prot_Ecto-sp13_S_contig15912.4343.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15912.4343.1
Unique Nameprot_Ecto-sp13_S_contig15912.4343.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: D8LHP5_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP5_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 3.900e-100
Identity = 157/174 (90.23%), Postives = 164/174 (94.25%), Query Frame = 0
Query:    3 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASPXXXXXXALPVNVNAFRSSKLNAVNLPQGGGNFAPSEAGANDSCGNGDGGDGKI 176
            KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWV+FLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFAT PA TQA+P XXXXXALPVNVNA+ SS +NAVNLPQGGG   PSEAGA+ SCG+GDGGD +I
Sbjct:  252 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVAFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATCPAGTQATPPXXXXXALPVNVNAYSSSMVNAVNLPQGGGKLTPSEAGADGSCGDGDGGDERI 425          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A6H5JWQ5_9PHAE (PDEase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ5_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 9.760e-79
Identity = 124/142 (87.32%), Postives = 133/142 (93.66%), Query Frame = 0
Query:   35 QGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASPXXXXXXALPVNVNAFRSSKLNAVNLPQGGGNFAPSEAGANDSCGNGDGGDGKI 176
            QGDEEK LGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRN+AMW+AREKAG NSFDFATWPAATQA+P  XXXXALPV+VNA  SS +NAVNLPQGGGNFAP+EAGA+ SCG+GDGGD +I
Sbjct:   17 QGDEEKLLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNQAMWIAREKAGGNSFDFATWPAATQATPSPXXXXALPVDVNAHSSSMVNAVNLPQGGGNFAPNEAGADGSCGDGDGGDERI 158          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A836CJS2_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.190e-39
Identity = 76/121 (62.81%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    3 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFD-FATWPAATQAS 122
            K+C+KSADISHP R   LHL+WT+ VIEEFFLQGDEEK  GLE SPL DR  T IA SQK FI+FLV PLF+SWVSFL+ P A  C  NL+ NEAMWVA+EK GD++ +     P +T++S
Sbjct:  691 KICMKSADISHPTRPMFLHLQWTKAVIEEFFLQGDEEKRRGLEISPLMDRDTTAIADSQKGFINFLVKPLFKSWVSFLNTPEAQTCLTNLEVNEAMWVAKEKRGDDTLEALVPDPPSTRSS 811          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2CJ15_9CILI (Phosphodiesterase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CJ15_9CILI)

HSP 1 Score: 100 bits (249), Expect = 2.140e-21
Identity = 50/102 (49.02%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    4 VCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKA 105
            + +K ADI H A+  +LH RWT  V+EEFF QGD EKSLGL  S  CDR+NTDI  SQ  F+  +  PL+E W SFL     DLC   L+ N   W    K+
Sbjct:  614 MALKCADIGHSAKSPELHQRWTSMVMEEFFNQGDLEKSLGLPVSMYCDRNNTDIPKSQAGFLRNICIPLYEIWCSFLKSQQVDLCLGQLRENYQYWDQNMKS 715          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2CK46_9CILI (Phosphodiesterase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CK46_9CILI)

HSP 1 Score: 98.2 bits (243), Expect = 1.310e-20
Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 LCKVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADL-CTKNLKRNEAMWVAREK 104
            L K+ +K+ADI H A+ T+LH RW R V+EEF++QGD EKSLG+  S  CDR  TDI+ SQ  FI  +V PLF +  + L     +  C   LK NE  WV R K
Sbjct:  485 LFKLLMKAADIGHAAKSTELHERWCRLVVEEFYIQGDMEKSLGISVSMYCDRETTDISKSQAGFIRNIVYPLFSTINAILVSEKIETSCVSQLKTNELYWVMRRK 589          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2CNX6_9CILI (PDEase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CNX6_9CILI)

HSP 1 Score: 96.3 bits (238), Expect = 6.180e-20
Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    1 LCKVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAAD-LCTKNLKRNEAMWVAREKA 105
            L ++ IK+ADI H A+  +LH +W R V+EEF+ QGD EK LGL  S  CDR  TDI+ SQ  FI  +V PLF +    LD    +  C + LK NE+ WV R K+
Sbjct:  500 LLRLIIKAADIGHAAKSIELHEKWCRRVVEEFYTQGDIEKKLGLPVSMYCDRETTDISKSQAGFIKNIVLPLFNAVNFVLDSEFIESFCVEQLKVNESFWVQRRKS 605          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A0G4EIH8_VITBC (Phosphodiesterase n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EIH8_VITBC)

HSP 1 Score: 95.9 bits (237), Expect = 9.390e-20
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    6 IKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADL-CTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASP 123
            +++ADI+H A+   LH +WT  VIEEF+ QGD+EKSLGL  SPLCDR+N D+  SQ  FI ++V P+++    F         C +NL RN   W+  ++A D       WP     +P
Sbjct:  969 LRAADIAHAAKPLALHKQWTARVIEEFYNQGDKEKSLGLPVSPLCDRNNLDLRESQVGFIEYIVKPVYDLMNEFYCSEVVQHDCVENLNRNCEFWMEFDEAKDE------WPPKIDPAP 1081          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2AMD1_9CILI (PDEase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AMD1_9CILI)

HSP 1 Score: 94.7 bits (234), Expect = 2.100e-19
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    3 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCP-AADLCTKNLKRNEAMW 99
            KV IK+ADI H A+  DLH +W   VIEEFFLQGD+EK LGL  S  CDR  T+I  SQ  FI  LV PLF    + L+     D+C + L++N   W
Sbjct:  484 KVVIKAADIGHTAKSIDLHKKWCEQVIEEFFLQGDQEKKLGLPISMYCDRETTNIGKSQSGFIKNLVLPLFIGLNNVLESKFIEDMCIRQLEQNHQYW 581          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A0L0SCK3_ALLM3 (Phosphodiesterase n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SCK3_ALLM3)

HSP 1 Score: 93.2 bits (230), Expect = 7.700e-19
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    4 VCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKA 105
            V IK ADI++P++   L  +WT  ++EEFFLQGDEE+  G+E S L DR+NTDI   Q  FI F+V PLF++W  F+      L   N++ N+A W A+ +A
Sbjct:  661 VAIKCADINNPSKPLHLCTQWTALIMEEFFLQGDEERRRGMEVSVLMDRYNTDIPKCQVGFIDFVVAPLFDAWALFMQEDIKPL-KNNIQNNKAYWKAKLEA 761          
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A0L0T1W0_ALLM3 (Phosphodiesterase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T1W0_ALLM3)

HSP 1 Score: 92.0 bits (227), Expect = 2.010e-18
Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 0
Query:    3 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRH---NTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASPXXXXXXALPVNVNAFRSSKLNA 145
            +V +K +D+S+P R     L WT  ++EEF+LQGD+E+SLGL  S   DRH   + ++A  Q +FI  +V PL+++W +FL  P     T N+  N   W    ++ DN     T  A   A+       A P N    R   L+A
Sbjct:  559 EVAMKCSDLSNPTRPRPTSLEWTHRIMEEFYLQGDQERSLGLPISKFMDRHLSMDENVAKCQASFIDVIVGPLYQAWSTFLQSPITATMTGNIHANRTYWTHSARSRDNLALSKTTDALATATSLPSAVPAAP-NSTVTRMGSLHA 703          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHP5_ECTSI3.900e-10090.23Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JWQ5_9PHAE9.760e-7987.32PDEase domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A836CJS2_9STRA1.190e-3962.81Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A1R2CJ15_9CILI2.140e-2149.02Phosphodiesterase n=1 Tax=Stentor coeruleus TaxID=... [more]
A0A1R2CK46_9CILI1.310e-2048.57Phosphodiesterase n=1 Tax=Stentor coeruleus TaxID=... [more]
A0A1R2CNX6_9CILI6.180e-2047.17PDEase domain-containing protein n=1 Tax=Stentor c... [more]
A0A0G4EIH8_VITBC9.390e-2041.18Phosphodiesterase n=5 Tax=Vitrella brassicaformis ... [more]
A0A1R2AMD1_9CILI2.100e-1950.00PDEase domain-containing protein n=1 Tax=Stentor c... [more]
A0A0L0SCK3_ALLM37.700e-1946.08Phosphodiesterase n=2 Tax=Allomyces macrogynus (st... [more]
A0A0L0T1W0_ALLM32.010e-1834.93Phosphodiesterase n=1 Tax=Allomyces macrogynus (st... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPFAMPF00233PDEase_Icoord: 1..83
e-value: 2.1E-23
score: 83.3
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPROSITEPS51845PDEASE_I_2coord: 1..102
score: 35.207
IPR0369713'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamilyGENE3D1.10.1300.10coord: 1..102
e-value: 1.6E-32
score: 114.9
NoneNo IPR availablePANTHERPTHR11347CYCLIC NUCLEOTIDE PHOSPHODIESTERASEcoord: 2..105
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 1..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15912contigEcto-sp13_S_contig15912:934..2684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15912.4343.1mRNA_Ecto-sp13_S_contig15912.4343.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15912 934..2686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15912.4343.1 ID=prot_Ecto-sp13_S_contig15912.4343.1|Name=mRNA_Ecto-sp13_S_contig15912.4343.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
LCKVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLC
DRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWV
AREKAGDNSFDFATWPAATQASPPPPPPPALPVNVNAFRSSKLNAVNLPQ
GGGNFAPSEAGANDSCGNGDGGDGKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002073PDEase_catalytic_dom
IPR036971PDEase_catalytic_dom_sf