prot_Ecto-sp13_S_contig15888.4321.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15888.4321.1
Unique Nameprot_Ecto-sp13_S_contig15888.4321.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length215
Homology
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 399 bits (1026), Expect = 2.910e-140
Identity = 204/214 (95.33%), Postives = 207/214 (96.73%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDMEHPAGVDVTSSHK 214
            SLLESRPL TKAVTSGAIAFAGDVSCQLLALEVAKREEE+SSAQDVDE E HEPFGDGGARSVASEIDWGRTLRFT VGAAVVAPALHAWYGFLI+RLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADY TT+VSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNK VLKDMEHPAGV VTSSHK
Sbjct:    4 SLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEHHEPFGDGGARSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGVGVTSSHK 217          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 4.460e-140
Identity = 205/214 (95.79%), Postives = 206/214 (96.26%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDMEHPAGVDVTSSHK 214
            SLLESRPL TKAVTSGAIAFAGDVSCQLLALEVAKREEE SSAQ VD+HEQHEPFGDGGA SVASEIDWGRTLRFT VGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAP FLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNK VLKDMEHPA VDVTSSHK
Sbjct:   75 SLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHVDDHEQHEPFGDGGATSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAAVDVTSSHK 288          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: A0A6A3NKH9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKH9_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.560e-50
Identity = 93/194 (47.94%), Postives = 120/194 (61.86%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSN 194
            SLLE+ PL+TK  T GAIA  GD+ CQL+                ++E E+H+P            +D  R   FT +G  +++P LH WYGFL  RLPG + A V KR+ALDQL FAP FL VFLS+V+ L+GN  +I  KLRAD+ T   +NWG W+PAQ++NFRFV    QVL++N VG  WN YLSY S+
Sbjct:   42 SLLETHPLSTKIATGGAIAGLGDMGCQLV----------------LEEKEKHKPL-----------LDVKRAAIFTFLGGFLISPVLHVWYGFLGSRLPGVSAAAVAKRLALDQLGFAPTFLPVFLSSVLTLEGNKEQIPDKLRADWWTVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSH 208          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.760e-48
Identity = 104/230 (45.22%), Postives = 132/230 (57.39%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASE-------------------IDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPG-TAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDMEHPAGVDVT 210
            +LL SRPL TK VT+  IA  GDV+CQL     A  EE    AQ  ++   H P   GG  SV++                    +D  RT +F L+ AA+ AP+ H WY  L + + G TA    VKR+ALDQ LFAP F+ +F S +M+++G AAKI +KL+ DY  T+V NWG W+PAQ+INFR V   YQVL+AN VGFFWN  +S Q  K  L D E P  V  T
Sbjct:   30 ALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEE----AQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTET 255          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: W2Q4U2_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q4U2_PHYPN)

HSP 1 Score: 164 bits (415), Expect = 3.020e-47
Identity = 96/208 (46.15%), Postives = 125/208 (60.10%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDMEHPAGVD 208
            SLLE+ PL+TK VT GAIA  GDV CQL                 V E E      DG A+     +D  R   FT +G  +++PALH WYGFL  RLPG + A V KR+ALDQL FAP FL + LS+V++L+G++  I  KLRAD+ +   +NW  W+PAQ++NFRFV    QVL+AN +G  WN YLSY S+  V K + +   V+
Sbjct:   47 SLLETHPLSTKIVTGGAIAGLGDVGCQL-----------------VLESE------DGDAK-----LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSEDIPDKLRADWWSVTKANWVVWVPAQILNFRFVPGSMQVLFANVIGLLWNAYLSYVSHSEVPKTLLNEKDVE 226          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 161 bits (407), Expect = 3.940e-46
Identity = 88/190 (46.32%), Postives = 116/190 (61.05%), Query Frame = 0
Query:    2 LLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSY 191
            LLE+ PL TK +T+GAIA   DV+CQ+            S   D D +           +S+   +DW RT  FT+V   +  P  H WYGFL  ++ GT     +KRV LDQ+LFAP  LA F S V+L++G + +I  KLR D PTT+++N+  WIPAQ+INF+FV   Y+VL+AN VGFFWNIYLSY
Sbjct:   38 LLETHPLMTKCITAGAIAAVADVTCQV------------SFPSDEDAN-----------KSLLERMDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLSY 204          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: A0A329SFZ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFZ2_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.150e-45
Identity = 96/199 (48.24%), Postives = 116/199 (58.29%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLK 199
            SLLE+ PL TK VT GAIA  GDV CQL+ LEV                       D  AR      D  RT  FT +G  +++P LH WYGFL  RLPG +   V KR+ALDQL FAP FL V LS+V+ L+G+A  I  KLRAD+     +NW  W+PAQ++NFRFV    QVL++N VG  WN YLSY S+  V K
Sbjct:   40 SLLETHPLRTKIVTGGAIAGLGDVGCQLV-LEVE----------------------DDDAR-----FDVKRTAIFTFLGGFLISPVLHVWYGFLGSRLPGVSTTAVAKRLALDQLGFAPTFLPVILSSVLALEGHAEDIPNKLRADWWPLTKANWVVWVPAQILNFRFVPGSMQVLFSNVVGLLWNAYLSYVSHSEVPK 210          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: A0A0P1ASJ6_PLAHL (Peroxisomal membrane mpv17 pmp22-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASJ6_PLAHL)

HSP 1 Score: 160 bits (404), Expect = 1.670e-45
Identity = 92/201 (45.77%), Postives = 119/201 (59.20%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDM 201
            SLLE+ P++TK VT G IA  GDV CQL  LE                        DG A+     +D  RT  FT +G  V++P LH WY FL  RLPG + A + KR+ALDQL FAP FL +FLS+V+ L+G+A  I  KLR+D+     +NW  W+PAQ+ NFRFV    QVL++N +G FWN YLSY S+  V+K +
Sbjct:   47 SLLETHPISTKIVTGGTIAGLGDVGCQLF-LE----------------------SDDGHAK-----LDIKRTAIFTFLGGVVISPILHVWYRFLGSRLPGVSTAAITKRLALDQLGFAPTFLPIFLSSVLTLEGHAEDIPDKLRSDWWPITKTNWVVWVPAQLFNFRFVPGSLQVLFSNVMGLFWNAYLSYMSHSKVVKKL 219          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: D0MT87_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT87_PHYIT)

HSP 1 Score: 159 bits (403), Expect = 2.110e-45
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLK 199
            SLLE+ PL TK VT GAIA  GDV CQL                 V E E      DG A+     +D  RT+ FT +G  +++P LH WYGFL  RLPG + + V KR+ALDQL FAP FL + LS+V+ L+G+A  I  KLRAD+   + +NW  W+PAQ++NFRFV    QV+++N VG  WN YLSY S+  V K
Sbjct:   47 SLLETHPLKTKIVTGGAIAGLGDVGCQL-----------------VLEGE------DGDAK-----LDVKRTVIFTFLGGLLISPVLHVWYGFLGSRLPGVSTSAVAKRLALDQLGFAPTFLPIILSSVLTLEGHAEDIPDKLRADWWPLMKANWVVWVPAQILNFRFVPGSMQVIFSNVVGLLWNSYLSYVSHSQVPK 217          
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Match: A0A662Y1B5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1B5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.250e-45
Identity = 86/191 (45.03%), Postives = 115/191 (60.21%), Query Frame = 0
Query:    1 SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSY 191
            +LLE+ PL+TK VT GAIA AGDVSCQL                + D++                + D  R   FT +G A+++P LH WYGFL + +PG +   +VKR+ALDQL+FAP FL VF S+++ L+G+  ++  KLRAD+     +NW  W+PAQ+INFRFV    QVL+AN VG  WN YLSY
Sbjct:   44 TLLETHPLSTKIVTGGAIAGAGDVSCQLFI--------------EADDN---------------GKFDVKRAAIFTFLGGALISPVLHVWYGFLGKLVPGVSSRAIVKRLALDQLVFAPTFLCVFFSSLLTLEGHLDQLPEKLRADWWPATKANWAVWVPAQIINFRFVPGSLQVLFANVVGLVWNSYLSY 205          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15888.4321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTH2_ECTSI2.910e-14095.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL95_9PHAE4.460e-14095.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3NKH9_9STRA3.560e-5047.94Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A835YKC9_9STRA3.760e-4845.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W2Q4U2_PHYPN3.020e-4746.15Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A4Q2YFM0_9BACT3.940e-4646.32Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
A0A329SFZ2_9STRA1.150e-4548.24Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A0P1ASJ6_PLAHL1.670e-4545.77Peroxisomal membrane mpv17 pmp22-like protein n=1 ... [more]
D0MT87_PHYIT2.110e-4547.24Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A662Y1B5_9STRA3.250e-4545.03Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 134..190
e-value: 1.8E-21
score: 76.1
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 2..197
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 2..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..74
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 110..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15888contigEcto-sp13_S_contig15888:1..2328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15888.4321.1mRNA_Ecto-sp13_S_contig15888.4321.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15888 1..2328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15888.4321.1 ID=prot_Ecto-sp13_S_contig15888.4321.1|Name=mRNA_Ecto-sp13_S_contig15888.4321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
SLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHE
QHEPFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPG
TAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTT
VVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKD
MEHPAGVDVTSSHK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22