prot_Ecto-sp13_S_contig15906.4335.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15906.4335.1
Unique Nameprot_Ecto-sp13_S_contig15906.4335.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length165
Homology
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: D7G0Y1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y1_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 4.650e-100
Identity = 160/164 (97.56%), Postives = 161/164 (98.17%), Query Frame = 0
Query:    1 MVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGTP 164
            MVFRWESGLLRCQARLGVKKALSMCFS NSDELLA GHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCA A+SNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGTP
Sbjct: 1353 MVFRWESGLLRCQARLGVKKALSMCFSFNSDELLAVGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAVAISNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGTP 1516          
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A6H5KFK9_9PHAE (HELP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK9_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 5.670e-90
Identity = 147/166 (88.55%), Postives = 150/166 (90.36%), Query Frame = 0
Query:    1 MVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAEL--------GMVNEFDLVGRPY 158
            MVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAA+SNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAE+        G +    LV   Y
Sbjct:  467 MVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAISNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAEVISRRWGLSGAIENISLVTTDY 632          
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A7S1TVZ1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVZ1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.710e-17
Identity = 56/154 (36.36%), Postives = 85/154 (55.19%), Query Frame = 0
Query:    2 VFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLD-GGRKVSSEIEGH--EGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFD 152
            +F W   +L      G KK L++ +S +  ++L  G KHF++W L+G  L+  KRGLFGS +K Q + CA  + N      +F++G  +G + K++ GGRKV    EG   +G   AL  Y   + +   L++GG DG +K W A+L    EFD
Sbjct:  337 IFNWAEEVLVASKPSGDKKVLTLAWSTDGTQILQGGEKHFRIWKLNGR-LLTSKRGLFGSSAKKQNVHCAVFLEN------AFVMGVENGDIYKVEEGGRKVGQVAEGAHPKGACGALGIYKNVEANALMLISGGFDGVVKYWSADL----EFD 479          
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A485KS51_9STRA (Aste57867_11158 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KS51_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 9.990e-6
Identity = 43/156 (27.56%), Postives = 74/156 (47.44%), Query Frame = 0
Query:    2 VFRWESGLLRCQARLGVKKAL-SMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSS--FILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLV 154
            +++W+ G+L   ++ GV+ AL  +     S+E ++ G K    WT  G  L   K+ + G     Q    A  +        S    +G   GS+  ++  + +S  I+ H GPV+AL++      S    ++GG DGK+  WDA L  ++ FD+ 
Sbjct: 1092 IYKWKEGVLVASSK-GVRNALMGLIHFPTSNEWISLGDKVITFWTEQGRNL-NAKKAILGKDVTPQMFYAATVLPTATTAKPSAKLAVGTHDGSIYVIEN-KTLSKVIKAHTGPVFALFS----SNSKAEWISGGKDGKVTIWDANLSALHSFDVA 1240          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0Y1_ECTSI4.650e-10097.56N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KFK9_9PHAE5.670e-9088.55HELP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1TVZ1_9STRA1.710e-1736.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A485KS51_9STRA9.990e-627.56Aste57867_11158 protein n=1 Tax=Aphanomyces stella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 9..45
e-value: 360.0
score: 0.8
coord: 99..142
e-value: 0.005
score: 26.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 106..142
score: 10.308
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..153
e-value: 2.1E-25
score: 91.3
NoneNo IPR availablePANTHERPTHR13720:SF33ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 6coord: 2..152
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 2..152
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 129..143
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 106..151
score: 9.626
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15906contigEcto-sp13_S_contig15906:910..2962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15906.4335.1mRNA_Ecto-sp13_S_contig15906.4335.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15906 41..3028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15906.4335.1 ID=prot_Ecto-sp13_S_contig15906.4335.1|Name=mRNA_Ecto-sp13_S_contig15906.4335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp
MVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGG
LMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGR
KVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNE
FDLVGRPYLSGGTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf