mRNA_Ecto-sp13_S_contig1592.4348.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: D7G7C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI) HSP 1 Score: 754 bits (1948), Expect = 1.230e-256 Identity = 489/586 (83.45%), Postives = 498/586 (84.98%), Query Frame = 1
Query: 1282 QSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGKRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTXXXXXXXXXTE--VVQRTARPFPMSANPYLARILPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEGPGDGHFLGGVVVDGGGAPEQHEESVEVEDRHRDGSIDDGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGIDDHDXGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAEGVMVGPVATAEEEVDPGQDFVMPLAKRARIDDGDXXXXXXXXXXXPGGEGHHMLIDGSGVGSAGVGDVEDENTVADSFVGSGFGSDEHPAVDAGGGXXXXXXXDGGRIDHDVVGAGSGVMDHFGATEIGXXXXXXXXXXXXSLERFGDARTIGDXXXXXXXXXXXXXXVDNGGGSLSAVARLEEHHRHHPGIGSDGEGGHDGVDGGDADCVFPGWDRLRNEDPKMH 3033
QSLRLRQLVEERQ+VVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGK+WSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRAST T VVQRTARPFPMSANPYL ++L AAP GPGDGHFLGGVVVD GGAPEQHEESVEVEDRHRDGSIDDGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXX +DDHD GDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDA GV+VGPV +AEEEVDP QDF +PLAKRARID GDXXXXXXXXX PGGEGH MLIDGSGV S GVGDVEDENTVADSFVGSGFGSD+H AVDAG XXXXXXX RID DVVGAGSGVMDHFGA XXXXXXXXXX LERF DA TIGD XXXXXXXXXXXXVDNGGGS SA ARLEEHHRHH GIGSDGEGGHDGVDGGDADCVFPGWDRLR EDPKMH
Sbjct: 369 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAATATGTPPIVVQRTARPFPMSANPYLRQVL----------SESKHGGEHHHSGGVGGVLLERPQEPPISAAPGGPGDGHFLGGVVVDCGGAPEQHEESVEVEDRHRDGSIDDGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXXMDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVLVGPVPSAEEEVDPEQDFGLPLAKRARIDGGDXXXXXXXXXD-PGGEGHDMLIDGSGVSSVGVGDVEDENTVADSFVGSGFGSDDHAAVDAGXXXXXXXXXX--RIDDDVVGAGSGVMDHFGAXXX--XXXXXXXXXXGGLERFEDAGTIGDGDXXXXXXXXXXXXVDNGGGSPSAAARLEEHHRHHAGIGSDGEGGHDGVDGGDADCVFPGWDRLRTEDPKMH 939
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: A0A6H5KNI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI5_9PHAE) HSP 1 Score: 562 bits (1448), Expect = 1.070e-186 Identity = 445/643 (69.21%), Postives = 455/643 (70.76%), Query Frame = 1
Query: 1246 MPPVVYQRWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGKRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTXXXXXXXXXTE--VVQRTARPFPMSANPYLARILPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----------------APEGP----------------------------GDGHFLGGVVVDGGGAPEQHEESVEVEDRHRDGSIDDGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGIDDHDXGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAEGVMVGPVATAEEEVDPGQDFVMPLAKRARIDDGDXXXXXXXXXXXPGGEGHHMLIDGSGVGSAGVGDVEDENTVADSFVGSGFGSDEHPAVDAGGGXXXXXXXDGGRIDHDVVGAGSGVMDHFGATEIGXXXXXXXXXXXXSLERFGDARTIGDXXXXXXXXXXXXXXVDNGGGSLSAVARLEEHHRHHPGIGSDGEGGHDGVDGGDADCVFPGWDRLRNEDPKMH 3033
MPPVVYQRWTQEQSLRLRQLVEER++VVGTSGAKDWTNIARK LVEHHGK+WSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEE VR W + LP + + YAHERRQREISRAS XX T VVQRTARPFPMSANPYLARILPAP XXXXXXXXXXXXXXXXXXX + +G GD HFLG APEQHEESVEVEDRH DGSIDDGLLLQQPAGDYDPTHVAGSGG XXXXXXXXXXGIDDHD GDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDA GVMVGPVATAEEEVDPGQDF +PLAKRARID GDXXXXXXXXXXXPGGEGHHMLIDGSGVGSAGVGDVEDENTVADSFVGSGFGSDEHPAVDAGG XXXXX G RID DVVGAGSGVMDHF ATEIGXXXXX LERF A TIGD XXXXXXXXXXXXXVDNGGGSLSAVARLEEHHRHH GIGSD GDADCVFPGWDRLR+EDPKMH
Sbjct: 1 MPPVVYQRWTQEQSLRLRQLVEERRLVVGTSGAKDWTNIARK--------------------------------------LVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEE----VR--------WLSVI--LPVHIPVPV-HMLYAHERRQREISRASASSTXXAATETPPIVVQRTARPFPMSANPYLARILPAPPPPVLVSAPLAASPVASXXXXXXXXXXXXXXXXXXXXXXXDIPPLIEQRQVLSESEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDCHFLGXXXXXXXXAPEQHEESVEVEDRHGDGSIDDGLLLQQPAGDYDPTHVAGSGGDGGHXXXXXXXXXXGIDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVMVGPVATAEEEVDPGQDFGLPLAKRARIDGGDXXXXXXXXXXXPGGEGHHMLIDGSGVGSAGVGDVEDENTVADSFVGSGFGSDEHPAVDAGG---XXXXXXGDRIDDDVVGAGSGVMDHFSATEIGXXXXXGEDGG--GLERFEQAGTIGDGXXXXXXXXXXXXXVDNGGGSLSAVARLEEHHRHHAGIGSDXXXXXXXXXXGDADCVFPGWDRLRSEDPKMH 585
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: P10242-12 (Isoform 12 of Transcriptional activator Myb n=7 Tax=Hominidae TaxID=9604 RepID=P10242-12) HSP 1 Score: 154 bits (388), Expect = 1.690e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: A0A2K6DQZ6_MACNE (MYB proto-oncogene, transcription factor n=6 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K6DQZ6_MACNE) HSP 1 Score: 154 bits (388), Expect = 2.670e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: A0A2K5ZVK3_MANLE (MYB proto-oncogene, transcription factor n=8 Tax=Catarrhini TaxID=9526 RepID=A0A2K5ZVK3_MANLE) HSP 1 Score: 154 bits (388), Expect = 2.740e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 43 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 195
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: Q708E6_HUMAN (C-myb v-myb myeloblastosis viral oncogene homologue (avian), exon 1 and joined CDS n=4 Tax=Hominidae TaxID=9604 RepID=Q708E6_HUMAN) HSP 1 Score: 154 bits (388), Expect = 3.010e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: Q708E8_HUMAN (C-myb v-myb myeloblastosis viral oncogene homologue (avian), exon 1 and joined CDS n=10 Tax=Hominoidea TaxID=314295 RepID=Q708E8_HUMAN) HSP 1 Score: 154 bits (388), Expect = 3.230e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: A0A7J8KCY8_ROUAE (MYB proto-oncogene, transcription factor n=3 Tax=Chiroptera TaxID=9397 RepID=A0A7J8KCY8_ROUAE) HSP 1 Score: 154 bits (388), Expect = 3.310e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: A0A2K6U084_SAIBB (MYB proto-oncogene, transcription factor n=4 Tax=Platyrrhini TaxID=9479 RepID=A0A2K6U084_SAIBB) HSP 1 Score: 153 bits (387), Expect = 3.540e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 40 RWTREEDEKLKKLVEQ-------NGTDDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 192
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Match: A0A8C8ZFN0_PROSS (MYB proto-oncogene, transcription factor n=2 Tax=Prolemur simus TaxID=1328070 RepID=A0A8C8ZFN0_PROSS) HSP 1 Score: 154 bits (388), Expect = 3.540e-37 Identity = 80/168 (47.62%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 1267 RWTQEQSLRLRQLVEERQMVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHG-KRWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 1767
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+I+LV+ +G KRWSVIA LK R+GKQ RER+ +HL+P +KK W+ EE+ I+ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1592.4348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1592.4348.1 >prot_Ecto-sp13_S_contig1592.4348.1 ID=prot_Ecto-sp13_S_contig1592.4348.1|Name=mRNA_Ecto-sp13_S_contig1592.4348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1012bp GLGGHGVEEDDHLGLMKAAAEQSAAEQKQADEELAEAVMREAAADHSLGVback to top mRNA from alignment at Ecto-sp13_S_contig1592:8462..14897- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1592.4348.1 ID=mRNA_Ecto-sp13_S_contig1592.4348.1|Name=mRNA_Ecto-sp13_S_contig1592.4348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6436bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1592:8462..14897- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1592:8462..14897- >mRNA_Ecto-sp13_S_contig1592.4348.1 ID=mRNA_Ecto-sp13_S_contig1592.4348.1|Name=mRNA_Ecto-sp13_S_contig1592.4348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3036bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1592:8462..14897- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |