prot_Ecto-sp13_S_contig15931.4354.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15931.4354.1
Unique Nameprot_Ecto-sp13_S_contig15931.4354.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length401
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15931.4354.1 vs. uniprot
Match: A0A6H5L705_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L705_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.350e-47
Identity = 128/178 (71.91%), Postives = 128/178 (71.91%), Query Frame = 0 
Query:  224 MRSRALSKATRSGARPLLFLSSKGIPNRHEIVRAFSESAGTNIVGRDGDSGSCGSGGGGGRDCSNXXXXXXXXDGDRGRAGGWRRWGGTATVGAGRAXXXXXXXXVGRRRLDELDAGSRRRGRRWLLTLARFMARPREFELRRAAAVRAFTPQKFRQEWELFWELVDPVFDGLEKTTK 401
            MRSRALSKATRSGARPLLFLSSKGIPNRHEIVRAF ESAGTN  GRD  SGSC            XXXXXXXX                        XXXXXXXX     LDELD  SRRRGRRWLLTLARFMARPREFELRRAAAVR FTPQKFRQEWELFWELVDPVFDGLEK TK
Sbjct:    1 MRSRALSKATRSGARPLLFLSSKGIPNRHEIVRAFLESAGTNNGGRDDYSGSC-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDELDERSRRRGRRWLLTLARFMARPREFELRRAAAVRTFTPQKFRQEWELFWELVDPVFDGLEKATK 171
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BLAST of mRNA_Ecto-sp13_S_contig15931.4354.1 vs. uniprot
Match: D8LLQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ7_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.760e-20
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 
Query:  356 MARPREFELRRAAAVRAFTPQKFRQEWELFWELVDPVFDGLEKTTK 401
            MARPREFELRRAAAVRAFTPQKFRQEWELFWELVDPVFDGLEKTT+
Sbjct:    1 MARPREFELRRAAAVRAFTPQKFRQEWELFWELVDPVFDGLEKTTE 46
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15931.4354.1 vs. uniprot
Match: A0A6H5L884_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L884_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 8.090e-5
Identity = 26/27 (96.30%), Postives = 26/27 (96.30%), Query Frame = 0 
Query:    1 MQRLVSKPEEGGGTRQEWLDCLREMVE 27
            MQRLVSKPEE GGTRQEWLDCLREMVE
Sbjct:  322 MQRLVSKPEECGGTRQEWLDCLREMVE 348
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15931.4354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L705_9PHAE2.350e-4771.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLQ7_ECTSI1.760e-2097.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L884_9PHAE8.090e-596.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15931contigEcto-sp13_S_contig15931:696..3759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15931.4354.1mRNA_Ecto-sp13_S_contig15931.4354.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15931 696..3767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15931.4354.1 ID=prot_Ecto-sp13_S_contig15931.4354.1|Name=mRNA_Ecto-sp13_S_contig15931.4354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=401bp
MQRLVSKPEEGGGTRQEWLDCLREMVEAHKLSRKSRPTPPTPPSRLRVYE
GDGRRGGGGGGEPSFPSLFAAARTSASLPAGSPAAATADGVGGARAATTT
PAVPPAHTRTRSGSSSSSSVSASGSAYSGGPPHDEAFPFLPSQHVGQRPS
RSSATASSLGNGQRSATAGGGGGGGGGGLPRGRELRRLAKKIGALLRDFS
PSSSLEAFEVEEARLRLWVAANIMRSRALSKATRSGARPLLFLSSKGIPN
RHEIVRAFSESAGTNIVGRDGDSGSCGSGGGGGRDCSNGSCSGGGDDGDR
GRAGGWRRWGGTATVGAGRAAAAAAAAAVGRRRLDELDAGSRRRGRRWLL
TLARFMARPREFELRRAAAVRAFTPQKFRQEWELFWELVDPVFDGLEKTT
K
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