prot_Ecto-sp13_S_contig159.4327.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig159.4327.1
Unique Nameprot_Ecto-sp13_S_contig159.4327.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length642
Homology
BLAST of mRNA_Ecto-sp13_S_contig159.4327.1 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI)

HSP 1 Score: 832 bits (2148), Expect = 1.630e-296
Identity = 518/685 (75.62%), Postives = 535/685 (78.10%), Query Frame = 0
Query:    1 MKPFTIVSVLLGLLVPGSATIAKTAKQQQIEIPEGGHTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNKSEPKPTDFPTYRSCSDCTTTLQVVCRSGLPKFCSKVDRSCLGSDGTLS------------------------------------------VGILCNNYERACASANSVCSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---GTATCASHGVVGIESSNKKVCCDVRCGACGGVGCSKFGEAYGLGQSYCCASXXXXXXXXXXXXXXXXXXXXIDDESNXXXXXXXXXXXXXXXXXXXGEGSATCASYGVVGVESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVKQGESCAATGMAPCYIDTDDESDYXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTATCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEVYGLDASHCCSNEIVDDGESCSATGMAPCFMESDDDDSIEDIVAPASDDGGAQSCGRDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCTGALTYIEDKAEHILEYGEDAVINFCPQSEVSDLAECH 640
            MK   IVS LLGLLVPGSAT+A+TAKQQQIEIPEGG+TFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNK EPKPTDFPTY SCSDCTTTLQ VC SGLPKFCS +DRSCLGSDGTLS                                          VGI  +N +  C      C                                              XXXXXXXXXXXXXXXXXXXXXXXXXXX    GTATCASHGVVGIESSNKKVCCD+RCG CGGVGCSKFGEAYGLG+S CCAS                     D+ES+XXXXXXXXXXXXXXXXX    GSATCAS+GVVG+ESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIV++GESCAATGMAPCYID+DDES    XXXXXXXXXXXXXXXXXXXXXXXXGEGTA CASYGVVGIESSNQKACCDVRCGACGGVGCSKFGE YGLDAS+CCSNEIVDDGESCSATGMAPCFMESDD DSIEDIVAPASDDGGA SC  DSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTC GALTYI+DKAEHILEYGEDAVINFCPQSEVSDLAECH
Sbjct:    1 MKSSMIVSALLGLLVPGSATMAETAKQQQIEIPEGGYTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNKLEPKPTDFPTY-SCSDCTTTLQAVCHSGLPKFCSTIDRSCLGSDGTLSESSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATCASHGVVGIESSNKKVCCDLRCGTCGGVGCSKFGEAYGLGESSCCASTITDDGESCAVTGMAPCFIDSDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTATCASHGVVGIESSNKKVCCDLRCGTCGGVGCSKFGEAYGLGESSCCASTITDDGESCAVTGMAPCFIDSDNESSXXXXXXXXXXXXXXXXX----GSATCASHGVVGIESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVREGESCAATGMAPCYIDSDDES----XXXXXXXXXXXXXXXXXXXXXXXXGEGTAMCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEAYGLDASYCCSNEIVDDGESCSATGMAPCFMESDD-DSIEDIVAPASDDGGAPSCSMDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCAGALTYIDDKAEHILEYGEDAVINFCPQSEVSDLAECH 675          
BLAST of mRNA_Ecto-sp13_S_contig159.4327.1 vs. uniprot
Match: A0A6H5KWI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI6_9PHAE)

HSP 1 Score: 822 bits (2122), Expect = 2.820e-294
Identity = 505/641 (78.78%), Postives = 518/641 (80.81%), Query Frame = 0
Query:    1 MKPFTIVSVLLGLLVPGSATIAKTAKQQQIEIPEGGHTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNKSEPKPTDFPTYRSCSDCTTTLQVVCRSGLPKFCSKVDRSCLGSDGTLSVGILCNNYERACASANSVCSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTATCASHGVVGIESSNKKVCCDVRCGACGGVGCSKFGEAYGLGQSYCCASXXXXXXXXXXXXXXXXXXXXIDDESNXXXXXXXXXXXXXXXXXXXGEGSATCASYGVVGVESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVKQGESCAATGMAPCYIDTDDESDYXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTATCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEVYGLDASHCCSNEIVDDGESCSATGMAPCFMESDDDDSIEDIVAPASDDGGAQSCGRDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCTGALTYIEDKAEHILEYGEDAVINFCPQSEVSDLAECHD 641
            M+ FTIVS LLGLLVPGSAT+AKTAKQQQI+IPEGGHTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNKSEPKPTDFPTYRSCSDCT TLQVVCRSGLPKFCS VDRSCLG DG LSVGILC  YERACASANSVCSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    T TCASHGVVGIESSNKKVCCDVRCG CGGVGCSKFGE YGLG+SYCC S                     DD+  XXXXXXXXXXXXXXX    GEGS TCASYGVVG+ESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVKQGESCAATGMAPCYID+DDE DY    XXXXXXXXXXXXXXXXX     GEGTA CASYGVVGIESSNQKACCDVRCG CGGVGCSKFGE YGLDAS+CCSNEIVDDGESCSATGMAPCF+ES                GGAQSC RDSLND DQQQL LY+NDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFL    AL +++         GEDAVINFCPQSEVSDLAEC D
Sbjct:    1 MRSFTIVSALLGLLVPGSATMAKTAKQQQIQIPEGGHTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNKSEPKPTDFPTYRSCSDCTATLQVVCRSGLPKFCSTVDRSCLGRDGALSVGILCGKYERACASANSVCSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------TPTCASHGVVGIESSNKKVCCDVRCGTCGGVGCSKFGEEYGLGESYCCTSTITDDGESCADTGMAPCYIDSDDDXXXXXXXXXXXXXXXXX----GEGSTTCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVKQGESCAATGMAPCYIDSDDEWDYESKDXXXXXXXXXXXXXXXXXS----GEGTAMCASYGVVGIESSNQKACCDVRCGTCGGVGCSKFGEAYGLDASYCCSNEIVDDGESCSATGMAPCFIES----------------GGAQSCSRDSLNDVDQQQLNLYENDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFL----ALAHVK---------GEDAVINFCPQSEVSDLAECRD 568          
BLAST of mRNA_Ecto-sp13_S_contig159.4327.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 2.460e-41
Identity = 92/178 (51.69%), Postives = 116/178 (65.17%), Query Frame = 0
Query:    5 TIVSVLLGLLVPGSATIAKTAKQQQIEIPEGGHTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNKSEPKPTDFPTYRS-----CSDCTTTLQVVCRSGLPKFCSKVDRSCLGSDGTLSVGILCNNYERACASANSVC 177
            T V VLLG L    AT+A+ A Q++IEIP GG+TFK+S FDDGR TPYRV+F D +LTGSSYR + DG V+YFKAG E Y DR  ++D SI F+  PSE RK   K  P+P D   + S     C++CT  +   C SGLP+FC+ VDRS LG+DG  S+  LC+NY+  C      C
Sbjct:    6 TTVGVLLGQL-SSLATVAQAA-QKKIEIPAGGYTFKLSLFDDGRTTPYRVFFADEYLTGSSYRLSADGHVQYFKAGAELYFDRMVQDDNSITFSKKPSESRKH-GKGRPEPHDDYDFSSSEANFCTECTEAITATCYSGLPEFCTMVDRSILGNDGLQSMRALCHNYKEVCTIVEDSC 180          
BLAST of mRNA_Ecto-sp13_S_contig159.4327.1 vs. uniprot
Match: D8LDU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU5_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.020e-30
Identity = 55/94 (58.51%), Postives = 73/94 (77.66%), Query Frame = 0
Query:  546 AQSCGRDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCTGALTYIEDKAEHILEYGEDAVINFCPQSEVSDLAEC 639
            A+ C   SL+DA Q+QL++YD D+YLE DCVN ++P+P+ CNYMGLGQECRGCF+TC GA  Y++D AE I  +G DA+++FCP +EV  L EC
Sbjct:   22 AEECIVSSLSDAAQEQLSMYDKDLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMTCDGATRYLDDFAEEISVWGVDAIVHFCPDAEVELLEEC 115          
BLAST of mRNA_Ecto-sp13_S_contig159.4327.1 vs. uniprot
Match: D7FIS5_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS5_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 9.050e-23
Identity = 118/271 (43.54%), Postives = 138/271 (50.92%), Query Frame = 0
Query:  255 TCASHGVVGIESSNKKVCCDVRCGACGGVGCSKFGEAYGLGQSYCCASXXXXXXXXXXXXXXXXXXXXIDDESNXXXXXXXXXXXXXXXXXXXGEGSATCASYGVVGVESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVKQGESCAATGMAPCYIDTDDESDYXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTATCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEVYGLDASHCCSNEIVDDGESCSATGMAPCFM 525
            TC S G+ G++  N  VCC + CG C G GCS  G A GL  S CC                         ++   XXXXXXXXXXXXXX        TC S G+ G++  N   CC + CG C G GCS  G A GL +  CC   I   G  C  TG+APC   +   +D XXXXXXXXXXXXXXXXXX             TC S G+ GI+   +  CC +RCG CGG GCS  G   GL A  CCS+EI D G  C  T  APC +
Sbjct:  359 TC-SDGIEGLDG-NGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAPDAGDDXXXXXXXXXXXXXXV------GTC-SDGIEGLDG-NGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGRIKSSGNYCDDTGVAPCIYGSAPNADDXXXXXXXXXXXXXXXXXXEN-----------TC-SNGLEGIDHKGE-VCCPLRCGQCGGSGCSTSGASNGLGADSCCSSEINDSGRHCDDTNEAPCII 606          
BLAST of mRNA_Ecto-sp13_S_contig159.4327.1 vs. uniprot
Match: A0A6H5KP24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP24_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.640e-10
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 0
Query:  564 LYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCTGALTYIEDKAEHILEYGEDAVINFCPQSE 632
            +YD  +YLE DCVN ++P+P+ CNYMGLGQECRGCF+          DK   ++  G+   + FCP +E
Sbjct:    1 MYDKGLYLEPDCVNGASPMPVHCNYMGLGQECRGCFM----------DKEIAVVR-GDRGGMCFCPLAE 58          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig159.4327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LDU6_ECTSI1.630e-29675.62N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KWI6_9PHAE2.820e-29478.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFX1_9PHAE2.460e-4151.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDU5_ECTSI1.020e-3058.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIS5_ECTSI9.050e-2343.54FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KP24_9PHAE4.640e-1046.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 323..329
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..641
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig159contigEcto-sp13_S_contig159:6760..13340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig159.4327.1mRNA_Ecto-sp13_S_contig159.4327.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig159 5805..13340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig159.4327.1 ID=prot_Ecto-sp13_S_contig159.4327.1|Name=mRNA_Ecto-sp13_S_contig159.4327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=642bp
MKPFTIVSVLLGLLVPGSATIAKTAKQQQIEIPEGGHTFKISHFDDGRAT
PYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTST
PSEPRKDLNKSEPKPTDFPTYRSCSDCTTTLQVVCRSGLPKFCSKVDRSC
LGSDGTLSVGILCNNYERACASANSVCSDVCAEESSDDTSDDFSDDSSDD
TSDDSSDDTSDDSIDDTSDDSSDDSSDDTSDDTSDDSSDDSSDESSDGSG
GGTATCASHGVVGIESSNKKVCCDVRCGACGGVGCSKFGEAYGLGQSYCC
ASXXXXXXXXXXXXXXXXXXXXIDDESNDDSKDESEDEPRDESKDESGEG
SATCASYGVVGVESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSN
DIVKQGESCAATGMAPCYIDTDDESDYESKDQSKDESMDESKDESTDEST
DKSGEGTATCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEVYGLDA
SHCCSNEIVDDGESCSATGMAPCFMESDDDDSIEDIVAPASDDGGAQSCG
RDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFL
TCTGALTYIEDKAEHILEYGEDAVINFCPQSEVSDLAECHD*
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