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Homology
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: D7G964_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G964_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 6.790e-134 Identity = 394/613 (64.27%), Postives = 412/613 (67.21%), Query Frame = 3
Query: 96 EQVANAEDDVPAHPPPFCIVPTQTSAAPAAXXXXXXXXXXQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEGSGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLLTLVAGGVRSAAAANTTTTRSVGTQTNTTSSVGGINSS-WTCLPGDADCVSDDTDEATWTWVEIITDILALTTVLRLLWFSAVWFGGTVTTCAMWASTMRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGGEAVGEEAAAPATSSSAEPAPAPGPVLRRARSYFERIVSNLTETAMVVGEAASNVGDAALELVVVVHPTPAAEXXXXXXXXXXXXXXAVGSPVAVSNTSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---------------PYTTANDAAAVSAXXEG--VXXXXXXXXXXXXXAGVGRPPVLLRSLSYFDRVV 1880
+QVANAEDDVPAHPPPFCIVPTQT+A PAAXXXXXXXXXX E ST G V +LQEGSGG DVETYV+TT+EFNGNGG FVAPLG GTS VDSAK EG AFFATG A +MEHQQH+HPPDWM+AFERFRPRTSGRKLLGMA A A GGVVRR +T GLEKLHAH+ DTATASVLIGC SL FG KAV+LLTLVAGGVRSAA TR+VGTQTNTTSS+ GINS WTC PGDADC+SDDTDE TWTW E+ITD+LALTTVLR LW SAVW GGT TTC MWA T R+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A PVLRRARSY ERIVSNLTETAMVVGEAASNVGDAALELVVVV P A XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P TTA DA AV A EG XXXXXXAGVGRPPVLLRSLSY DR+V
Sbjct: 95 KQVANAEDDVPAHPPPFCIVPTQTTAEPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------QLSTEG---VEVLQEGSGGSADVETYVQTTHEFNGNGGGFVAPLGGGTS-VDSAKGLEGGEAFFATGGADARMEHQQHQHPPDWMRAFERFRPRTSGRKLLGMAKASAGSGGVVRRFMTKGLEKLHAHVADTATASVLIGCASLRFGSKAVLLLTLVAGGVRSAAXXXXXXTRTVGTQTNTTSSIEGINSGGWTCRPGDADCLSDDTDEKTWTWFEVITDVLALTTVLRFLWISAVWLGGTTTTCVMWARTRRSRSTRASVSPLIPTADAVVVAVAVAATAAPVIAAPPTAAAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------ASVPVLRRARSYVERIVSNLTETAMVVGEAASNVGDAALELVVVVRPAEAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNTTAYDAVAVPAAAEGEVAGSSAEPAXXXXXXAGVGRPPVLLRSLSYLDRMV 668
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5K2H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H8_9PHAE) HSP 1 Score: 178 bits (451), Expect = 2.020e-47 Identity = 104/177 (58.76%), Postives = 114/177 (64.41%), Query Frame = 3
Query: 249 GVEALQEGSG--IDIETTMASTN------------------------GLNR--------------VVLLQEGSGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTG 659
GVE LQEG G D+ETTM ST+ GL + V LLQEG GG DVET + +T+EF+GNGGAFVAPLG GTSSVDS K E D AFFATGDA T+MEH QH+HPPDWM+AFERFRPRTSGRKLLGMA A RGGGVVRRLLT G
Sbjct: 18 GVELLQEGGGGWADVETTMTSTDEFSGNGGAFVAPLGGGTSSVDSTKGLEKDEAFFATGDADTRGVELLQEGGGGWADVETTMTSTDEFSGNGGAFVAPLGGGTSSVDSTKGLEKDEAFFATGDADTRMEHHQHQHPPDWMRAFERFRPRTSGRKLLGMAKASTRGGGVVRRLLTKG 194
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5KZU3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU3_9PHAE) HSP 1 Score: 138 bits (348), Expect = 2.660e-32 Identity = 117/282 (41.49%), Postives = 146/282 (51.77%), Query Frame = 3
Query: 99 QVANAEDDVPAHPPPFCIVPTQTSAAPAAXXXXXXXXXXQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEGSGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQ-HEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLLTLVAGGVRSAAA---ANTTTTRSVGTQTNTTSSVGGINSSWTCLPGDADCVSDDTDEATWT 932
QV NAED HP P IVP Q SA A+ L+ NKGVEALQEGSG G TDVET + + EFN N G FVAPLG G SVDSAK SE D AFFATG A T+ + Q H+HP W K+F+ ++SGRKLL L+ LEK++A++ DT TA+ L+ SL FGGK LL + G +A++ AN+T++ S GT + S +G +S T +PGD TDEATWT
Sbjct: 75 QVTNAEDVAAKHPLPGYIVPVQASA--------------DDADPLTA-NKGVEALQEGSG----------------------GGAGTDVETTMTSKAEFNRNAGTFVAPLGGG--SVDSAKTSEEDEAFFATGHADTRQQQQHLHQHPSGWTKSFKNVFTKSSGRKLL---------------LMAKDLEKMYAYVEDT-TAAALVFYASLRFGGKTPALLASLVTGAAAASSVVSANSTSSLSPGTTSADMSDIG--SSGTTSVPGDR------TDEATWT 293
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: D7FU55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU55_ECTSI) HSP 1 Score: 112 bits (280), Expect = 7.260e-23 Identity = 92/226 (40.71%), Postives = 122/226 (53.98%), Query Frame = 3
Query: 381 TTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLL-TLVAGGVRSA-AAANTTTTRSVGTQTNTTSSVG-GINSSWTCLPGDADCVSDDTDEATWTWVEIITDILALTTVLRLLWFSAVWFGGTVTTCAMWASTM 1049
+T N NGG FVAPLG G SVDSAK SE D AFFATGDA T+ + H++PP W K+F+ ++SGRKLL L+ LEK++A++ T TAS LI SL FGGK LL +LV G S+ +A +T+ S GT + S +G G T +PGD TD+ATWT + I I V ++W S +W + +WA +M
Sbjct: 3 STAGLNRNGGTFVAPLGRG--SVDSAKTSEEDEAFFATGDADTRQQQHLHQYPPGWTKSFKNVFTKSSGRKLL---------------LMAKDLEKMYAYVEGT-TASALIFYGSLRFGGKTPALLASLVTGAAASSFVSAASTSGLSAGTTSADMSDIGSGKKGGTTSVPGDR------TDDATWTLLVWIISIGVAMVVAWIVWLSPLWV---LLNLLVWAESM 201
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5K4I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I1_9PHAE) HSP 1 Score: 102 bits (255), Expect = 3.270e-20 Identity = 122/165 (73.94%), Postives = 125/165 (75.76%), Query Frame = 3
Query: 1389 PGPVLRRARSYFERIVSNLTETAMVVGEAASNVGDAALELVVVVHPTPAAEXXXXXXXXXXXXXXAVGSPVAVSNTSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPYTTANDAAAVSAXXEGVXXXXXXXXXXXXXAGVGRPPVLLRSLSYFDRVVS 1883
P PVLRRA SY ERIVSNLTETA+VVGEAASNVG AAL LV+VVHPTPA AVGSPVAVSNT VAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NDA XX XXXXXXXXXXXXX G GRPPVLLRSLSY DR+VS
Sbjct: 111 PVPVLRRAWSYLERIVSNLTETAIVVGEAASNVGGAALALVMVVHPTPAEAE-------------AVGSPVAVSNTWVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDAXXXXXXXX-XXXXXXXXXXXXXXXGAGRPPVLLRSLSYLDRMVS 261
BLAST of mRNA_Ecto-sp13_S_contig1590.4331.1 vs. uniprot
Match: A0A6H5J5K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5K9_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 7.000e-9 Identity = 105/306 (34.31%), Postives = 132/306 (43.14%), Query Frame = 3
Query: 99 QVANAEDDVPAHPPPFCIVPTQTSAAPAAXXXXXXXXXXQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEGSGGCTDVETYVETT--NEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFATGDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRRLLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLL-TLVAG-GVRSAAAANTTTTRSVGTQTNTTSSVGGINSSWTCLPGDADCVSDDTDEATWTWVEIITDILALTTVLRL--LWFSA 998
QV NAED V HP IVP Q +A E+ NKGVE LQEGS +G GG TDVET+V +T N+FNGNGGAFVAP+G G SVDSA +SE +A GG +R G+EK + DT TAS+ + SL GGK LL TLV G G S AA TT+ S G T++ +G +S T +PGD ++DD A ++W+ I AL +R+ LW A
Sbjct: 73 QVPNAEDVVAEHPLRGYIVPVQAAADD---------------EEHLAANKGVELLQEGS---------------------DGGGG-TDVETHVTSTCTNDFNGNGGAFVAPVGGG--SVDSAMNSEEEAFPM---------------------------------------------GGADIR-----GVEK----VCDT-TASLALRYASLRLGGKTPALLSTLVTGAGALSVVAAATTSCFSAGM---TSAEIG--SSKTTSVPGD---LADDATWALFSWITNIGAATALAWSMRVFALWVLA 276
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3212 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Cds size | 1932 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462840.051283-UTR-Ecto-sp13_S_contig1590:6975..8211 | 1681462840.051283-UTR-Ecto-sp13_S_contig1590:6975..8211 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1590 6976..8211 - |
| 1681462840.1457462-UTR-Ecto-sp13_S_contig1590:16480..16524 | 1681462840.1457462-UTR-Ecto-sp13_S_contig1590:16480..16524 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1590 16481..16524 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462840.060864-CDS-Ecto-sp13_S_contig1590:8211..9216 | 1681462840.060864-CDS-Ecto-sp13_S_contig1590:8211..9216 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 8212..9216 - |
| 1681462840.0702844-CDS-Ecto-sp13_S_contig1590:9699..9803 | 1681462840.0702844-CDS-Ecto-sp13_S_contig1590:9699..9803 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 9700..9803 - |
| 1681462840.080434-CDS-Ecto-sp13_S_contig1590:11266..11409 | 1681462840.080434-CDS-Ecto-sp13_S_contig1590:11266..11409 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 11267..11409 - |
| 1681462840.089377-CDS-Ecto-sp13_S_contig1590:12278..12346 | 1681462840.089377-CDS-Ecto-sp13_S_contig1590:12278..12346 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 12279..12346 - |
| 1681462840.0983014-CDS-Ecto-sp13_S_contig1590:13480..13624 | 1681462840.0983014-CDS-Ecto-sp13_S_contig1590:13480..13624 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 13481..13624 - |
| 1681462840.108224-CDS-Ecto-sp13_S_contig1590:14004..14196 | 1681462840.108224-CDS-Ecto-sp13_S_contig1590:14004..14196 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 14005..14196 - |
| 1681462840.1214387-CDS-Ecto-sp13_S_contig1590:14885..14957 | 1681462840.1214387-CDS-Ecto-sp13_S_contig1590:14885..14957 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 14886..14957 - |
| 1681462840.1359344-CDS-Ecto-sp13_S_contig1590:16276..16480 | 1681462840.1359344-CDS-Ecto-sp13_S_contig1590:16276..16480 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1590 16277..16480 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1590.4331.1 >prot_Ecto-sp13_S_contig1590.4331.1 ID=prot_Ecto-sp13_S_contig1590.4331.1|Name=mRNA_Ecto-sp13_S_contig1590.4331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=644bp
MSTPPSLLSSYLTATLREQVANAEDDVPAHPPPFCIVPTQTSAAPAAAPA
AEPAERAQRAEQLSKENKGVEALQEGSGIDIETTMASTNGLNRVVLLQEG
SGGCTDVETYVETTNEFNGNGGAFVAPLGVGTSSVDSAKHSEGDAAFFAT
GDAHTKMEHQQHEHPPDWMKAFERFRPRTSGRKLLGMATACARGGGVVRR
LLTTGLEKLHAHIRDTATASVLIGCVSLLFGGKAVMLLTLVAGGVRSAAA
ANTTTTRSVGTQTNTTSSVGGINSSWTCLPGDADCVSDDTDEATWTWVEI
ITDILALTTVLRLLWFSAVWFGGTVTTCAMWASTMRTTRWSRRSRRSRRA
SVSPFIPGDAAVAVAVAATAVPVMAVPPTAAAASTASTASTAHVTATPAT
TATPNTAAAAAVAGTAGTAGTAARAGGEAVGEEAAAPATSSSAEPAPAPG
PVLRRARSYFERIVSNLTETAMVVGEAASNVGDAALELVVVVHPTPAAEA
EAEAEAEAEAEAEAVGSPVAVSNTSVAATTTVSAASPVIAASQEPAASTA
SATAAAPSTAVPYTTANDAAAVSAAAEGVVAGSSAEPPAAAAAGVGRPPV
LLRSLSYFDRVVSNLTEAVSAVSEAVANVGDAASNLGSALDMV* back to topmRNA from alignment at Ecto-sp13_S_contig1590:6976..16524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1590.4331.1 ID=mRNA_Ecto-sp13_S_contig1590.4331.1|Name=mRNA_Ecto-sp13_S_contig1590.4331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1590:6976..16524- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGGATGCGAGGTCAATGGTCTAACGACTACGACAGGCACGACTATGAGT
ACACCCCCCTCCTTGCTTTCGTCTTATCTAACGGCCACACTCCGAGAGCA
GGTAGCCAACGCCGAGGACGACGTCCCCGCGCACCCTCCGCCATTCTGCA
TCGTGCCCACCCAAACGTCTGCGGCACCTGCTGCGGCACCTGCTGCGGAA
CCTGCAGAACGTGCGCAACGTGCGGAACAGCTCTCAAAAGAGAACAAGGT
GCCTCTCGAACCAAATGATCTGTTTCTGGTGTATCGTTTCGACAGATCTC
CACCCACCCCTGTTGCGCGCAGGAGTATGCGCAGGCCTCGGAACACGGGG
GGTGTGCTTGCTGCTTGTATGACGTATGTATGTGTGATGGACACGGTGGT
TGGTCATGATACACGGAGCCTGCCTCTGGGGATTGGTGTGTGATCTGATG
ATTTGGGAGTTACGACGGATTCTGTCTGTGTATTGGGGCTCTCGTGGCTC
ATGTCTGCTCGGGTTTCGTGCATGTCAACACCAACTGATGCCCTAAAGGT
TATTAAAGCACGGCACATAAACATGTTCAAGACCATACCGATCGGCCGCT
AGGGTGTTAACGTGTGGTCACCCACAGAACACGCGAACACGATATATCAA
CGTTCGCGCGTTCGGTGGGTCACCAAACTGTTACGCTCTAACAATTGCAG
CCGATCCGTGTGGAGATGTACATGTATATGACGTGCTTCCCGTCAATGTT
TTTTGTGTTCGGTGAGTGACGAGACGTTAACACCCTAGCAACCGATCCTT
GTGGAGATACGTATTTGTGACGTGCTTGCACATGTTTGGGCATCAGCCGT
GTTGACATGCACGGGGCCCGAGCAGAAATGTTAGCCATGAGAGCCCCAAT
GCACGGACAGGGACCTCCGCCGTAACTCGCGAAACATCAGACCACAACAT
ACACAACCAATACCCCAAAAAGCAGGCTCCATGTATGATAACCGACCGCC
GTGTGTAGCATACATGTAAACAAAAAATAATACGATCGTTTCAAGAAAGA
AAGGCGCCGACTGTATGGATTGTTGAGTACGCCAGTTTGTTCGAATTGAA
TATAATGCGGTGTGGACGAAAATCCGGCGTCCTAAGCGATGCCCGTCGAA
ACCGACTGGTGCATGTGCATGGCCATTTTTTATTTTTTTCCATCCGAACG
AACACATTTGCCGGCTCTCGCTCTCTTCCCCCTTTTTTATGCGCAAGAAA
ACGCAAGAATGATTCAACACTACAATGCTTGTGAAACATAGCCTGGGCTG
GCGAAAACCCGGCATATTGCAGCTCCGTCCCGGGATCGTAGGGATGCGAA
GTCAATGGTCCATAACGATTGACGCGTGCGTTTACGTTGCACCCACCCTC
TCCCTCCGTCTTCTCGAGGACGCGTGGTCAACGGTCTAACGACTACGGCA
TGCGCAGACATCCCCCGCCCTCTTGCTCCGTCCTCTCGAGGACGCGTAGC
CATTGATCTCACGACTACGTGATGCGTCCCCACCCCTCCCCCCGTTCTAC
GCCCGCCTGATGGACAGGGAGTTGAAGCTCTCCAGGAAGGCAGCGGGATC
GACATTGAGACGACCATGGCCAGCACCAACGGACTCAACGTGCGTGTGGG
AAAACGTGTCATTCAAATGCACCCTCAAAGCTTCAAAGGGGGGAGGGGAG
GGGGGGGGCACCGTGGATGCGGCGGTCTTGCACGCTACCACAAATGAGTG
ACGATATTTATTACACGTCGCCTTTTTCTTGGTTGCTGGCTGTCAACGGT
GATGCAATCTGAGAGCCAGAATCCCCCCCGCCCCCGTTAGGCACGATTGT
TAATCGGTGATCGGTCCTGTGGGAACAATAATTAATGCTCCGTCCTCTTC
GAGGAGGACGCGTGATCAATGATCTAACCGCTAAGACTTGCAAAACATGA
GAGTACTCCCCCCGCGGATCGTGGCCACTGTGGTCAACTGATCGATGTAC
CAACGACTACGGTATACTTTTCATGAGTATCCCCCCCCCCTCGCTCGCTA
CGTCCAGGCGTTGCAGGGATGCGAGGTCAATCGTCTAAACGCTACTTAAG
AGGGGTGCCAAAACACATACACATACAGTACAAACAATTGCCTTCCCCGG
TCACTTCCTGTGCACATGTTGGATACTTTCACAGCATGCAGTTCGGGAAA
GTTTGGGTTAGGGATAGGGTCTGCGTACCCCCCGTTCCCTGTTCTACTTC
ATCATAAATCTGTAAATGTGGCGACGGCGCCGTTACAATCTCCCCCCCCC
CCCCCCCTCCCTGCCCCCTGATCAATAGCGAGTTGTACTCCTCCAGGAAG
GCAGCGGTGGCTGTACCGACGTCGAGACGTACGTGGAGACCACGAATGAG
TTTAACGGAAACGGGGGGGCGTTCGTTGCACCCCTGGGTGTCGGCACCTC
CTCCGTGGATTCGGCGAAGCACTCGGAGGGGGACGCGGCGTTCTTCGCTA
CGGGGGATGCCCATACAAAGGTGGGCGTTTTTGTTTGTTTTTTCGACTCG
GCTGCAATATTCGCCTGTGGCATCCACGAGAAAACTATATGAACGTGATG
TGCGTGTGTGTGCGTTTTTTTTTTTCTGTTTTATTTCAAGAGTAGCATGG
CATTGTTGTTATTTTACGTGATAGCGATAGCGATGATGCCTGCCCCACAC
CGACTACATGCCACTGCTACCACCACCATCTCCACCTCCGATGCCGCCAC
GCTGAGGATAAAAGTTAGAGTTTTTTTCTTGAGCCTGTTCGCCGTCTGTC
CTCCTCGTCCTCGTCCTCCTCCGCATCCCCCTCTTTTTGCTGTCCACGTG
TTGCGGTGACGATGATATGTTGCTGCGGAAAAATTCGGGTGCCGCTTCAG
ATGGAGCATCAGCAGCACGAGCACCCGCCTGACTGGATGAAGGCCTTCGA
GAGGTTCCGCCCCAGGACTAGCGGCCGCAAGCTCCTAGGCATGGCCACGG
CCTGCGCCCGCGGCGGCGGCGTTGTCAGACGGTTGCTGACCACGGTAAGG
AACGGCAAAAAGTTCGATTCTTTCTTCCGGTGCTGGCACCTTTTCGGGGG
TTGTTGACCAGGACAAGTCGCACACCGGTAGATGGACCCCAAAGAGTTTG
AAGTCTCGTGTGCGGGGAGCTATGGAAGGGGTTTTTGAGACCAGGGGGAA
AAGCACAACGGTAGATTGGAAAGGCACAACGAACGGCAAAGAGTTAAATG
CTTTCTCGTGTGTGTGCTGGTAACGTTTTCAGGGGTTGTTGGTCAAGGTG
AAGGAAAGGCACAACCGACGGGAAGGAGTTTGATGTTTTCTAGTGTCCAG
GCGGCGGCGGCGGCGGCTTGCGCAGCTGCAACCCGTATCGGTGACTTCGA
TCCCAGCCACGCGGCGTAGTCGTGTCGATAATTTATCGGCACAAAAAAAA
TCTTAATCTTCCTCCGTTGTTTGTCCGAGGGTTGTTGACTCCAAAGGTGA
GGCAAGGCACAACGAACGGCATAAGAGTTGCGTTTCTCGTCTGTGGGCAG
GAATCCTTTTTGCGGGAGTGCTTGCCCGAGAAAAAGAGCACAACGGAAAG
ACAGATGGTACCGAAGAGTTTGATGTTGTCGTGTACGTGCAGACAGCTTG
TGGGAGTCGTGAGCCTGTTTGGTGACTTCGACCCCAGCCGTTAATTGGCA
CAGAAAACCTACCCTACACGAGCGAAGTCAGTTGGGGGTTGGGATGTTCT
CGCCGCCGTTCTTGCTTGTTGCGCTGCCGTGGACGACGCCTCTTGTTGCG
CGTTAGGTCAGTTTTCGCCTGGCATATGTATCGCCTGTACAGAGGCGGTT
TTGAGAGAGGGTGTGGGGGCCACAGACCCACTGGAAGAAGTTTCCTTGTT
TTCCGTGGCATGGGCGACGACTCTAATAGTGCGTCAGGTCGGCTGTGTGT
AGCACCACCCGAGGCGTTATTGAGAGGGCACGGGGGGACACAACCGCCCA
CAATCCGAGCCCACCGCTCCTGTTGAAGTAGTGTGCGTGTGCGTGTGGAC
ATGCAATGCGTGCCCAAGCTTGAGTTGGATTTGCTCTCCATTTCTCAACG
ACATGTCATCCTCCTTCATGGTCATTCCTCCGCTGCCGTTTCGCGTGCCG
CCCTTCCCGAAAATGAAAACAAACGCAGGGCTTGGAGAAGCTGCACGCCC
ACATCCGAGACACCGCCACGGCCTCGGTGTTGATCGGTTGCGTCAGGTGT
GTGAGTGTGCCGTTGTCGATATTCCAAGGTGTACGTGTAGGCTTCGCGCC
CGTGCTCACCGTACATGACACAAGATAACACACCCCCTGGGCAGATTTTC
AAAGCTCCATGATTTTTCGGCAGCAGAAAGAGTCGCGGCGCCGAAAATGC
AGGTTTAAGTAAAGTTCGATCGAGAGCTTTCTGATAATGTATCGTTTTGT
TTAGTTAGTGTGCATCCTCTCTTCGTCGTGGAGTGATCGAGCTTTGAAAA
TCGGTCGAGGGCGTGTGTAATCTCGTATCTTGTACGCGAAGGACCTCTGG
TATTGGCCGTGTGGCTGGGGTCCATCTTGCCTTTGTGTCGACTACGAATG
GCCCGCAATAAAGGTTCATAGGGGTGTTTTTTTTTAATCGGAGGGCATGG
GTTTTTGGTGGGGGTGGTTCTTAACGGGGGTCACATCTGATGGTGCTCAG
GCTCCCGTGTCTGATAGGGTACACTTGAATCATGTACAGAAGTAGTTCTT
GGCTGCCAACGTTTGAGGTAGCGGCGGCGCGAGAAACAACAAACGTAGTT
CGAAGTATGTACTTGAGGTGTTGGAGAGCTACGTAGCTCGGACCTATCAC
TAGAAATAGGCTGTTTTGCGTGCTGCAGTTGCCGTTGCTCTGTATCATCA
TGGTGCTGAGGCGGCAAGGGTTTTCGTGAGTGCACGCTGGCCGGGTTAGT
GGTCTCACCAGCCAGGGTAACACCGCACGCACGTGGTGCATGGTGAATCG
CCATCACGAAAAACAAACACCGCTCACCTACGATGATCAAGCTGCTGCTG
ACGTCACCGTTTCCTCCTACACTTTTTGTACCGTCTGTCTGTGTCCGTTG
TCATGGCGGCGGCAGCCTTCTCTTCGGAGGCAAGGCCGTGATGCTGCTTA
CGCTCGTGGCGGGGGGCGTACGGTCGGCTGCGGCTGCCAACACCACGACG
ACGAGAAGCGTGGGGACGCAGACCAACACGACCTCAAGCGTCGGAGGCAT
CAACTCAAGTGAGAGACATGTTCCACATAATATCGCTGTAGGGAAGTCCT
CTTTTAGTCATAATCCTCTGTCACTTCTTTTCCTTCACTTTGAGGCCCGC
ATGTCCCAAACAAATCTTGTCTCGTCTTGCGCATATCAGTAGAGGCCGTG
CCTTGTGAATCATGTCTCTCTTTTATTCACTAGGGAGCATACTGTTCAGA
AATTCCAAGTGGACTATAGTCTATCCGGTTCTTCGTATTATTCATTGCCA
TCCCAAGAAAAACTGCTTTCACCTGCAGGCATTTGCTGCGTGCGGTGCTT
GAGAAAAATATTTTGCAATTCTATAGACTGCATACAGTAAATCCCATATC
ATCACTATTTCCTGCCCAAGAAACTGAAAAATACACAAAACCATTCCCCA
AAACACAATCAATCAAAACACTACCAGCCTTTTTATATCAGTGGGCTGAA
CGTCAATGAAAAGAAAAACTCATAGTCCAAGCAGTTTTTTTTGTTTTGAC
TTGTATACCTTGTGTAGCGTGGAAGGCCGCGCTTCGGCTTGCTGTGAGCA
TCGATGCTTTTGGAATCATTTCATGTATCGTGGGAGGCAGCGCTTCGGTA
TGTTGTGCGCATCGACACTCTTGTCGGACGAAAGTGTCGATGCGCACAAC
ATACCGAAGCGCTGCCTCGAACAATGGAAGAGATGGTACCAAAGTGTCGA
TGCTCATAACAAGCCGAAGCGCGACCGTCCACGCAGCTCGAAGTACAGGT
GGACCATACCAAAAAGCTACGAAAGAATGGTCGGGTGTTTCGGTGTTTAT
GTTCATTTGCGATTAGCCCGAAGATAAGAAGTTTGACAGGGCGCAGCCAA
GCATACTGGGGATCGTCCAAACGAGCGGCGTGCCCCCTCTCTCCCCAGTA
AACACCTTTACGCAGCGGCGCCCTTGCACGCGAGTACACTGCTGCATATC
ATTTTTTTTATTTACCTCGTGCCATAGACATAACATCCACAACACGCCAC
CACTTCATGTAGAACTACTGGTATGATAGTAGTTACGAACTTGAGCCTTC
AAACCAATGTCCAAAAATCTTTGCATACATAGCAAGAGGTGCTCCGTCAA
GAGCCCTGTACAAAAACCGATGTATGTGATCGTAGCCGTTAGCCGTTAGC
CGTTAGGATGCAGCAGTACCCCGCAGACAAAGATAGGAGATGAGCCTCGG
CCATGTACAGTAACTAGTGGTCCCGGTTAATGCCGGTCGTGCGATCCATC
AGATTCAACCGGCATTATAGCGGGCAACCGGCATTAGTTAGAGTCCCAAA
TAAGTCGAATATTGCATGTGCGCCAGACGACTTCACCGGCATCTTCCAGG
GCTCCAACCGCCATTATTGCACGCTACTGCGGCACTACTACTACTACTAC
TGCTGTATGAGATCCTTACGCGTGATGGCGCGTGCATTTTTTTTTGTTCT
GTGCACGATGTGTCGCCACAGGTTGGACTTGCCTTCCTGGGGACGCGGAC
TGCGTTTCCGACGACACCGACGAGGCGACATGGACGTGGGTCGAGATCAT
CACAGACATCCTGGCGCTGACAACGGTAAGCAAGCAAGCATGGGTTGCAG
CCGTACCCCCCGTTCGTTTGATCTTGGCTATTACCGTTTACCGCAGGTGA
CGCACGTGAGATATCACCCCCACCCCCGCCCAGGGAAATATTTTCTCTCT
TTAAAGCACATGCTGCTCGGGTAATCGTGGAAATTCAGGTAACCTTCCCT
GACGCTTGTATGGATATTTGCTAGATCTATCTTTGGACTATTTTCTACAG
ACAGAGAGGGATTCGTTGGGACGTTTTTGGAAATAGAACAGGGAGAGGTA
CGCAGACCCTATCCTAATAACATGTTTTCCTTACTTACAAAAACCCTCCG
AAGTTTTGCTGATCGTGGTCGTCATCGCCAGTGCCACCGCCAGCGCCACC
GCCAGCGCCCATGCTTACTGCTCCCGTAACCACCGCCACAAACCGCCGTG
CGCGTTTCAACGGGATGATGTCTGTCCGGCGTGTGTCTCTGCGTGACTCC
CTTGTCAGGTGCTCCGGTTGCTCTGGTTTTCCGCCGTCTGGTTCGGAGGC
ACGGTAACGACTTGCGCCATGTGGGCTAGCACGATGAGAACGACGAGGTG
GAGCAGGAGGAGCCGGAGGAGCCGGAGGGCATCGGTCTCGCCCTTCATCC
CCGGCGACGCCGCCGTCGCCGTCGCCGTCGCCGCTACGGCCGTCCCGGTG
ATGGCCGTACCTCCGACCGCGGCGGCGGCATCTACGGCGTCTACGGCATC
TACGGCGCACGTAACCGCAACGCCTGCGACGACTGCCACGCCCAACACCG
CCGCCGCTGCTGCCGTCGCCGGCACCGCCGGCACCGCCGGAACTGCGGCT
CGGGCAGGGGGGGAGGCGGTGGGGGAGGAGGCGGCGGCACCGGCAACGTC
TTCTTCGGCCGAACCCGCCCCCGCCCCCGGGCCCGTGCTCCGACGCGCGC
GGTCCTACTTCGAGCGCATCGTGTCCAACCTGACGGAGACGGCGATGGTC
GTGGGCGAGGCCGCCTCCAACGTGGGCGACGCTGCTCTGGAGTTGGTGGT
GGTGGTGCACCCGACGCCGGCGGCGGAGGCGGAGGCGGAGGCGGAGGCGG
AGGCGGAGGCGGAGGCGGAGGCGGTGGGATCTCCGGTCGCGGTGTCCAAC
ACGTCCGTTGCTGCCACCACCACCGTCTCCGCCGCCTCCCCTGTCATTGC
CGCATCTCAGGAACCGGCGGCGTCTACAGCGTCCGCAACAGCAGCAGCCC
CTTCGACGGCCGTGCCTTACACTACCGCCAACGATGCTGCTGCGGTATCG
GCGGCGGCGGAGGGGGTGGTGGCCGGTTCCTCGGCCGAACCTCCCGCCGC
CGCCGCCGCCGGGGTGGGCCGGCCGCCCGTGCTCCTTCGCTCGCTGTCCT
ACTTCGACCGCGTGGTGTCCAACCTGACAGAGGCCGTCTCTGCCGTCAGC
GAAGCCGTCGCCAACGTTGGCGACGCCGCCTCCAACCTGGGCAGCGCGCT
GGACATGGTGTAGGCCGCCGGCGTCGATTACACACACCTCAGTGGTTGCG
GTGGTGTCGTAGTTGCGTGCGTGCTTGGGGGCTCGATGGGATGCTTGTGT
GTAGACAGCCATGATACCGAAAGCACCGCAAGGGAAGGGGGGAAAGAGCG
CGGAACAATTCAGGCGGTTCTTGTTCGTAAATATACTGAGGTGCCGCCGC
CGGTGCTGCAGTAGCGTGCGGTTGTTCTTGTGGCTGTCGAATTGTGAGTT
GCCACTGCCTGTGCAGCTGCGGCGTGTGGTTGTTGTTGTGCGCGTCGAAT
CGTGAGGTGCCACCGCCGGTGTTTCTGTGGCGTGTGGTTGTTGTTGTGCG
GGTCGAATCATATGGTGAGTTTTTGTCTAGATGGATGAGCGGTGTGGACC
GGCCGGGGTACGTATCTACCATCACCGTGCCGTACCGCCCTTGTTTCTTT
CTTCATTGTGTTGATGAACGTACGTACGTCATCATGATGTGCTTCCTTCC
CTTGGCGCACTTGGCGTGCTGGAGAAGCAGCAGCGCAATGCGCGCCGTTC
ATGAGAGGACACTCTTTGACCGCTCGATTACGCGCACGGCGTTTCGTTCC
TTTTGTTGAAAATTTTGTGCACTGCGTGCTCTGTTCGAACGGGTGTCGGA
AGTTACCACTTTTCGTTTTTTCGTGAGCGCGCTTTCGTTTTGGATAATTA
GTAATTAATTGATTTTTAGTTCTCCGGGGGGGGGGGGATGGAACCTTGTC
GGATATCATTCCCCACCGCCGTGGAGGCGGTTCTCTCGATTGCGGCAGTC
GCTCGCTTCCGTCGTCGATTCGGCGCCCGGGTGGTTCAACGGCAGCAGCA
GCGATACAAAGAAGGCTCCAAGAGGTCTTTTGAATGTGCGAGGTGTATGG
GCGAAGCCTTCCCAATGGGATAAATACCGCAGTGAGCGGGGGCAGCCTCG
TGCATCAGCCGTGCAAACGAAGGGTAGGGGTTCATTGAACACGAGCAGTG
TGTGTGGGCGAAGCCTCGTAAATCATCAGCAGTGCAAACAAGGCTAGAGG
CCGTTTGAACTCGGACAGCGTGTGGGCGAAGCCTCTGCGAATCAATGAAT
GCAGTAGATGTGGGCGGAGCCTTGTGAATGTTCAGCAGTGCGAACAAGAT
TAAAAATTCATGGAAGACGAGCAGGGTGTGGGCGAAAGAAGCCTCTCCGA
ATGAATGGGTGGAGGGTGTGGGTGGGCGAAAAGTAGCTTTTTTCTTGTC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1590:6976..16524- >mRNA_Ecto-sp13_S_contig1590.4331.1 ID=mRNA_Ecto-sp13_S_contig1590.4331.1|Name=mRNA_Ecto-sp13_S_contig1590.4331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1932bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1590:6976..16524- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGTACACCCCCCTCCTTGCTTTCGTCTTATCTAACGGCCACACTCCG
AGAGCAGGTAGCCAACGCCGAGGACGACGTCCCCGCGCACCCTCCGCCAT
TCTGCATCGTGCCCACCCAAACGTCTGCGGCACCTGCTGCGGCACCTGCT
GCGGAACCTGCAGAACGTGCGCAACGTGCGGAACAGCTCTCAAAAGAGAA
CAAGGGAGTTGAAGCTCTCCAGGAAGGCAGCGGGATCGACATTGAGACGA
CCATGGCCAGCACCAACGGACTCAACCGAGTTGTACTCCTCCAGGAAGGC
AGCGGTGGCTGTACCGACGTCGAGACGTACGTGGAGACCACGAATGAGTT
TAACGGAAACGGGGGGGCGTTCGTTGCACCCCTGGGTGTCGGCACCTCCT
CCGTGGATTCGGCGAAGCACTCGGAGGGGGACGCGGCGTTCTTCGCTACG
GGGGATGCCCATACAAAGATGGAGCATCAGCAGCACGAGCACCCGCCTGA
CTGGATGAAGGCCTTCGAGAGGTTCCGCCCCAGGACTAGCGGCCGCAAGC
TCCTAGGCATGGCCACGGCCTGCGCCCGCGGCGGCGGCGTTGTCAGACGG
TTGCTGACCACGGGCTTGGAGAAGCTGCACGCCCACATCCGAGACACCGC
CACGGCCTCGGTGTTGATCGGTTGCGTCAGCCTTCTCTTCGGAGGCAAGG
CCGTGATGCTGCTTACGCTCGTGGCGGGGGGCGTACGGTCGGCTGCGGCT
GCCAACACCACGACGACGAGAAGCGTGGGGACGCAGACCAACACGACCTC
AAGCGTCGGAGGCATCAACTCAAGTTGGACTTGCCTTCCTGGGGACGCGG
ACTGCGTTTCCGACGACACCGACGAGGCGACATGGACGTGGGTCGAGATC
ATCACAGACATCCTGGCGCTGACAACGGTGCTCCGGTTGCTCTGGTTTTC
CGCCGTCTGGTTCGGAGGCACGGTAACGACTTGCGCCATGTGGGCTAGCA
CGATGAGAACGACGAGGTGGAGCAGGAGGAGCCGGAGGAGCCGGAGGGCA
TCGGTCTCGCCCTTCATCCCCGGCGACGCCGCCGTCGCCGTCGCCGTCGC
CGCTACGGCCGTCCCGGTGATGGCCGTACCTCCGACCGCGGCGGCGGCAT
CTACGGCGTCTACGGCATCTACGGCGCACGTAACCGCAACGCCTGCGACG
ACTGCCACGCCCAACACCGCCGCCGCTGCTGCCGTCGCCGGCACCGCCGG
CACCGCCGGAACTGCGGCTCGGGCAGGGGGGGAGGCGGTGGGGGAGGAGG
CGGCGGCACCGGCAACGTCTTCTTCGGCCGAACCCGCCCCCGCCCCCGGG
CCCGTGCTCCGACGCGCGCGGTCCTACTTCGAGCGCATCGTGTCCAACCT
GACGGAGACGGCGATGGTCGTGGGCGAGGCCGCCTCCAACGTGGGCGACG
CTGCTCTGGAGTTGGTGGTGGTGGTGCACCCGACGCCGGCGGCGGAGGCG
GAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGTGGGATC
TCCGGTCGCGGTGTCCAACACGTCCGTTGCTGCCACCACCACCGTCTCCG
CCGCCTCCCCTGTCATTGCCGCATCTCAGGAACCGGCGGCGTCTACAGCG
TCCGCAACAGCAGCAGCCCCTTCGACGGCCGTGCCTTACACTACCGCCAA
CGATGCTGCTGCGGTATCGGCGGCGGCGGAGGGGGTGGTGGCCGGTTCCT
CGGCCGAACCTCCCGCCGCCGCCGCCGCCGGGGTGGGCCGGCCGCCCGTG
CTCCTTCGCTCGCTGTCCTACTTCGACCGCGTGGTGTCCAACCTGACAGA
GGCCGTCTCTGCCGTCAGCGAAGCCGTCGCCAACGTTGGCGACGCCGCCT
CCAACCTGGGCAGCGCGCTGGACATGGTGTAG back to top
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