mRNA_Ecto-sp13_S_contig15906.4335.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: D7G0Y1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y1_ECTSI) HSP 1 Score: 369 bits (947), Expect = 8.200e-114 Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 1
Query: 1 QVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGTP 558
QVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFS NSDELLA GHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCA A+SNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGTP
Sbjct: 1331 QVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSFNSDELLAVGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAVAISNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGTP 1516
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A6H5KFK9_9PHAE (HELP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK9_9PHAE) HSP 1 Score: 332 bits (852), Expect = 2.180e-105 Identity = 169/188 (89.89%), Postives = 172/188 (91.49%), Query Frame = 1
Query: 1 QVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAEL--------GMVNEFDLVGRPY 540
QVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAA+SNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAE+ G + LV Y
Sbjct: 445 QVCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAISNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAEVISRRWGLSGAIENISLVTTDY 632
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A7S1TVZ1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVZ1_9STRA) HSP 1 Score: 104 bits (260), Expect = 8.380e-22 Identity = 65/176 (36.93%), Postives = 99/176 (56.25%), Query Frame = 1
Query: 4 VCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLD-GGRKVSSEIEGH--EGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFD 522
+ FS+DG LAV+ D H++ +F W +L G KK L++ +S + ++L G KHF++W L+G L+ KRGLFGS +K Q + CA + N +F++G +G + K++ GGRKV EG +G AL Y + + L++GG DG +K W A+L EFD
Sbjct: 315 MAFSADGAYLAVSTCDDLHSLQIFNWAEEVLVASKPSGDKKVLTLAWSTDGTQILQGGEKHFRIWKLNGR-LLTSKRGLFGSSAKKQNVHCAVFLEN------AFVMGVENGDIYKVEEGGRKVGQVAEGAHPKGACGALGIYKNVEANALMLISGGFDGVVKYWSADL----EFD 479
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: K3WHU2_GLOUD (EF-hand domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHU2_GLOUD) HSP 1 Score: 73.9 bits (180), Expect = 2.840e-11 Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 3
Query: 561 KILVGTSCSEIFEISTSEGTDVNGGDCLMRGHFRDQLWGLASHPAKPLYVSSGDEGMLKEWNASTLAL 764
K+L+GT S+I E+ S GT +NGG L GH+ +LWGLA HP++ +V++GD+G L+ W+ T L
Sbjct: 2001 KLLIGTRSSDIIEMDVSSGTLLNGGKPLFSGHYNSELWGLAVHPSRREFVTTGDDGTLRVWDMETKQL 2068
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A5D6XKB7_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKB7_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.840e-11 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 3
Query: 534 AVSIGRDPLKILVGTSCSEIFEISTSEGTDVNGGDCLMRGHFRDQLWGLASHPAKPLYVSSGDEGMLKEWNAST 755
+V + K+LVGT S+I E+ S G +NGG L GHF +LWGLA HP++ + ++GD+G L+ W+ T
Sbjct: 2056 SVDLSASAQKLLVGTKSSDIVEVDVSSGVVLNGGRPLFSGHFTHELWGLAVHPSRREFTTTGDDGTLRVWDMDT 2129
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A6J0XBB0_ODOVR (echinoderm microtubule-associated protein-like 5 isoform X7 n=5 Tax=Cervidae TaxID=9850 RepID=A0A6J0XBB0_ODOVR) HSP 1 Score: 71.2 bits (173), Expect = 2.280e-10 Identity = 55/185 (29.73%), Postives = 87/185 (47.03%), Query Frame = 1
Query: 4 VCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFS-LNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGT 555
V FS+DG+ LA A D GHTV+++ W+ G C R K + + D+L+ AG KH K W +GGGL+ G++G G+ K + CA G G+S + + + ++ H+GPV++++A VTGG DG + WD + + R L+ G+
Sbjct: 778 VDFSADGRRLASAGLDDGHTVVLWDWKRGERLCVTRGSKDKIFVVKMNPYVPDKLMTAGIKHIKFWRRAGGGLI-GRKGYIGTLGKNDTMMCAV-----YGWTEEMAFSGTSTGDVCIWRDIFLVKTVKAHDGPVFSMHALEKG------FVTGGKDGVVTLWDDSFERCLKTYAIKRAALAPGS 950
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A485KS51_9STRA (Aste57867_11158 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KS51_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.170e-10 Identity = 51/176 (28.98%), Postives = 86/176 (48.86%), Query Frame = 1
Query: 10 FSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKAL-SMCFSLNSDELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSS--FILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLV 528
FS+DG +LA D H++ +++W+ G+L ++ GV+ AL + S+E ++ G K WT G L K+ + G Q A + S +G GS+ ++ + +S I+ H GPV+AL++ S ++GG DGK+ WDA L ++ FD+
Sbjct: 1072 FSTDGAILASMGNDDDHSIAIYKWKEGVLVASSK-GVRNALMGLIHFPTSNEWISLGDKVITFWTEQGRNL-NAKKAILGKDVTPQMFYAATVLPTATTAKPSAKLAVGTHDGSIYVIEN-KTLSKVIKAHTGPVFALFS----SNSKAEWISGGKDGKVTIWDANLSALHSFDVA 1240
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A812T9P4_9DINO (EML6 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812T9P4_9DINO) HSP 1 Score: 67.4 bits (163), Expect = 3.950e-9 Identity = 28/68 (41.18%), Postives = 49/68 (72.06%), Query Frame = 3
Query: 561 KILVGTSCSEIFEISTSEGTDVNGGDCLMRGHFRDQLWGLASHPAKPLYVSSGDEGMLKEWNASTLAL 764
K+LVGT+ +E++E++ EGT+++ G CL++GH +D++WG+A HP K + GD+ L+ W+ T +L
Sbjct: 698 KLLVGTAGAEVYELNAMEGTNLHDG-CLLQGHCKDEVWGIAVHPQKGEVATVGDDRTLRIWSLKTHSL 764
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: UPI00140338E2 (echinoderm microtubule-associated protein-like 6 isoform X1 n=6 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140338E2) HSP 1 Score: 66.2 bits (160), Expect = 1.120e-8 Identity = 61/184 (33.15%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 4 VCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLG-VKKALSMCFSLNSD-ELLAAGHKHFKVWTLSGGGLMQGKRGLFG--SGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGD------GKIKTWDAELGMVNEFDL 525
V FS+ G+LL D HT+ V+RW+ G R +R G ++ + F +SD +L+ AG K K WTL+GG L+ K+G+ G G++VQ + A +N S G SG + V H GPV+++Y DG +VTGG + G +K WD E+ F L
Sbjct: 1551 VGFSATGRLLVSVGADPEHTLTVWRWQEGA-RVSSRAGHSERVFAAEFRPDSDSQLVTAGVKSVKFWTLAGGVLLA-KKGVLGPVEGARVQTMLSLAFGAN-----SLTFTGSLSGDVYVWREHVLVRLVARAHTGPVFSMYT-TLKDG---LIVTGGKERPSKEGGAVKLWDQEMKRCRAFQL 1723
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Match: A0A212CTF1_CEREH (EML5 (Fragment) n=2 Tax=Artiodactyla TaxID=91561 RepID=A0A212CTF1_CEREH) HSP 1 Score: 64.3 bits (155), Expect = 4.040e-8 Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 1
Query: 4 VCFSSDGKLLAVACEDKGHTVMVFRWESGLLRCQARLGVKKALSMCFSLNS---DELLAAGHKHFKVWTLSGGGLMQGKRGLFGSGSKVQALTCAAAMSNGEGGGSSFILGGSSGSLLKLDGGRKVSSEIEGHEGPVYALYAYPAPDGSGTCLVTGGGDGKIKTWDAELGMVNEFDLVGRPYLSGGT 555
V FS+DG+ LA A D GHTV+++ W+ G R G K + + +N D+L+ AG KH K W +GGGL+ G++G G+ K + MS G G+S + + + ++ H+GPV++++A VTGG DG + WD + + R L+ G+
Sbjct: 391 VDFSADGRRLASAGLDDGHTVVLWDWKRGE-RLSITRGSKDKIFVV-KMNPYVPDKLMTAGIKHIKFWRRAGGGLI-GRKGYIGTLGKNDTM-----MSAVYGWTEEMAFSGTSTGDVCIWRDIFLVKTVKAHDGPVFSMHALEKG------FVTGGKDGVVALWDDSFERCLKTYAIKRAALAPGS 563 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15906.4335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15906.4335.1 >prot_Ecto-sp13_S_contig15906.4335.1 ID=prot_Ecto-sp13_S_contig15906.4335.1|Name=mRNA_Ecto-sp13_S_contig15906.4335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp MVFRWESGLLRCQARLGVKKALSMCFSLNSDELLAAGHKHFKVWTLSGGGback to top mRNA from alignment at Ecto-sp13_S_contig15906:41..3028- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15906.4335.1 ID=mRNA_Ecto-sp13_S_contig15906.4335.1|Name=mRNA_Ecto-sp13_S_contig15906.4335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2988bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15906:41..3028- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15906:41..3028- >mRNA_Ecto-sp13_S_contig15906.4335.1 ID=mRNA_Ecto-sp13_S_contig15906.4335.1|Name=mRNA_Ecto-sp13_S_contig15906.4335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=495bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15906:41..3028- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |