mRNA_Ecto-sp13_S_contig15929.4350.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: D7G890_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G890_ECTSI) HSP 1 Score: 351 bits (901), Expect = 2.390e-115 Identity = 180/202 (89.11%), Postives = 189/202 (93.56%), Query Frame = 1
Query: 1 MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLKALRNDERLELTEWDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGSH 606
MAD+AVIVLGVMAQIRDFAK IKENDRQACRLIERVKAIEPAVL VKQGTN SSS+SLRQLL TVEMIRNFL GYA+MS FNRALKRKS ASEFTQFG+ + EGVQALSLD+AVD WAKEDAADRLDDLENMVD +ERMERNRTENHAEILGVLKALR DERLELTEWDEIDYDKDLDF GS++LGSGGFGEVCTAKWNGSH
Sbjct: 1 MADVAVIVLGVMAQIRDFAKDIKENDRQACRLIERVKAIEPAVLAVKQGTNMSSSESLRQLLGTVEMIRNFLGGYARMSNFNRALKRKSNASEFTQFGIHINEGVQALSLDIAVDAWAKEDAADRLDDLENMVDTMERMERNRTENHAEILGVLKALRKDERLELTEWDEIDYDKDLDFKGSSRLGSGGFGEVCTAKWNGSH 202
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: D7G887_ECTSI (Protein kinase, TKL group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G887_ECTSI) HSP 1 Score: 306 bits (783), Expect = 2.240e-101 Identity = 166/202 (82.18%), Postives = 173/202 (85.64%), Query Frame = 1
Query: 1 MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLK--------------ALRNDERLELTEWDEIDYDKDLDFDGSTQLGSG 564
MAD+AVIVLGVMAQIRD K IKENDRQACRLIERVKAI+PAVL VKQGTNTSSSDSL QLLATV+MIRNFLEGYAQMSKFNRALKRK+ ASEFTQFGV LTEGVQ LSLDVAVD WAKEDAADRLDDLENMVDI+ERMERNRTEN AEILGVLK ALR DER ELTEWDEIDYDKDLDF GS++ G G
Sbjct: 1 MADVAVIVLGVMAQIRDIVKDIKENDRQACRLIERVKAIQPAVLAVKQGTNTSSSDSLSQLLATVDMIRNFLEGYAQMSKFNRALKRKANASEFTQFGVLLTEGVQTLSLDVAVDAWAKEDAADRLDDLENMVDIMERMERNRTENQAEILGVLKCEHHADWLHVRTFQALRKDERSELTEWDEIDYDKDLDFKGSSRSGRG 202
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: A0A6H5K368_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K368_9PHAE) HSP 1 Score: 264 bits (675), Expect = 2.360e-86 Identity = 138/201 (68.66%), Postives = 166/201 (82.59%), Query Frame = 1
Query: 1 MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLKALRNDERLELTEWDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGS 603
MAD+AV++L V+ +IR A+G +ENDRQA L +RV A++P VL V++GT SSS++LRQLLATVE IRNFL GYAQ SKFNRALKRK+ A +FTQ G LTE VQAL LDVAVD WAKEDA+DRL DL+NMVD +ERMER+RT+NHAE++ VL+ALRNDER ELT W EIDY +DLDF+GST LG+GG GEV T KWNG+
Sbjct: 15 MADVAVVILHVVDEIRKVAEGTRENDRQA--LFKRVLAVQPPVLAVREGTKLSSSEALRQLLATVEKIRNFLGGYAQTSKFNRALKRKANADQFTQLGDILTEEVQALQLDVAVDAWAKEDASDRLADLDNMVDTMERMERSRTDNHAEVMSVLQALRNDERAELTGWVEIDYSEDLDFEGSTILGAGGVGEVRTVKWNGA 213
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: A0A6H5JLJ5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLJ5_9PHAE) HSP 1 Score: 271 bits (694), Expect = 1.080e-83 Identity = 141/201 (70.15%), Postives = 165/201 (82.09%), Query Frame = 1
Query: 1 MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLKALRNDERLELTEWDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGS 603
MAD+AV VL V+ +IR+ A+ IKENDRQA RL +RV AIEP V+ VK+G+ SSS+SL +LL VE IRNFLEGYA+ + FNRALKRK+ A F + V LTEG+QAL LD+AVD WA EDA+DRLDDLENM+DI+ERME NRT+NHAE++GVLKALR DER ELT W EIDYDKDLDF GST LGSGGFGEV TAKWNG+
Sbjct: 1 MADVAVAVLRVVTEIRNVAERIKENDRQARRLSDRVTAIEPPVIAVKKGSKMSSSESLHRLLFAVEEIRNFLEGYARTTNFNRALKRKANADSFAKLSVMLTEGMQALQLDIAVDAWATEDASDRLDDLENMMDIMERMESNRTDNHAEVMGVLKALRQDERTELTGWVEIDYDKDLDFGGSTLLGSGGFGEVRTAKWNGA 201
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: D8LQ15_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ15_ECTSI) HSP 1 Score: 273 bits (697), Expect = 3.730e-83 Identity = 143/201 (71.14%), Postives = 166/201 (82.59%), Query Frame = 1
Query: 1 MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLKALRNDERLELTEWDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGS 603
M D+AV++L V+A+I D A+GI EN RQA RL++R AIE VL V GT SSS+SLRQL ATVE IRNFLEGYA+ +K NRALKRKS A++FTQ GV LTEG+ AL LDVAVD WA EDA+DRL+DLENMVD++E MERNRTENHAE++ VLK LRNDER ELT W EIDY++DLDFDGST LGSGGFGEV TAKWNG+
Sbjct: 1 MVDVAVVILRVVAEIHDVAEGINENHRQARRLLKRAMAIETPVLAVHNGTILSSSESLRQLSATVENIRNFLEGYARTTKLNRALKRKSNAAKFTQLGVNLTEGMHALQLDVAVDAWANEDASDRLEDLENMVDMMEIMERNRTENHAEVMDVLKTLRNDERSELTGWIEIDYEQDLDFDGSTLLGSGGFGEVRTAKWNGA 201
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE) HSP 1 Score: 259 bits (661), Expect = 8.630e-77 Identity = 130/201 (64.68%), Postives = 165/201 (82.09%), Query Frame = 1
Query: 1 MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLKALRNDERLELTEWDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGS 603
M D+AV+VL V+A++RD A+ + ENDRQACRL++R AIE VL V+ GT+ +S+DSLRQLL TVE IRNFLE YA+M+KFNRAL R+S A+EF + G+ LTEG+QAL L+VAVD WAKEDA+DR +D+ENM+D++E ++RN+T+ HAE++ VLKALR DER EL W EIDY+KDLDFDGS LG GGFGEV TAKW G+
Sbjct: 1 MVDVAVVVLRVLAEVRDVAEDVMENDRQACRLLKRALAIEAPVLAVQNGTSLTSADSLRQLLTTVEKIRNFLEEYARMTKFNRALNRRSNAAEFMRLGLNLTEGMQALHLEVAVDVWAKEDASDRQEDIENMLDMMETVKRNQTDKHAEVMNVLKALRKDERSELAGWIEIDYEKDLDFDGSALLGWGGFGEVRTAKWKGA 201
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: A0A6H5KS20_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS20_9PHAE) HSP 1 Score: 202 bits (513), Expect = 5.150e-57 Identity = 111/200 (55.50%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 13 AVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLKALRNDERLELTE---WDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGS 603
A+ +L V+A+IR A+GI+END QA RL ERVKAI+P VL VK G S +SLRQL +E IRNFL GYA+ + NR +R+S AS F F L+EG+QAL +DV VD WAK+D +DRL+D+ N+ R ERNR +N AE L L DER EL E W EID+D DLDF+GS +LGSG FGEV TA+WNGS
Sbjct: 61 AITILQVLAEIRGVAEGIQENDEQAHRLSERVKAIQPGVLAVKNGKRGVSPESLRQLFEALEAIRNFLHGYARSNFLNRIWRRRSNASRFRVFSHDLSEGMQALQMDVLVDVWAKQDVSDRLEDIANLKHEARRGERNRNDNRAEFSRALAELEKDERSELKELSAWVEIDFDNDLDFEGSIRLGSGSFGEVKTARWNGS 260
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: A0A6H5KGQ4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ4_9PHAE) HSP 1 Score: 199 bits (505), Expect = 6.450e-57 Identity = 112/200 (56.00%), Postives = 136/200 (68.00%), Query Frame = 1
Query: 13 AVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDLENMVDIIERMERNRTENHAEILGVLKALRNDERLELTE---WDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGS 603
A+ VL V+A+IR A+GI+END QA RL ERVKAI+P VL VK G S +SLRQL +E IRNFL GYA+ + NR +R+S AS F F LTEG+QAL +DV VD WAK+D +DRL+D+ N+ + ERN + N AE L L DER EL E W+EIDYD DLDF+GS +LGSG FG V TAKWNGS
Sbjct: 8 AITVLQVVAEIRGVAEGIQENDEQAHRLSERVKAIQPGVLAVKNGKRGVSPESLRQLFEALEAIRNFLHGYARSNFLNRVWRRRSNASRFRAFSHDLTEGMQALQMDVLVDVWAKQDVSDRLEDIANLKHAMRIGERN-SNNRAEFSRALTELEKDERSELKELSAWEEIDYDNDLDFEGSIRLGSGSFGVVTTAKWNGS 206
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: D7FHK4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK4_ECTSI) HSP 1 Score: 115 bits (288), Expect = 1.270e-28 Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 394 MVDIIERMERNRTENHAEILGVLKALRNDERLELTEWDEIDYDKDLDFDGSTQLGSGGFGEVCTAKWNGS 603
MVDI+ERME NRTENHAE L VLKALRNDER ELT WDEIDYDKDLDF+GST+ GSGG GEV T KWNGS
Sbjct: 1 MVDIMERMEHNRTENHAETLRVLKALRNDERSELTAWDEIDYDKDLDFEGSTRFGSGGVGEVRTVKWNGS 70
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Match: D7FYC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC4_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 3.800e-17 Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = 1
Query: 1 MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTV-KQGTNTSSSDSLRQLLATVEMIRNFLEGYAQMSKFNRALKRKSRASEFTQFGVFLTEGVQALSLDVAVDTWAKEDAADRLDDL 387
+ +I ++L + I +G+KEN+R A +L+E V+AIEP + + K+GT S S+SLRQLL TV+ IR L+ YA+ RALKRK A +F G LT+ + A+ L D ADRLDD+
Sbjct: 14 VVNIVELILECVDSIGSIVRGMKENNRHASQLLEIVEAIEPPIRAIQKKGTTLSGSESLRQLLETVQEIRTVLDEYARTCIVARALKRKKIAKKFAWLGNNLTQKMHAVQLG---------DIADRLDDV 134 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15929.4350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15929.4350.1 >prot_Ecto-sp13_S_contig15929.4350.1 ID=prot_Ecto-sp13_S_contig15929.4350.1|Name=mRNA_Ecto-sp13_S_contig15929.4350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp MADIAVIVLGVMAQIRDFAKGIKENDRQACRLIERVKAIEPAVLTVKQGTback to top mRNA from alignment at Ecto-sp13_S_contig15929:191..1128- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15929.4350.1 ID=mRNA_Ecto-sp13_S_contig15929.4350.1|Name=mRNA_Ecto-sp13_S_contig15929.4350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=938bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15929:191..1128- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15929:191..1128- >mRNA_Ecto-sp13_S_contig15929.4350.1 ID=mRNA_Ecto-sp13_S_contig15929.4350.1|Name=mRNA_Ecto-sp13_S_contig15929.4350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15929:191..1128- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |