mRNA_Ecto-sp13_S_contig1591.4339.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: D7FSJ3_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ3_ECTSI) HSP 1 Score: 228 bits (582), Expect = 8.380e-70 Identity = 123/151 (81.46%), Postives = 126/151 (83.44%), Query Frame = 1
Query: 1 GVYVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAWAEYASKVAEKADQPDVVVFGFFVT---IMQFILTNLFIMVIVETFETLNAMERQDLEDAIPCFQETWTTFDPKGSGKLPPKHLFTFLLELQKPLGAAGNHALA 444
GVY SDVEIEKTT+NLYQDFSSV HAMELLFIVATGEAWAEYASKVAE+ADQPD VVFGFFVT IMQFILTNLFIMVIVETFETLNAMERQDLEDAIPCFQETWTTFDPKGSGKLPPKHLFT L L L + NHA A
Sbjct: 91 GVYXXXXXXXXXXSDVEIEKTTMNLYQDFSSVSHAMELLFIVATGEAWAEYASKVAERADQPDAVVFGFFVTFVVIMQFILTNLFIMVIVETFETLNAMERQDLEDAIPCFQETWTTFDPKGSGKLPPKHLFTILAGLGAALLSDENHAHA 241
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: A0A6H5K0T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T1_9PHAE) HSP 1 Score: 187 bits (476), Expect = 9.090e-52 Identity = 115/183 (62.84%), Postives = 119/183 (65.03%), Query Frame = 1
Query: 4 VYVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAWAEYASKVAEKADQPDVVVFGFFVT---IMQFILTNLFIMVIVETFETLNAMERQDLEDAIPCFQETWTTFDPKGSGKLPPKHLFTFLLELQKPLGAAGNHALAGRYAAMLKSAPEFDYSFAKILAGLGAALLSDEN 543
V+V IGV +DFSSVWHAMELLFIVATGEAWAEYASKVAEKADQPD VVFGFFVT IMQFILTNLFIMVIVETFE DLEDAIPCFQETWT DPKGSGKLPPKHLFT+ PL P F +ILAGLGAALLSDEN
Sbjct: 1488 VFVLLGIGVXXXXXXXXXXXXXXEIEDFSSVWHAMELLFIVATGEAWAEYASKVAEKADQPDAVVFGFFVTFVVIMQFILTNLFIMVIVETFE--------DLEDAIPCFQETWTKIDPKGSGKLPPKHLFTY-----HPLNL---------------HVPAF-----QILAGLGAALLSDEN 1637
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: A0A7S2V309_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V309_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 7.000e-16 Identity = 50/144 (34.72%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 7 YVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLF-IVATGEAWAEYASKVAEKADQPDVVV---FGFFVTIMQFILTNLFIMVIVETFETLNAMERQDLEDAIPCFQETWTTFDPKGSGKLPPKHLFTFLLELQKPLGAA 426
+ +A +G+A+F DV+ + + F S+W A+++L ++ G A Y ++ + PD+ V FG F+ I+ F++ N+F+MVIVETFE + R+ E A+ +QE WT DPK SG + L L+ L +PLG +
Sbjct: 34 FFYAALGLAIFPDVDYTEWELAENVGFGSLWEAIQMLLQLMNAGVIDAIYLTQ--RETATPDIFVGFFFGSFLLIVNFLMINMFVMVIVETFEMFSHDARRATETALRQYQEAWTCQDPKASGVISHDSLVGLLMALPEPLGVS 175
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: A0A7S3Y5V7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5V7_HETAK) HSP 1 Score: 80.1 bits (196), Expect = 3.000e-14 Identity = 50/178 (28.09%), Postives = 93/178 (52.25%), Query Frame = 1
Query: 1 GVYVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAWAEYASKVAEKADQPDV------VVFGFFVTIMQFILTNLFIMVIVETFETLNAME-RQDLEDAIPCFQETWTTFDPKGSGKLPPKHLFTFLLELQKPLGAAGN--HALAGRYAAMLKSAPEFDYSFAKIL 507
G++++A +G +F+ V+ + + +F ++ A++L+ + +GE ++ Y E+ + V + F F M F+L N+F+M I++TFE L +E+ IP +QE W+ +DP +G LPP L LL+L + +G + + L++ P +DYSF + L
Sbjct: 356 GIFIWATVGHLVFAGVDYGSS----FANFDNLLMALQLMVVCTSGE-YSGYLETTLEQYNVHGVPHWLVALFFSSFYLAMSFLLVNMFVMFIIQTFELLKMESANMSIEELIPTYQEVWSKYDPNATGLLPPHRLTDLLLDLPEEIGVGPHDPYLYLVHLVDRLEAQPSYDYSFHRTL 528
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: A0A7S2V2U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2U1_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.210e-12 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 1
Query: 226 FILTNLFIMVIVETFETLNAMERQDLEDAIPCFQETWTTFDPKGSGKLPPKHLFTFLLELQKPLGAAGNHALAGRYAAMLKSAPE--FDYSFAKILAGLGA 522
F+L NLF+M+IV+TF+ L A R E IP FQE W+ DP+G G++ P L+ + PLG GN + + + + + F+Y F ++L + A
Sbjct: 2 FLLINLFVMIIVDTFQVLRAPTRMQYEKNIPVFQEAWSRLDPQGKGRIAPPQLWELYRSVPPPLGIQGNQSFLAAHWRITRMEAQIGFEYKFNQVLVSMFA 102
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: G0QQG3_ICHMG (Uncharacterized protein (Fragment) n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QQG3_ICHMG) HSP 1 Score: 68.6 bits (166), Expect = 3.440e-10 Identity = 45/143 (31.47%), Postives = 77/143 (53.85%), Query Frame = 1
Query: 7 YVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAWAEYASKVAEKADQPDVVVFGFFVTIMQFILTNLFIMVIVETFETLNAMERQDLEDAIPCFQET----WTTFDPKGSG-KLPPKHLFTFLLELQKPLG 420
++F+ + V LF D+ K IN Q+FS+ ++ LLF+ +TGE W Y + +++ F FF+ I+Q+++ NLFI++IV+ FE N + Q+ + F+E W + G K+ + L F + LQ+P G
Sbjct: 1817 FIFSILAVFLFQDITQGKW-INKEQNFSNFHQSINLLFVCSTGENWMYYMFDTIKYGSSINIIFFVFFIIIVQYVMMNLFILIIVDQFEQ-NYINEQNPLNEFQAFEENFKKVWVDKTKETHGIKINERSLTDFYMCLQEPFG 1957
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: A0A7S2V5I9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5I9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.540e-9 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 184 PDVVVFGFFVTI---MQFILTNLFIMVIVETFETLNAMERQDLEDAIPCFQETWTTFDPKGSGKLPP--KH-LFTFLLELQKPLGAAGNHALAGR--YAAMLKSAPEFDYSFAKILAGL 516
P V+VF +F + M FI+ N+FIM+IV+T++ L ER ++ IP FQE W+ FDPK G + +H L L L PLG N + ++++ +DYSF K L L
Sbjct: 3 PPVLVFLYFASFLIAMNFIMVNMFIMIIVDTYDLLTEPERLKVDKLIPIFQEAWSKFDPKAKGTIVSHGRHGLMGLLCALPHPLGLEKNTPFIKFRIWVDIIETQEGYDYSFNKTLISL 121
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: A0A0V0R2X0_PSEPJ (Uncharacterized protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R2X0_PSEPJ) HSP 1 Score: 66.2 bits (160), Expect = 2.200e-9 Identity = 52/159 (32.70%), Postives = 78/159 (49.06%), Query Frame = 1
Query: 7 YVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAWAEYA-----SKVAEKADQPDVVV----FGFFVTIMQFILTNLFIMVIVETFETLNAMERQDLE---DAIPCFQETWTTFDPKGSG-KLPPKHLFTFLLELQKPLGAAGNHALA 444
++F+ +GV LF DV E IN Y +F + +AM LF +TGE WA +K K + + F+ + QFI+ NLFIM+IV+ FE N E + + I F+ W+ + G K+ K + L EL +PLG G+ +A
Sbjct: 3025 FIFSVLGVFLFKDVT-EGQVINEYVNFKNFGYAMLTLFRCSTGEDWALIMFDCSRTKNCVKGKTCGTIFSIPYYLVFILVTQFIMLNLFIMIIVQFFEEYNLSEENSMNTFNEKIGVFRHYWSKYSKWSKGEKIKQKQCASMLSELPEPLGYGGSVEVA 3182
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: J9FXK4_9SPIT (Voltage-gated Ion Channel (VIC) Superfamily n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9FXK4_9SPIT) HSP 1 Score: 63.9 bits (154), Expect = 1.350e-8 Identity = 49/169 (28.99%), Postives = 83/169 (49.11%), Query Frame = 1
Query: 4 VYVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAW-----------------------AEYASK--VAEKADQPDVVVFGFFVT---IMQFILTNLFIMVIVETFETLNAMERQDLEDA-IPCFQETWTTFDPKGSGKLPPKHLFTFLLELQKPLGA 423
+YVF+ +G+ LFS+V+++ T ++ + +F + + A L ATGEAW +Y + V P + FF++ ++ I NLFI +I+E+FE +N E ++DA + FQ+ W T+D KG+G +P +L+L K A
Sbjct: 1509 IYVFSILGIFLFSEVKLQ-TYLDKHANFQNFYMAFMTLLRCATGEAWNYIMDDCARTFSIRFDCLPDPSYEDYVNNGYVTSGCGDPTTA-YAFFMSFTMLVTMIFLNLFIAIILESFENVNQQEDLKIQDADLDIFQKIWLTYDNKGTGFIPIHKFENLMLDLIKQKSA 1675
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Match: A0C2L5_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0C2L5_PARTE) HSP 1 Score: 62.4 bits (150), Expect = 4.570e-8 Identity = 44/152 (28.95%), Postives = 79/152 (51.97%), Query Frame = 1
Query: 7 YVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAWAEYASKVAEKADQPDVVVFGFFVTIMQFILTNLFIMVIVETFETL-----NAMER-QDLEDAIPCFQETWTTFDPKGSG-KLPPKHLFTFLLELQKPLGAAGNHAL 441
++F+ +GV LF D+ E I+ +F H+ E+LF ++GE W + + + + V F F+ I Q+I+ NLFI++I++ +E N + + Q+ E+ F E+W+ F + G K+ L + E+++PLG N L
Sbjct: 1806 FIFSILGVFLFQDIR-EGQVISESNNFQDFHHSFEILFQCSSGEDWHKIMFDTMKGGQEYNCVFFVLFIIIQQYIMLNLFILIILDQYEVNYFNSDNPLNKFQEFEN---IFVESWSKFAYQDKGMKMHGTSLVNLMFEMEQPLGYELNKRL 1953 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1591.4339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1591.4339.1 >prot_Ecto-sp13_S_contig1591.4339.1 ID=prot_Ecto-sp13_S_contig1591.4339.1|Name=mRNA_Ecto-sp13_S_contig1591.4339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp GVYVFANIGVALFSDVEIEKTTINLYQDFSSVWHAMELLFIVATGEAWAEback to top mRNA from alignment at Ecto-sp13_S_contig1591:1634..4683+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1591.4339.1 ID=mRNA_Ecto-sp13_S_contig1591.4339.1|Name=mRNA_Ecto-sp13_S_contig1591.4339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3050bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1591:1634..4683+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1591:1634..4683+ >mRNA_Ecto-sp13_S_contig1591.4339.1 ID=mRNA_Ecto-sp13_S_contig1591.4339.1|Name=mRNA_Ecto-sp13_S_contig1591.4339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1591:1634..4683+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |