mRNA_Ecto-sp13_S_contig15915.4345.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI) HSP 1 Score: 379 bits (974), Expect = 3.830e-131 Identity = 199/205 (97.07%), Postives = 201/205 (98.05%), Query Frame = 1
Query: 1 VLRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGVGHGXXXXXASDIERFRKRGGAGGFGASGGLRGDC 615
+LRQELRKCSEFFTGVEGQL VRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVV NAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGVGHGXXXXXAS IERFR+RGGAG FGASGGLRGDC
Sbjct: 67 LLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGEGVGHGXXXXXASGIERFRRRGGAGRFGASGGLRGDC 271
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A6H5L5H8_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H8_9PHAE) HSP 1 Score: 286 bits (731), Expect = 1.580e-94 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
Query: 73 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 504
ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG
Sbjct: 11 ARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG 154
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.300e-51 Identity = 94/150 (62.67%), Postives = 108/150 (72.00%), Query Frame = 1
Query: 4 LRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLL-LPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVN-NAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTM 447
LRQELRKC EFF E Q VR+ARV EGWRQL +P V V+G KRLMAACV+LYKDLLLLENFAIMNY FSKILKKHDKLTGF TRE +MKNVVN F YP+V++ML VE LF+ I++ + + + EEQLFID M
Sbjct: 74 LRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVPVDGEQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGIQTHANIAHSS-------EEQLFIDAM 216
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A4D9D3X8_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X8_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.670e-39 Identity = 77/168 (45.83%), Postives = 107/168 (63.69%), Query Frame = 1
Query: 4 LRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINTEAFRLQQAEGADIG 504
LR E+ K SEF+ G+E Q+ R+ R+ G + L P V+E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FM+NVVN PF YP++++ML +E +FK I++L A PL EE+ LF++ + +N EA +Q+ E AD+G
Sbjct: 81 LRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLG 243
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: W7TGL0_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL0_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.080e-38 Identity = 77/168 (45.83%), Postives = 107/168 (63.69%), Query Frame = 1
Query: 4 LRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINTEAFRLQQAEGADIG 504
LR E+ K SEF+ G+E Q+ R+ R+ G + L P V+E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FM+NVVN PF YP++++ML +E +FK I++L A PL EE+ LF++ + +N EA +Q+ E AD+G
Sbjct: 81 LRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADLG 243
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A7R9YCT0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCT0_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.850e-34 Identity = 89/224 (39.73%), Postives = 116/224 (51.79%), Query Frame = 1
Query: 4 LRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLP---------------------------NVVVEGNPNKR-LMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIES--------LPS----ASAEAGTR---------------VPLREE-QLFIDTMLTINTEAFRLQQAEGADIGE 507
L ELRK EF+ G E + +R +RV EG RQLL P V NP +R ++ACV++YKDLLLLE +AIM+YC FSKILKKHDK+TG+ TR +M VVN PF +Y V+KML E+LFK + + LPS + +AG R +PL EE QLFID + +N EA L + E ++ E
Sbjct: 68 LMAELRKTEEFYKGAETEFRIRISRVREGVRQLLEPAYRPVEPETSTDDSDSADASHAPVAGGEAVAPENPKRRRALSACVRIYKDLLLLETYAIMSYCAFSKILKKHDKVTGYTTRTQYMSRVVNPKPFTKYKGVVKMLRDCESLFKILTTQTEGPDAELPSPRRRTNKQAGARDALSLSDWSDEMRSKLPLHEEEQLFIDVIRNLNNEATSLMRDEQKEVEE 291
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A7S2A9F4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9F4_TRICV) HSP 1 Score: 132 bits (333), Expect = 4.070e-33 Identity = 69/171 (40.35%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 1 VLRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGA-DIGEG 510
+L E +K FF + + +R+ R+ EG + PN ++ L + +LYKDLLLLE FAIM YC FSKILKKHDK+TG+ TR +FM NVVN A F YP V+ M+S EAL++ + + + G +E+LFI+ + +N++ ++AEGA D+ +G
Sbjct: 153 LLHSEFKKAVHFFERAQEEFSIREGRIREGMEIMKKPNSIMVSEKWSLLAKSLHRLYKDLLLLETFAIMTYCSFSKILKKHDKVTGYETRNAFMTNVVNRANFTNYPDVLSMISRCEALYEEVSQHLISEGKEGL---CEDERLFINMIHRLNSQVMDTREAEGAPDLKDG 320
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A7S2D364_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D364_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.340e-33 Identity = 72/167 (43.11%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 4 LRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFV-QYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLR-EEQLFIDTMLTINTEAFRLQQAEGAD 498
L ELRK SEFF E Q+ +R AR+ EG RQL V N ++ +MAAC+KLYKDLL+LEN+AI+N+CGFSKILKKHDK TGF TR+ FM N V+ + +Y + +++ E LF I + + T++ L+ +E++ I+++L + +A R +++ D
Sbjct: 80 LHAELRKSSEFFRAAEQQMVIRIARIKEGARQLRETFTVTHENLDQMIMAACLKLYKDLLMLENYAIINFCGFSKILKKHDKNTGFVTRDRFMNNTVSRHEHLCKYEVLKRIIKETEDLFVEISKI----SHTNTKLSLQTDERISIESILNLKFQAIRFKKSVCGD 242
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A7S2LY79_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY79_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.870e-32 Identity = 67/170 (39.41%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 1 VLRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGA-DIGE 507
+L EL+K FF + + ++R+ARV EG + N ++ + + +LYKDLLLLE +AIM YC FSKILKKHDK+TG TR +FMKNVVN A F YPK+++M++ +E++++ + ++G +E+LFI+ + +N + ++ EGA D+GE
Sbjct: 126 LLNSELKKAIHFFDKAQLEFDIREARVREGTEIMKKANSLMVNEKWSLMAKSLYRLYKDLLLLETYAIMTYCSFSKILKKHDKVTGHNTRIAFMKNVVNKANFTHYPKLMQMITRIESMYEEVSQSLIDEGKSGL---YEDERLFINMIHRLNEQVLDTKEEEGAPDVGE 292
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Match: A0A7S0GC00_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GC00_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.310e-32 Identity = 68/166 (40.96%), Postives = 100/166 (60.24%), Query Frame = 1
Query: 1 VLRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACV-KLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGA 495
+L EL+K FF+ E + +R+ RV E + PN ++ N ++A V +LYKDLLLLE FAIM+YC +SKILKKHDK+TG+ TR +FM NVVN A F YP +++M+S E L+ + L + + G +E+LF++ + +N +A EGA
Sbjct: 72 LLHGELKKAIRFFSKAEEEFAIREERVRESMIIMKKPNSIMLINDRWSVLAKSVYRLYKDLLLLETFAIMSYCAYSKILKKHDKVTGYETRVAFMSNVVNKANFTNYPNLVQMISRTETLYDEVSHLLESEGKQGL---YEDERLFLNMIHRLNEQALDTAGEEGA 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15915.4345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15915.4345.1 >prot_Ecto-sp13_S_contig15915.4345.1 ID=prot_Ecto-sp13_S_contig15915.4345.1|Name=mRNA_Ecto-sp13_S_contig15915.4345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp VLRQELRKCSEFFTGVEGQLEVRQARVNEGWRQLLLPNVVVEGNPNKRLMback to top mRNA from alignment at Ecto-sp13_S_contig15915:236..3484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15915.4345.1 ID=mRNA_Ecto-sp13_S_contig15915.4345.1|Name=mRNA_Ecto-sp13_S_contig15915.4345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3249bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15915:236..3484+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15915:236..3484+ >mRNA_Ecto-sp13_S_contig15915.4345.1 ID=mRNA_Ecto-sp13_S_contig15915.4345.1|Name=mRNA_Ecto-sp13_S_contig15915.4345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15915:236..3484+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |