mRNA_Ecto-sp13_S_contig15913.4344.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: D8LNG2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG2_ECTSI) HSP 1 Score: 345 bits (886), Expect = 6.110e-112 Identity = 169/192 (88.02%), Postives = 170/192 (88.54%), Query Frame = 1
Query: 1 QGLTANDVEHRWRDGSLRLKTKHYLGMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIG 576
QGLTANDVEHRWRDGSLRLK KHYLGMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAE+FTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYG EHTLR DHAVTITHDVRSQKEDAPNRYDVDTSAE SLL ELKIG
Sbjct: 421 QGLTANDVEHRWRDGSLRLKAKHYLGMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAEVFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGREHTLR------------------DHAVTITHDVRSQKEDAPNRYDVDTSAERSLLKELKIG 594
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A7S3HK59_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK59_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.140e-62 Identity = 109/220 (49.55%), Postives = 135/220 (61.36%), Query Frame = 1
Query: 49 LRLKTKHYLGMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHVKLSRWLTANGLPPPFLPMVCGYSPLASNILDVLPLGSAGEGP 708
L LK H+ +E APS VVS LM AY D DY YQ+NDDT+I +P WA +AL NP N GVTGP+D+NN +I TH+FVHRTHI++FG FP FKNWWSDDWIS VYG EHT R D VTI H+V +QK + RY+VD SA++ L EL+ GHV++ WL N LP LP++CGY PL + + L +A E P
Sbjct: 34 LSLKLMHFDHLEGAPSQVVSQLMLSAYMDNFDYFYQVNDDTIITSPNWAPKLVAALASNPSIPNFGVTGPSDSNNEKIFTHSFVHRTHIEVFGHLFPPFFKNWWSDDWISTVYGVEHTFR----------------CED--VTIKHNVNAQKTSSLTRYNVDQSAQVQLDKELRKGHVQVDEWLKKNKLPRLSLPVICGYIPLVTYLAKGLQARTAEEIP 235
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A812U7Y0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U7Y0_SYMMI) HSP 1 Score: 199 bits (505), Expect = 2.000e-59 Identity = 106/222 (47.75%), Postives = 130/222 (58.56%), Query Frame = 1
Query: 1 QGLTANDVEHRWRDGSLRLKTKHYLGMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHVKLSRWLTANGLPPPFLPMVCGYSPLASN 666
Q + N++E ++ L LK + ++ APS VVS LM Y D DY YQ+NDDT I TP WA +F AL+DNPL NVGVTGP+DT+NR+I TH+FVHRTH +IFG FP +FKNWWSDDWIS VYG HT R +V I H V +QK RY VD A+L L EL G V + +WL P LP++CGY PL N
Sbjct: 21 QLIEDNEIEEILQN-QLILKLSDFDHLQGAPSQVVSQLMLKGYSDNYDYFYQVNDDTQIVTPNWAPIFVKALQDNPLAPNVGVTGPSDTHNRQIFTHSFVHRTHFEIFGYLFPPAFKNWWSDDWISLVYGQSHTFRLGD-----------------SVQIQHMVGAQKTSGETRYSVDEGAKLILERELMKGFVTIDKWLAKQSYPRLPLPVLCGYIPLVRN 224
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A7S0SZW8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZW8_9STRA) HSP 1 Score: 199 bits (506), Expect = 6.030e-56 Identity = 106/227 (46.70%), Postives = 132/227 (58.15%), Query Frame = 1
Query: 1 QGLTANDVEHRWRDGSLRLKTKHYLGMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHVKLSRWLTANGLPPPFLPMVCGYSPLASNILDVL 681
Q L N++++ D L +K + ++ AP+ VVS L+ AY D DY YQ+NDDT+I TP W L NP N GVTGP DTNN +ILTH+FVHRTHI++FG FP FKNWWSDDWI+ VYGSEHT V I H+V SQK+ RYDVD SA+L L EL GHV++ WL N LP LP +CGY PL ++ +L
Sbjct: 346 QMLDENEIKNVL-DKQLSIKLLDFDHLQGAPTQVVSQLVLTAYVDNFDYFYQVNDDTMIVTPNWVPKLVEKLASNPSIPNFGVTGPTDTNNEKILTHSFVHRTHIEVFGHLFPPYFKNWWSDDWITTVYGSEHTFLCPD------------------VQIKHNVESQKQHGFTRYDVDQSAQLKLEEELMRGHVQIDEWLKKNSLPRLPLPNICGYIPLTRHLSKIL 553
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A6V1PYQ3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PYQ3_HETAK) HSP 1 Score: 185 bits (469), Expect = 2.100e-51 Identity = 98/195 (50.26%), Postives = 118/195 (60.51%), Query Frame = 1
Query: 88 APSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHVKLSRWLTANGLPPPFLPMVCGYSPLASNIL 672
APS VV+ L AYD G DY+YQINDDT I T W F AL NP+ N GVTGP D+ N +I THAFVHRTHI+ G FFP +FKNWWSDDWIS VYG +HT R A V ITH+V +QK NRYD+D SA+ L E++ G V L+R+L G P LP VCG+SP +++
Sbjct: 216 APSQVVNRLAGLAYDAGFDYIYQINDDTEIETKQWHLKFMKALASNPVFPNFGVTGPTDSLNPKIFTHAFVHRTHIEAIGSFFPSTFKNWWSDDWISTVYGEKHTFRHAD------------------VQITHNVEAQKTSGWNRYDIDYSAQYFLEKEIRQGFVTLNRFLRGRGAPGLPLPDVCGFSPAVGDLV 392
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A7S2MG38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG38_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.270e-50 Identity = 89/165 (53.94%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 88 APSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHV 582
+PS VV L AY DG DY++Q+NDDT+I + WA+ F AL N + N+GVTGP DTNN RILTHAFVHRTH+D+FG FFP +FKNWWSDDWIS VYGS HT R V +TH+V+SQK A NRY+VD+SA+ +L EL +G V
Sbjct: 119 SPSQVVVGLANAAYKDGIDYMFQVNDDTVIVSHDWAKSFIRALESNTIHPNLGVTGPVDTNNDRILTHAFVHRTHLDVFGHFFPPAFKNWWSDDWISTVYGSLHTFRMPD------------------VLVTHNVQSQKTGAFNRYEVDSSAQYNLRRELALGFV 265
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A7S2SID6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SID6_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.740e-41 Identity = 81/192 (42.19%), Postives = 112/192 (58.33%), Query Frame = 1
Query: 88 APSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHVKLSRWL--TANGLPPPFLPMVCGYSPL 657
APS+ VS LM AY DG ++L+Q+NDD + T W S L NP+ +G TGP D +N+RI TH F HRTH+DI RFFP +FKN++SDDWI++VYG+ T + T V +TH ++QK+ A RY D +A SL TE+ G +++ WL T +G P + VCGY+P+
Sbjct: 2 APSWAVSNLMDQAYRDGAEWLFQLNDDAKLETQRWERALASVLASNPIHPFLGATGPVDASNKRIFTHVFTHRTHMDIHKRFFPKAFKNYFSDDWITSVYGAASTFKLPT------------------VRMTHQTKAQKKGAIERYHPDHNARRSLGTEVHSGALRIVHWLNSTLDGGKWP-VHAVCGYTPI 174
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A7S2CTF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTF8_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.460e-41 Identity = 85/197 (43.15%), Postives = 112/197 (56.85%), Query Frame = 1
Query: 76 GMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHVKLSRWLTANGLPPPFLPM--VCGYSPLA 660
G APS+ V+ALM+ AYDDG D+L+Q+NDD + T GW T AL N + R +GVTGP D N RI TH FVHRTH++I G FFP +F+N++SDDWIS VYG+ T R V + H+ + QK RY D SA +L +++ G ++ RWL G P P+ VCG+ PLA
Sbjct: 162 GTSGAPSWAVAALMKRAYDDGADWLFQLNDDARLLTLGWELRLTGALASNQVTRLLGVTGPTDLTNPRIFTHVFVHRTHLEIHGSFFPPAFRNYYSDDWISAVYGTSSTFRLPD------------------VKMKHETKKQKTGKIERYKPDMSARKALGKQVEDGTKRVLRWLRVRGQDPLRFPLDSVCGFVPLA 340
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A7S2XZB2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB2_9STRA) HSP 1 Score: 141 bits (356), Expect = 9.750e-38 Identity = 74/163 (45.40%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 169 TLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIF-GRFFPLSFKNWWSDDWISNVYGSEHTLRRATFAEGFWTTLLTLSASDHAVTITHDVRSQKEDAPNRYDVDTSAELSLLTELKIGHVKLSRWLTANGLPPPFLPMVCGYSP 654
T I T WA+ L NP+ N GVTGP DT N +I TH+FVHRTH+++F G +FP FKNWWSDDWIS VYG HT R+ V +TH+V++QK + RY++D +A+ L EL+ G V +SR+L GLP LP +C YSP
Sbjct: 1 TEIVTKYWADRLIQVLASNPILPNFGVTGPTDTLNPKIFTHSFVHRTHLEVFQGAYFPEGFKNWWSDDWISTVYGRRHTFRQQD------------------VKVTHNVKAQKTGSWERYEIDYTAQWILEKELRQGFVTVSRYLRQKGLPGLPLPSICSYSP 145
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Match: A0A7S0L5Z5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5Z5_9EUKA) HSP 1 Score: 124 bits (310), Expect = 1.720e-31 Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 100 VVSALMQDAYDDGCDYLYQINDDTLINTPGWAELFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGSEHTLRR 411
V S+L+Q A GCDY YQ+NDD + T GWAE T LR NP N+G+ GP DTNN R++T +FVH TH IFG ++P SF+NW+SDDW + VYG +T R
Sbjct: 1 VWSSLLQRACSGGCDYFYQLNDDIKLVTHGWAEELTETLRANPYLPNLGIAGPLDTNNARLMTQSFVHCTHHAIFGHYYPPSFRNWYSDDWATQVYGKRNTFWR 104 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15913.4344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15913.4344.1 >prot_Ecto-sp13_S_contig15913.4344.1 ID=prot_Ecto-sp13_S_contig15913.4344.1|Name=mRNA_Ecto-sp13_S_contig15913.4344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp QGLTANDVEHRWRDGSLRLKTKHYLGMEHAPSYVVSALMQDAYDDGCDYLback to top mRNA from alignment at Ecto-sp13_S_contig15913:1456..4038- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15913.4344.1 ID=mRNA_Ecto-sp13_S_contig15913.4344.1|Name=mRNA_Ecto-sp13_S_contig15913.4344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2583bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15913:1456..4038- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15913:1456..4038- >mRNA_Ecto-sp13_S_contig15913.4344.1 ID=mRNA_Ecto-sp13_S_contig15913.4344.1|Name=mRNA_Ecto-sp13_S_contig15913.4344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15913:1456..4038- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |