prot_Ecto-sp13_S_contig1589.4322.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1589.4322.1
Unique Nameprot_Ecto-sp13_S_contig1589.4322.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: D7G7X0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X0_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 4.440e-37
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ
Sbjct:  474 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 541          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: A0A6H5JN56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN56_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.220e-36
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ
Sbjct: 1329 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 1396          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: A0A7S0GAW7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAW7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.690e-36
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQ++PI A RFI EDTVEERI++LQ
Sbjct:   29 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQYRPIRAVRFIAEDTVEERILQLQ 96          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: A0A6V1NWH0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWH0_HETAK)

HSP 1 Score: 125 bits (315), Expect = 1.960e-34
Identity = 60/68 (88.24%), Postives = 64/68 (94.12%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLLISLKAGGVALNLTVANHIFLMDPWWNPA EMQAIDRTHR+GQ KPI A RF+IEDTVEERI++LQ
Sbjct:  145 VLLISLKAGGVALNLTVANHIFLMDPWWNPAGEMQAIDRTHRIGQAKPIRAVRFVIEDTVEERILRLQ 212          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: A0A7S0AJ66_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AJ66_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.120e-34
Identity = 57/68 (83.82%), Postives = 64/68 (94.12%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLL+SLKAGGVALNLTVANH++LMDPWWNPAAEMQAIDRTHRLGQ +PI A RFI E+TVEERI++LQ
Sbjct:   11 VLLMSLKAGGVALNLTVANHLYLMDPWWNPAAEMQAIDRTHRLGQHRPIRAVRFIAENTVEERILQLQ 78          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: A0A397BBU2_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BBU2_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.220e-33
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            V LISLKAGGVALNLTVA+HIFLMDPWWNPAAE QAIDRTHRLGQFKPI ATRF+I +T+EERI+KLQ
Sbjct:  135 VFLISLKAGGVALNLTVASHIFLMDPWWNPAAEHQAIDRTHRLGQFKPIRATRFVIANTIEERILKLQ 202          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: A0A7S2E9R3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E9R3_TRICV)

HSP 1 Score: 122 bits (306), Expect = 3.370e-33
Identity = 58/68 (85.29%), Postives = 65/68 (95.59%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLL+SLKAGGVALNLTVANHI+LMDPWWNPAAEMQAIDRTHRLGQ++PI A RFI E+TVEERI++LQ
Sbjct:  135 VLLMSLKAGGVALNLTVANHIYLMDPWWNPAAEMQAIDRTHRLGQYRPIRAIRFIAENTVEERILQLQ 202          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: W7TXY3_9STRA (Snf2 super family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXY3_9STRA)

HSP 1 Score: 127 bits (320), Expect = 9.990e-33
Identity = 59/68 (86.76%), Postives = 67/68 (98.53%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLLISLKAGGVALNLT ANHI+LMDPWWNPAAEMQAIDRTHR+GQ+KPI+ATRFI+E+T+EERI+KLQ
Sbjct: 1061 VLLISLKAGGVALNLTHANHIYLMDPWWNPAAEMQAIDRTHRIGQYKPIFATRFILENTIEERILKLQ 1128          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: A0A836CRA2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.860e-32
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            VLLISLKAGGVALNLTVA++ FLMDPWWNPAAEMQAIDRTHR+GQFKPI+A RFIIEDT+EERI+KLQ
Sbjct:  900 VLLISLKAGGVALNLTVASYCFLMDPWWNPAAEMQAIDRTHRMGQFKPIHAVRFIIEDTIEERILKLQ 967          
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Match: R1CDK1_EMIHU (Helicase C-terminal domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CDK1_EMIHU)

HSP 1 Score: 116 bits (290), Expect = 4.000e-32
Identity = 54/68 (79.41%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQ 68
            V+LISLKAGGVALNLTVA+HI+LMDPWWNPAAE QAIDR HRLGQ KPI A RF++ +TVEERI++LQ
Sbjct:   21 VILISLKAGGVALNLTVASHIYLMDPWWNPAAEYQAIDRAHRLGQHKPIRAVRFVVRNTVEERILRLQ 88          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1589.4322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7X0_ECTSI4.440e-37100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN56_9PHAE1.220e-36100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0GAW7_9STRA2.690e-3689.71Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6V1NWH0_HETAK1.960e-3488.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0AJ66_9STRA6.120e-3483.82Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A397BBU2_9STRA1.220e-3386.76Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S2E9R3_TRICV3.370e-3385.29Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
W7TXY3_9STRA9.990e-3386.76Snf2 super family n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A836CRA2_9STRA1.860e-3288.24P-loop containing nucleoside triphosphate hydrolas... [more]
R1CDK1_EMIHU4.000e-3279.41Helicase C-terminal domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..68
e-value: 1.9E-31
score: 111.2
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 1..68
NoneNo IPR availablePANTHERPTHR45626:SF12DNA REPAIR PROTEIN RAD16coord: 1..68
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..44
e-value: 1.4E-6
score: 28.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..68
score: 9.687
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1589contigEcto-sp13_S_contig1589:4..328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1589.4322.1mRNA_Ecto-sp13_S_contig1589.4322.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1589 4..328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1589.4322.1 ID=prot_Ecto-sp13_S_contig1589.4322.1|Name=mRNA_Ecto-sp13_S_contig1589.4322.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
VLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIY
ATRFIIEDTVEERIIKLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase