prot_Ecto-sp13_S_contig10458.434.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10458.434.1
Unique Nameprot_Ecto-sp13_S_contig10458.434.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length204
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10458.434.1 vs. uniprot
Match: D8LMW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW3_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.140e-90
Identity = 197/204 (96.57%), Postives = 200/204 (98.04%), Query Frame = 0 
Query:    1 MAAFQREHAYVAQALDPCQIPEHKLAENQLPTKENRDLYGAATSGNLSELKVALAAGAHSNWYNKSEDGATALHRAASGGHVGCVEQLLKNGSVIDERLLTNSNSAXXXXXXXXXXXXXXVLLAASAAVNAGNSYGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLHFLAYSTAMPPADKKALTLKLVQAGVNLDSK 204
            MAAFQREHAYVAQALDP QIPEHKLAENQLPTK+NRDLYGAATSGNLSELKVALAAGA+SNWYNKSEDGATALHRAASGGHVGCVEQLLKNGSVIDERLLTNSNSAXXXXXXXXXXXXXX  LA+SAAVNAGNSYGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLHFLAYSTAMPPADKKAL LKLVQAGVNLDSK
Sbjct:    1 MAAFQREHAYVAQALDPSQIPEHKLAENQLPTKKNRDLYGAATSGNLSELKVALAAGANSNWYNKSEDGATALHRAASGGHVGCVEQLLKNGSVIDERLLTNSNSAXXXXXXXXXXXXXXXXLASSAAVNAGNSYGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLHFLAYSTAMPPADKKALALKLVQAGVNLDSK 204
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BLAST of mRNA_Ecto-sp13_S_contig10458.434.1 vs. uniprot
Match: A0A835ZFX4_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX4_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.090e-22
Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 0 
Query:   20 IPEHKLAENQLPTKENRDLYGAATSGNLSELKVALAAGAHSNWYNKSEDGATALHRAASGGHVGCVEQLLKNGSVIDERLLTNSNSAXXXXXXXXXXXXXXVLLAASAAVNAGNSYGN 137
            +P HKLA NQLPT  N  LY AA +GNL  ++  L  GA  NW+   E+GATA+H+AA GGH   ++ L++ G V+D+ LLTN N+ XXXXXXXXXXXXXX   AA A V A N++GN
Sbjct:   19 LPPHKLAANQLPTPANVTLYEAAKAGNLRRVRRCLDNGASPNWFQNPEEGATAMHKAAEGGHTDILQLLIERGGVLDDALLTNRNTPXXXXXXXXXXXXXXXXXAAGAPVGAANAFGN 136
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BLAST of mRNA_Ecto-sp13_S_contig10458.434.1 vs. uniprot
Match: A0A0M0JJV3_9EUKA (RING-type E3 ubiquitin transferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JJV3_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 3.930e-5
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:   36 RDLYGAATSGNLSELKVALAAGAHSNWYNKSEDGATALHRAASGGHVGCVEQLL 89
            RDL+ AA +GN  ELK  +  G    W N ++ G TALH AA GGH+ CVE LL
Sbjct:  371 RDLFEAAKAGNNDELKRLIDLGGDVLWKNPNDSGMTALHYAAFGGHLACVETLL 424
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10458.434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMW3_ECTSI1.140e-9096.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFX4_9STRA7.090e-2255.08Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A0M0JJV3_9EUKA3.930e-551.85RING-type E3 ubiquitin transferase n=1 Tax=Chrysoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 69..84
score: 42.68
coord: 151..165
score: 36.34
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 102..131
e-value: 2.6E-4
score: 30.3
coord: 135..167
e-value: 0.11
score: 21.6
coord: 168..203
e-value: 1200.0
score: 4.3
coord: 68..97
e-value: 2.3E-4
score: 30.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 102..134
score: 11.861
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 135..167
score: 12.155
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 68..100
score: 10.499
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 84..162
e-value: 4.5E-13
score: 49.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 33..204
score: 38.515
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 12..202
e-value: 3.7E-37
score: 130.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 24..179
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 101..179
coord: 31..139
coord: 32..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10458contigEcto-sp13_S_contig10458:46..2269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10458.434.1mRNA_Ecto-sp13_S_contig10458.434.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10458 46..2269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10458.434.1 ID=prot_Ecto-sp13_S_contig10458.434.1|Name=mRNA_Ecto-sp13_S_contig10458.434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
MAAFQREHAYVAQALDPCQIPEHKLAENQLPTKENRDLYGAATSGNLSEL
KVALAAGAHSNWYNKSEDGATALHRAASGGHVGCVEQLLKNGSVIDERLL
TNSNSALHLACGNGHVETVKVLLAASAAVNAGNSYGNAPIHAALMGGHRA
VVELLLESGAEAQWTNNKGSSLLHFLAYSTAMPPADKKALTLKLVQAGVN
LDSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf