prot_Ecto-sp13_S_contig1590.4331.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1590.4331.1
Unique Nameprot_Ecto-sp13_S_contig1590.4331.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length644
Homology
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: D7G964_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G964_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 6.400e-139
Identity = 394/613 (64.27%), Postives = 412/613 (67.21%), Query Frame = 0
Query:   18 EQVANAEDDVPAHPPPFCIVPTQTSAAPAAXXXXXXXXXXQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEGSGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLLTLVAGGVRSAAAANTTTTRSVGTQTNTTSSVGGINSS-WTCLPGDADCVSDDTDEATWTWVEIITDILALTTVLRLLWFSAVWFGGTVTTCAMWASTMRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGGEAVGEEAAAPATSSSAEPAPAPGPVLRRARSYFERIVSNLTETAMVVGEAASNVGDAALELVVVVHPTPAAEXXXXXXXXXXXXXXAVGSPVAVSNTSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---------------PYTTANDAAAVSAXXEG--VXXXXXXXXXXXXXAGVGRPPVLLRSLSYFDRVV 612
            +QVANAEDDVPAHPPPFCIVPTQT+A PAAXXXXXXXXXX                 E           ST G   V +LQEGSGG  DVETYV+TT+EFNGNGG FVAPLG GTS VDSAK  EG  AFFATG A  +MEHQQH+HPPDWM+AFERFRPRTSGRKLLGMA A A  GGVVRR +T GLEKLHAH+ DTATASVLIGC SL FG KAV+LLTLVAGGVRSAA      TR+VGTQTNTTSS+ GINS  WTC PGDADC+SDDTDE TWTW E+ITD+LALTTVLR LW SAVW GGT TTC MWA T R+                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          A  PVLRRARSY ERIVSNLTETAMVVGEAASNVGDAALELVVVV P  A    XXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                P TTA DA AV A  EG          XXXXXXAGVGRPPVLLRSLSY DR+V
Sbjct:   95 KQVANAEDDVPAHPPPFCIVPTQTTAEPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------QLSTEG---VEVLQEGSGGSADVETYVQTTHEFNGNGGGFVAPLGGGTS-VDSAKGLEGGEAFFATGGADARMEHQQHQHPPDWMRAFERFRPRTSGRKLLGMAKASAGSGGVVRRFMTKGLEKLHAHVADTATASVLIGCASLRFGSKAVLLLTLVAGGVRSAAXXXXXXTRTVGTQTNTTSSIEGINSGGWTCRPGDADCLSDDTDEKTWTWFEVITDVLALTTVLRFLWISAVWLGGTTTTCVMWARTRRSRSTRASVSPLIPTADAVVVAVAVAATAAPVIAAPPTAAAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------ASVPVLRRARSYVERIVSNLTETAMVVGEAASNVGDAALELVVVVRPAEAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTTAYDAVAVPAAAEGEVAGSSAEPAXXXXXXAGVGRPPVLLRSLSYLDRMV 668          
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5K2H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H8_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.420e-48
Identity = 104/177 (58.76%), Postives = 114/177 (64.41%), Query Frame = 0
Query:   69 GVEALQEGSG--IDIETTMASTN------------------------GLNR--------------VVLLQEGSGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTG 205
            GVE LQEG G   D+ETTM ST+                        GL +              V LLQEG GG  DVET + +T+EF+GNGGAFVAPLG GTSSVDS K  E D AFFATGDA T+MEH QH+HPPDWM+AFERFRPRTSGRKLLGMA A  RGGGVVRRLLT G
Sbjct:   18 GVELLQEGGGGWADVETTMTSTDEFSGNGGAFVAPLGGGTSSVDSTKGLEKDEAFFATGDADTRGVELLQEGGGGWADVETTMTSTDEFSGNGGAFVAPLGGGTSSVDSTKGLEKDEAFFATGDADTRMEHHQHQHPPDWMRAFERFRPRTSGRKLLGMAKASTRGGGVVRRLLTKG 194          
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5KZU3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU3_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 8.440e-33
Identity = 117/282 (41.49%), Postives = 146/282 (51.77%), Query Frame = 0
Query:   19 QVANAEDDVPAHPPPFCIVPTQTSAAPAAXXXXXXXXXXQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEGSGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQ-HEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLLTLVAGGVRSAAA---ANTTTTRSVGTQTNTTSSVGGINSSWTCLPGDADCVSDDTDEATWT 296
            QV NAED    HP P  IVP Q SA                A+ L+  NKGVEALQEGSG                       G  TDVET + +  EFN N G FVAPLG G  SVDSAK SE D AFFATG A T+ + Q  H+HP  W K+F+    ++SGRKLL               L+   LEK++A++ DT TA+ L+   SL FGGK   LL  +  G  +A++   AN+T++ S GT +   S +G  +S  T +PGD       TDEATWT
Sbjct:   75 QVTNAEDVAAKHPLPGYIVPVQASA--------------DDADPLTA-NKGVEALQEGSG----------------------GGAGTDVETTMTSKAEFNRNAGTFVAPLGGG--SVDSAKTSEEDEAFFATGHADTRQQQQHLHQHPSGWTKSFKNVFTKSSGRKLL---------------LMAKDLEKMYAYVEDT-TAAALVFYASLRFGGKTPALLASLVTGAAAASSVVSANSTSSLSPGTTSADMSDIG--SSGTTSVPGDR------TDEATWT 293          
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: D7FU55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU55_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 3.210e-23
Identity = 92/226 (40.71%), Postives = 122/226 (53.98%), Query Frame = 0
Query:  113 TTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLL-TLVAGGVRSA-AAANTTTTRSVGTQTNTTSSVG-GINSSWTCLPGDADCVSDDTDEATWTWVEIITDILALTTVLRLLWFSAVWFGGTVTTCAMWASTM 335
            +T   N NGG FVAPLG G  SVDSAK SE D AFFATGDA T+ +   H++PP W K+F+    ++SGRKLL               L+   LEK++A++  T TAS LI   SL FGGK   LL +LV G   S+  +A +T+  S GT +   S +G G     T +PGD       TD+ATWT +  I  I     V  ++W S +W    +    +WA +M
Sbjct:    3 STAGLNRNGGTFVAPLGRG--SVDSAKTSEEDEAFFATGDADTRQQQHLHQYPPGWTKSFKNVFTKSSGRKLL---------------LMAKDLEKMYAYVEGT-TASALIFYGSLRFGGKTPALLASLVTGAAASSFVSAASTSGLSAGTTSADMSDIGSGKKGGTTSVPGDR------TDDATWTLLVWIISIGVAMVVAWIVWLSPLWV---LLNLLVWAESM 201          
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5K4I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I1_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 8.850e-21
Identity = 145/195 (74.36%), Postives = 149/195 (76.41%), Query Frame = 0
Query:  449 PGPVLRRARSYFERIVSNLTETAMVVGEAASNVGDAALELVVVVHPTPAAEXXXXXXXXXXXXXXAVGSPVAVSNTSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPYTTANDAAAVSAXXEGVXXXXXXXXXXXXXAGVGRPPVLLRSLSYFDRVVSNLTEAXXXXXXXXXXXXXXXXXXXSALDMV 643
            P PVLRRA SY ERIVSNLTETA+VVGEAASNVG AAL LV+VVHPTPA                AVGSPVAVSNT VAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      NDA     XX   XXXXXXXXXXXXX G GRPPVLLRSLSY DR+VS     XXXXXXXXXXXXXXXXXX +ALDMV
Sbjct:  111 PVPVLRRAWSYLERIVSNLTETAIVVGEAASNVGGAALALVMVVHPTPAEAE-------------AVGSPVAVSNTWVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDAXXXXXXXX-XXXXXXXXXXXXXXXGAGRPPVLLRSLSYLDRMVSXXXXXXXXXXXXXXXXXXXXXXXDNALDMV 291          
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5J5K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5K9_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.500e-9
Identity = 108/320 (33.75%), Postives = 139/320 (43.44%), Query Frame = 0
Query:    5 PSLLSSYLTATLREQVANAEDDVPAHPPPFCIVPTQTSAAPAAXXXXXXXXXXQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEGSGGCTDVETYVETT--NEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLL-TLVAG-GVRSAAAANTTTTRSVGTQTNTTSSVGGINSSWTCLPGDADCVSDDTDEATWTWVEIITDILALTTVLRL--LWFSA 318
            P LL++ ++     QV NAED V  HP    IVP Q +A                 E+    NKGVE LQEGS                     +G GG TDVET+V +T  N+FNGNGGAFVAP+G G  SVDSA +SE +A                                                GG  +R     G+EK    + DT TAS+ +   SL  GGK   LL TLV G G  S  AA TT+  S G    T++ +G  +S  T +PGD   ++DD   A ++W+  I    AL   +R+  LW  A
Sbjct:   61 PGLLNARVSND--NQVPNAEDVVAEHPLRGYIVPVQAAADD---------------EEHLAANKGVELLQEGS---------------------DGGGG-TDVETHVTSTCTNDFNGNGGAFVAPVGGG--SVDSAMNSEEEAFPM---------------------------------------------GGADIR-----GVEK----VCDT-TASLALRYASLRLGGKTPALLSTLVTGAGALSVVAAATTSCFSAGM---TSAEIG--SSKTTSVPGD---LADDATWALFSWITNIGAATALAWSMRVFALWVLA 276          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G964_ECTSI6.400e-13964.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2H8_9PHAE1.420e-4858.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZU3_9PHAE8.440e-3341.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FU55_ECTSI3.210e-2340.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4I1_9PHAE8.850e-2174.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J5K9_9PHAE2.500e-933.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 355..375
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..312
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 335..354
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..334
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 376..643
NoneNo IPR availableTMHMMTMhelixcoord: 354..376
NoneNo IPR availableTMHMMTMhelixcoord: 311..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1590contigEcto-sp13_S_contig1590:8212..16480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1590.4331.1mRNA_Ecto-sp13_S_contig1590.4331.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1590 6976..16524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1590.4331.1 ID=prot_Ecto-sp13_S_contig1590.4331.1|Name=mRNA_Ecto-sp13_S_contig1590.4331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=644bp
MSTPPSLLSSYLTATLREQVANAEDDVPAHPPPFCIVPTQTSAAPAAAPA
AEPAERAQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEG
SGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFAT
GDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRR
LLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLLTLVAGGVRSAAA
ANTTTTRSVGTQTNTTSSVGGINSSWTCLPGDADCVSDDTDEATWTWVEI
ITDILALTTVLRLLWFSAVWFGGTVTTCAMWASTMRTTRWSRRSRRSRRA
SVSPFIPGDAAVAVAVAATAVPVMAVPPTAAAASTASTASTAHVTATPAT
TATPNTAAAAAVAGTAGTAGTAARAGGEAVGEEAAAPATSSSAEPAPAPG
PVLRRARSYFERIVSNLTETAMVVGEAASNVGDAALELVVVVHPTPAAEA
EAEAEAEAEAEAEAVGSPVAVSNTSVAATTTVSAASPVIAASQEPAASTA
SATAAAPSTAVPYTTANDAAAVSAAAEGVVAGSSAEPPAAAAAGVGRPPV
LLRSLSYFDRVVSNLTEAVSAVSEAVANVGDAASNLGSALDMV*
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