mRNA_Ecto-sp13_S_contig159.4328.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: D8LDU7_ECTSI (BSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU7_ECTSI) HSP 1 Score: 602 bits (1552), Expect = 1.670e-204 Identity = 531/693 (76.62%), Postives = 535/693 (77.20%), Query Frame = 2
Query: 164 MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSSYDDSEDEEAEGERRRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNEDXXXXXXXXXXXXXXXXXXXXXADSNYHGADDHLPSXXXXXXXXXXXXXXXXXAPARDLPPHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTLASAAAMAEISRLTAALRASEXXXXXXXXXXXXXXXXXXEVDEVTRQRDAAVAEADQLRSSLRQLQSEHRETVNKATADLDAAGGAEQELRRQLAEAEAAAEEGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSAELSRLKKAFREERAEHEAMLLASSRQAANEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKSKGAMXXXXXXXXXXEDLRRAAECEREAAERADSEARQQADVVKQLREEIRVLQAAAEQPRXXXXXXXXXXXX---RGPMTGAVSRRGKITARTDIGGGVGGGEDTDGWGEDEDDSCGASVNTSSSGVVVDRPLSATSPSGDGGTPRSHGARRGSVEGDGGGGRASGIAXXXXXXXXXXXXXXXXXXXXXXSGEGDGEDGWEGWD 2233
MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSS AEGER RQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKED VVT+IHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNEDXXXXXXXXXXXXXXXXXXXXXAD N HGADD LPS APARDL PHAG XXXXXXXXXXXXXXX VKTLASAAAMAEISRLTAALRASEXXXXXXXXXXXXXXXXXXEVDEVTRQRDAAVAEADQLRSSLRQLQ+EH+ETVNKATADLDAAGGAEQELRRQLAEAEAAAEEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSRLKKAFREERAEHEAMLLAS RQAANE LAKSKGAM EDLRRAAECEREAAERA EARQ+ADVVKQLREEIRVLQAAAEQPR XXXXXXXXX RGPMTGAVSRRGKI ARTDIGG SCGASVNTSSSGVVVDRPLSATSPSGDGGTPRS GA RGSVEGDG XXXXXXXXXXXXX SGEGDGEDGWEGWD
Sbjct: 1 MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSSXXXXXXXXAEGERNRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDTVVTKIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNEDXXXXXXXXXXXXXXXXXXXXXADFNDHGADDDLPSPPSRSSPSATAAAR---APARDLSPHAGDGAAGPPGGALGAMRPDSPXXXXXXXXXXXXXXX--VKTLASAAAMAEISRLTAALRASEXXXXXXXXXXXXXXXXXXEVDEVTRQRDAAVAEADQLRSSLRQLQTEHQETVNKATADLDAAGGAEQELRRQLAEAEAAAEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LSRLKKAFREERAEHEAMLLAS-RQAANEAVEAALSSADADREEACAELEASMKAEAERKDQELEALRAQLAKSKGAMEEVSALRADVEDLRRAAECEREAAERAAGEARQEADVVKQLREEIRVLQAAAEQPRVSAXXXXXXXXXXXARGPMTGAVSRRGKIAARTDIGGXXXXXXXXXXXXXXXXXSCGASVNTSSSGVVVDRPLSATSPSGDGGTPRSQGAGRGSVEGDGXXXXXXXXXXXXXXXXXXXXXXRSRREGGCGSGEGDGEDGWEGWD 685
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A6H5JV15_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV15_9PHAE) HSP 1 Score: 216 bits (551), Expect = 4.330e-63 Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 2
Query: 287 YDDSEDEEAEGERRRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNE 622
YDDSED+EAEG RRRQPVTAAIRAIRADIKTYTEDVP+SQSERFSAFVAKFDLGARTKDVATILKEDPVVT+IHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNE
Sbjct: 10 YDDSEDDEAEGGRRRQPVTAAIRAIRADIKTYTEDVPDSQSERFSAFVAKFDLGARTKDVATILKEDPVVTKIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNE 121
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A6H5KP84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP84_9PHAE) HSP 1 Score: 174 bits (441), Expect = 1.080e-42 Identity = 189/269 (70.26%), Postives = 192/269 (71.38%), Query Frame = 2
Query: 689 ADSNYHGADDHLPSXXXXXXXXXXXXXXXXXAPARDLPPHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTLASAAAMAEISRLTAALRASEXXXXXXXXXXXXXXXXXXEVDEVTRQRDAAVAEADQLRSSLRQLQSEHRETVNKATADLDAAGGAEQELRRQLAEAEAAAEEGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSAELSRLKKAFREERAEHEAMLLASSRQAANE 1495
AD N HGADD LPSXXXXXXXXXXXXX APAR L PHAG XXXXXXXXXXXXXXX VKTLASAAAMAEISRLTAALRASE +VDEVTRQRDAAVAEADQLRSSLRQLQSEH+ETVNKATADLDAAG AEQELRRQLAEAEAAAEEGRAR XXXXXXXXXXXXXXXXXXXXX SSAELSRLKKAFREERAEHEAML+AS RQAANE
Sbjct: 194 ADCNDHGADDDLPSXXXXXXXXXXXXXG---APARYLSPHAGGGVAGPPGGALGAMRPDSXXXXXXXXXXXXXXX---VKTLASAAAMAEISRLTAALRASEAERASASAVEGSRGGDGGKVDEVTRQRDAAVAEADQLRSSLRQLQSEHQETVNKATADLDAAGDAEQELRRQLAEAEAAAEEGRARVAAAEKEVRAHAAARAAAGERKEAVAXXXXXXXXXXXXXXXXXXXXX-SSAELSRLKKAFREERAEHEAMLVAS-RQAANE 454
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A7S3YEL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEL0_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 7.650e-21 Identity = 49/141 (34.75%), Postives = 84/141 (59.57%), Query Frame = 2
Query: 155 PYKMWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSSYDDSEDEEAEGERRRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEK 577
P +MW IR+DL EFV + D ++ +A + D +++E E R+ + AA++A++ DI TY E++ + + F F + D+ A+TK+++ +LK +PVV ++ TQLVP+ ++YD FWTRY+FR +
Sbjct: 5 PSRMWNAIRRDLAEFVNVVATDTTAKLEE-VAEEVSKRIPLPDEEDIPDEKEQEQLRKTRLEQAALKALQNDINTYQEEISDQELMEFRMFEQRLDVSAKTKEISELLKSNPVVAQLQTQLVPDEISYDTFWTRYYFRVSR 144
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A6U4E8C6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4E8C6_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.880e-20 Identity = 56/144 (38.89%), Postives = 88/144 (61.11%), Query Frame = 2
Query: 164 MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSSYDDSEDEEAEGERRRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDL--GARTKDVATILKEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEKVAKG 589
MW I +DL EFV+T+ DD I A ++G E D ++ S + V AA++ +RAD+KTYTE +P ++ F AF+ FDL A + D++ +L+EDP ++++HT++VP ++Y+ FWTRYFFR K+ +G
Sbjct: 1 MWSAITRDLQEFVSTVADDTTAVI----AGKDGAESDGENGGTVSPSTPSTN---ASDVPAAVKLLRADLKTYTEPIPAAEQADFEAFLDGFDLMGEASSADISQLLEEDPTLSQVHTEVVPRVVSYEAFWTRYFFRLSKLQQG 137
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A7S2WTQ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ6_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.610e-19 Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 2
Query: 164 MWGLIRKDLGEFVTTLK---DDAAVTIKSAMALREGEEEDYDSSYDDSEDEEAEGERRRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEKVAKGKAGGGMSFPNED 625
MW +I++DL EFVT +K ++AA + SA+ + + D S +A +RA++AD KTY++ V + F +F KFDL +T ++ +L ++PVV IH +LVPEH++ + FW RYFFRAE+ K + F +E+
Sbjct: 36 MWSVIQRDLAEFVTVVKSGTEEAAANVVSAVRQADAPQGKQDRS------------------SAGLRALQADKKTYSDPVANADQAHFQSFSTKFDLAEKTTTISELLSDEPVVARIHAELVPEHVSAETFWMRYFFRAERFMKPGQSLALGFVDEE 174
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A6H5JSM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM7_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.750e-14 Identity = 41/44 (93.18%), Postives = 41/44 (93.18%), Query Frame = 2
Query: 164 MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSSYDD 295
MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEED DSS D
Sbjct: 1 MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDDDSSIID 44
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A7S0WDX3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WDX3_9CRYP) HSP 1 Score: 75.9 bits (185), Expect = 2.970e-11 Identity = 46/144 (31.94%), Postives = 76/144 (52.78%), Query Frame = 2
Query: 179 RKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSSYDDSEDEEAEG---------ERRRQP-VTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDPVVTEIHTQLVPEHLTYDDFWTRYFFRAEKV 580
++DLGEF + +K DAA I+S + ++ EA+ +++QP V+ + A+R TYT D P+ + + AF KFD RT ++ +L+ +P + E+H +L PE +TY FW+RYFFR + +
Sbjct: 25 KRDLGEFASQVKHDAAAVIESEFGDDTAPPKPKPKPVTPAKRAEAKAVNKAVSRVAAKKQQPGVSPKLAALREASVTYTHDPPDKAA--YEAFAEKFDAKERTSEITEMLRSNPAMEELHRKLCPEQVTYKAFWSRYFFREQAL 166
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A7S2DKM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKM4_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 7.360e-9 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 2
Query: 179 RKDLGEFVTTLKDDAAVTI-----KSAMALREGEEEDYDSSYDDSEDEEAEGERRRQPVTAAIRAIRADIKTYTEDVPESQSERFSAFVAKFDLGARTKDVATILKEDP 490
++DLGEFV+T+K DA + K + A+ G SE A+ ++ P A +RA+RADIKTY+ + + +++ F F +F + ++T DV+ ILKEDP
Sbjct: 1 KRDLGEFVSTVKVDAGTAVSNTVEKVSSAVAVG---------GTSESATAKPSIQKLPQNANLRALRADIKTYSAVISDEEAQSFETFSGRFSVSSKTLDVSKILKEDP 100
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Match: A0A1W0A1Z8_9STRA (BSD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1Z8_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.000e-8 Identity = 28/61 (45.90%), Postives = 45/61 (73.77%), Query Frame = 2
Query: 386 EDVPESQSERFSAFVAKFDLGARTKDVATILKEDPVVTEIHTQLVPEHLTYDDFWTRYFFR 568
+++ + E + AF FDL +T++VA+ILKED ++++HT +VPE L+Y +FWTRY+FR
Sbjct: 52 DEIIFEELEDYKAFQDVFDLDDKTEEVASILKEDEYISDLHTAMVPEQLSYKEFWTRYYFR 112 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig159.4328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig159.4328.1 >prot_Ecto-sp13_S_contig159.4328.1 ID=prot_Ecto-sp13_S_contig159.4328.1|Name=mRNA_Ecto-sp13_S_contig159.4328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=691bp MWGLIRKDLGEFVTTLKDDAAVTIKSAMALREGEEEDYDSSYDDSEDEEAback to top mRNA from alignment at Ecto-sp13_S_contig159:16853..25297- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig159.4328.1 ID=mRNA_Ecto-sp13_S_contig159.4328.1|Name=mRNA_Ecto-sp13_S_contig159.4328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8445bp|location=Sequence derived from alignment at Ecto-sp13_S_contig159:16853..25297- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig159:16853..25297- >mRNA_Ecto-sp13_S_contig159.4328.1 ID=mRNA_Ecto-sp13_S_contig159.4328.1|Name=mRNA_Ecto-sp13_S_contig159.4328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2073bp|location=Sequence derived from alignment at Ecto-sp13_S_contig159:16853..25297- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |