAKGSNVPQEFAIAARANPDVIPQMAETPKELQALQKEALARQYVIIVDMSGSMAARDGKGTRWDSARSAVEKMVDTIFAYDVDHTVPLYLFDSEVTFIGELTKASQVKAVFKEFGPRGTTGLGAALREALSTYAGTKRPNYQLVPGTTFIVLLDGGADDEADVMRVLQEFADPRNGYIENHTQIALSFVQVGDDASASAFLQKLDDSI--TPDICDFKRDDILTQLGGLDRLLHDAIFD 252
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: A0A835YYE7_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYE7_9STRA) HSP 1 Score: 293 bits (750), Expect = 4.870e-97 Identity = 147/254 (57.87%), Postives = 191/254 (75.20%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLP AP + F NA+GSSVPKEFA+ AR NP++I QMAET E + L +EALARQYV+IVD SGSM+ DG+ TRW+SAR AVEK+V+++F+YD+D ++PLYLFD QV FVGE T+ Q+ +V ++ PRG T L L A+ TY G R N+E VPGTTF+V+LDG ADD V V++++ADP +G++ NHT A+SF+QI DD GA+AFLK LDDG+ TPDICDF D+ LS+ G+D LL++AIFD
Sbjct: 1 MKLPPCAPPAMHFINAKGSSVPKEFAIAARTNPDMIPQMAETSKESKDLHREALARQYVVIVDMSGSMATRDGRGTRWDSARVAVEKMVDTIFEYDVDHTVPLYLFDSQVTFVGELTSPSQVKAVFKEFGPRGSTGLGPALREALGTYAGTKRPNYELVPGTTFIVLLDGGADDEGEVTRVLQEFADPKSGYVSNHTQLAVSFIQIGDDAGASAFLKRLDDGI--TPDICDFVKDDILSQSGGLDTLLYNAIFD 252
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: A0A835ZEJ5_9STRA (VWFA domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ5_9STRA) HSP 1 Score: 293 bits (749), Expect = 7.150e-97 Identity = 153/255 (60.00%), Postives = 186/255 (72.94%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGK-TTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLP AP ST F NA+GS VPKE+AL AR NP++I MAETP EK L+KEAL RQYV+IVDRSGSMS PDG TRW+SA A+EK+V+++F+YD+D +PLYLFD +V FVGE T+ Q+ + +++PRG T L + L A+ TY G R N+E VPGTTF+V+LDG ADD +AV I+ +ADPAN FI NHT AISFVQI DDP A FLK LDD PDICD K D+ L + G+DRLLFDAIFD
Sbjct: 1 MKLPPTAPPSTMFVNAQGSDVPKEYALPARSNPDLIVTMAETPKEKMDLQKEALVRQYVLIVDRSGSMSNPDGSGRTRWDSAGAAIEKMVDTIFQYDVDHQVPLYLFDSEVIFVGELTSPAQVRQIFKEFKPRGSTGLDKALHEALSTYAGTKRPNYEVVPGTTFIVLLDGGADDEEAVLRTIKYFADPANRFIANHTQIAISFVQIGDDPNAERFLKRLDD--TSDPDICDTKKDDILYQAGGLDRLLFDAIFD 253
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: B5LWN6_9PHYC (Putative von Willebrand factor n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN6_9PHYC) HSP 1 Score: 290 bits (742), Expect = 8.270e-96 Identity = 152/256 (59.38%), Postives = 193/256 (75.39%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGKT-TRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDG-VDRLLFDAIFD 762
MKLP + AST F NAEGS+VPKEFAL AR NPE I QMAE+ +E ++LEKEAL RQ+V+++DRSGSM WPDG TRWE A++ + +V S+FKYD+D SIPL+LFD +V FVGECTN+ QI +V +YQP T+L+ L+ AM+ YLG R+N+E VPGTTF+V+LDG AD+ V V++KYADPANG+I NHT AA+SFVQIADD AT FL+ LD+ + DI D K D+F+ DG VD+LL DA+FD
Sbjct: 1 MKLPVSE-ASTTFANAEGSAVPKEFALAARSNPEQIPQMAESAAETKMLEKEALVRQFVLLIDRSGSMGWPDGDDKTRWERAKEVTKALVPSLFKYDVDKSIPLFLFDSEVSFVGECTNASQIETVFTEYQPGTTTNLSGALEQAMEMYLGSKRVNYEVVPGTTFIVLLDGGADNPDEVVQVLQKYADPANGYISNHTQAAVSFVQIADDISATMFLRSLDE--LKPLDIVDTKKDDFIFSTDGGVDKLLHDAVFD 253
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: A0A835YR58_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR58_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.470e-91 Identity = 149/255 (58.43%), Postives = 180/255 (70.59%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGK-TTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLP AA ST F NA+GS VPKEFAL AR NP++I+ MAETP EK L++EAL RQYV+IVDRSGSM+ PD TRW+SA AVE +V+++FKYD D +PLYLFD +V VGE T+ Q+ V +Y+PRG T L + L A+ TY G R N+E VPGTTF+V+LDG ADD + V IR +ADPAN FI NHT A+SFVQI DDP A FL LD+ PDICD K D+ L + G+DRLL DAIFD
Sbjct: 1 MKLPPAAALSTMFVNAQGSDVPKEFALPARSNPDLIATMAETPKEKTTLQREALIRQYVLIVDRSGSMAAPDRNGRTRWDSAGVAVENMVDTIFKYDNDHQVPLYLFDSEVTSVGELTSPSQVKQVFREYRPRGSTGLDKALHEALNTYAGTKRPNYEVVPGTTFIVLLDGSADDEEPVMRTIRYFADPANKFIANHTQIALSFVQIGDDPNAERFLNCLDE--TAEPDICDTKKDDILYQAGGLDRLLHDAIFD 253
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: A0A836CHH8_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH8_9STRA) HSP 1 Score: 278 bits (711), Expect = 4.070e-91 Identity = 137/254 (53.94%), Postives = 188/254 (74.02%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLP+A T+F NA+GS VP+E+A+ AR +P+ I MAET +E + L+KEALARQYVIIVDRSGSM+ DG+ TRW+SAR AV K+++++FKYD+D ++P+Y+FD++ F+GE T + Q+ + +++PRG TDL L A++TY G R N+ +PGTTF+V+LDG ADD +AV +R +ADP NG++ NHT A+SF+QI DD GAT FLK LDD + PDICD K D+ L G+D+LL+DAIFD
Sbjct: 1 MKLPSAPAPRTQFVNAQGSHVPQEYAIAARADPDCIKDMAETSNELKDLQKEALARQYVIIVDRSGSMAASDGRGTRWDSARDAVAKMIDTIFKYDVDHTVPVYVFDNESVFIGEVTKASQVKQIFTEFKPRGTTDLNNVLVEAIETYAGTKRPNYSLIPGTTFIVLLDGGADDEEAVMRSLRHFADPRNGYVANHTQIALSFLQIGDDAGATRFLKRLDDEI--EPDICDTKKDDVLKTSGGLDQLLYDAIFD 252
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: A0A835Z7E0_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E0_9STRA) HSP 1 Score: 272 bits (696), Expect = 7.690e-89 Identity = 138/254 (54.33%), Postives = 182/254 (71.65%), Query Frame = 1
Query: 1 MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGKTTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
MKLP + ST F NA+GS+V +E+A+ AR NP+ I MAETP E + L+KEALARQYVIIVDRSGSM DG+ T W+SAR AV +++++V YDID ++P+Y+FD++ F+GE T + Q+ + +++PRG TDL L A++TY G R N+E VPGTTF+V+LDG ADD AV + ++ADP NG++ NHT AIS QI DDP AT FLK LDD + PDICD + D+ LSE G+DRLL+ AIFD
Sbjct: 1 MKLPPPSAPSTTFVNAKGSNVIQEYAIAARANPDCIPTMAETPRELKDLQKEALARQYVIIVDRSGSMGAADGRGTHWDSARDAVTRMIDTVLNYDIDHTVPVYIFDNECVFIGEVTKASQVKQIFTEFKPRGTTDLNNVLVEALETYAGTKRPNYELVPGTTFIVLLDGGADDEDAVMKTVCRFADPRNGYVANHTQIAISLCQIGDDPSATRFLKRLDDEI--EPDICDTQKDDILSETGGLDRLLYSAIFD 252
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Match: A0A835ZDC5_9STRA (VWFA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC5_9STRA) HSP 1 Score: 262 bits (670), Expect = 1.070e-84 Identity = 140/254 (55.12%), Postives = 179/254 (70.47%), Query Frame = 1
Query: 4 KLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEKEALARQYVIIVDRSGSMSWPDGK-TTRWESARKAVEKIVESVFKYDIDGSIPLYLFDDQVEFVGECTNSGQIVSVCNDYQPRGKTDLARCLDVAMKTYLGKNRINFETVPGTTFVVILDGDADDRQAVKDVIRKYADPANGFIENHTNAAISFVQIADDPGATAFLKDLDDGVIGTPDICDFKVDNFLSEKDGVDRLLFDAIFD 762
+LP A +TEF NA+GS VPK++AL AR NP++I MA+T +E L+KEALARQYV+IVD+S SM W DG TRW+SAR AVE +V ++F++DID ++PLY FD V+FVGE T++ Q+ +Y P G T+L L A+ TY G R N+E VPGTTF+V+LDG ADD AV IR +ADPANG+I NHT AIS VQI DD A FLK LD+ V PDICD K D+ L + G+D++L+DAIFD
Sbjct: 15 QLPPAPAPATEFVNAKGSDVPKQYALAARANPDLIHTMADTSTELSDLKKEALARQYVLIVDKSTSMGWGDGAGKTRWDSARAAVETMVLTIFEHDIDHTVPLYFFDRNVDFVGELTSASQVQQAFREYSPGGSTNLDAALLEALGTYAGTKRPNYELVPGTTFIVLLDGGADDESAVLRTIRHFADPANGYIANHTQIAISLVQIGDDDVAERFLKTLDNTV--DPDICDTKKDDILYQAGGIDKMLYDAIFD 266 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15932.4357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15932.4357.1 >prot_Ecto-sp13_S_contig15932.4357.1 ID=prot_Ecto-sp13_S_contig15932.4357.1|Name=mRNA_Ecto-sp13_S_contig15932.4357.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp MKLPAAAPASTEFRNAEGSSVPKEFALEARKNPEVISQMAETPSEKRVLEback to top mRNA from alignment at Ecto-sp13_S_contig15932:2979..3743- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15932.4357.1 ID=mRNA_Ecto-sp13_S_contig15932.4357.1|Name=mRNA_Ecto-sp13_S_contig15932.4357.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15932:2979..3743- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15932:2979..3743- >mRNA_Ecto-sp13_S_contig15932.4357.1 ID=mRNA_Ecto-sp13_S_contig15932.4357.1|Name=mRNA_Ecto-sp13_S_contig15932.4357.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15932:2979..3743- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |