prot_Ecto-sp13_S_contig1590.4330.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1590.4330.1
Unique Nameprot_Ecto-sp13_S_contig1590.4330.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length234
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1590.4330.1 vs. uniprot
Match: D7G965_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G965_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 1.130e-73
Identity = 137/204 (67.16%), Postives = 144/204 (70.59%), Query Frame = 0 
Query:   32 MTTAAHQFATAALT--AARAHFASGGGSVSLGQNKTAILLHVVCIAALMVGGASADPSPAMAAIADDLVIGEEACSSRWDANCDGDTMDEVLFWLALWIWRVYRLYACLRSLWAVAVWLTGTAFFVDARRRASSFLIGRGGGASGVAARMPPLGGLGGDGGVAVPPIMRNLGEEEGDVELAVISPRSPVAVAAVVEQHPLPLPQ 233
            MTTAAHQ AT AL   AA AHFAS GGSVSLG NKTA+   VVC+AAL+VGGA AD SPAMAA ADDLVIGEEACSSRWDANCDGDTMDEVLFWL LWIWR Y+LYAC RS+ A AVWLTGTAFF+DAR                                     IMRNL E+E DVELAVISPRSPVA AAV EQHPLPLPQ
Sbjct:    1 MTTAAHQSATTALALAAALAHFASSGGSVSLGHNKTAL---VVCMAALLVGGAWADSSPAMAATADDLVIGEEACSSRWDANCDGDTMDEVLFWLVLWIWRGYKLYACARSVRAAAVWLTGTAFFIDARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIMRNLEEKEDDVELAVISPRSPVAAAAVAEQHPLPLPQ 201
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BLAST of mRNA_Ecto-sp13_S_contig1590.4330.1 vs. uniprot
Match: A0A6H5K376_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K376_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 4.540e-59
Identity = 112/161 (69.57%), Postives = 114/161 (70.81%), Query Frame = 0 
Query:   74 IAALMVGGASADPSPAMAAIADDLVIGEEACSSRWDANCDGDTMDEVLFWLALWIWRVYRLYACLRSLWAVAVWLTGTAFFVDARRRASSFLIGRGGGA-SGVAARMPPLGGLGGDGGVAVPPIMRNLGEEEGDVELAVISPRSPVAVAAVVEQHPLPLPQ 233
            +AALMVGGASADPSPAMAA ADDLVIGEEACSSRWDANCDGDTMDEVLFWLALWIWR Y+LYA                                GGGA  G       LGGLGGDGGVAVPPIMRNL EEE DVELAVISPRSPVA AA VEQHPLPLPQ
Sbjct:    1 MAALMVGGASADPSPAMAATADDLVIGEEACSSRWDANCDGDTMDEVLFWLALWIWRAYKLYA--------------------------------GGGALRGQQLACRHLGGLGGDGGVAVPPIMRNLEEEEDDVELAVISPRSPVAAAAAVEQHPLPLPQ 129
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1590.4330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G965_ECTSI1.130e-7367.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K376_9PHAE4.540e-5969.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1590contigEcto-sp13_S_contig1590:756..3773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1590.4330.1mRNA_Ecto-sp13_S_contig1590.4330.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1590 756..3773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1590.4330.1 ID=prot_Ecto-sp13_S_contig1590.4330.1|Name=mRNA_Ecto-sp13_S_contig1590.4330.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=234bp
SRISVRLALYKVEQLVLRVQEYHFEKGTKPKMTTAAHQFATAALTAARAH
FASGGGSVSLGQNKTAILLHVVCIAALMVGGASADPSPAMAAIADDLVIG
EEACSSRWDANCDGDTMDEVLFWLALWIWRVYRLYACLRSLWAVAVWLTG
TAFFVDARRRASSFLIGRGGGASGVAARMPPLGGLGGDGGVAVPPIMRNL
GEEEGDVELAVISPRSPVAVAAVVEQHPLPLPQ*
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