mRNA_Ecto-sp13_S_contig15886.4319.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15886.4319.1
Unique NamemRNA_Ecto-sp13_S_contig15886.4319.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A6H5J5Q6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J5Q6_9PHAE)

HSP 1 Score: 746 bits (1927), Expect = 7.960e-267
Identity = 394/418 (94.26%), Postives = 399/418 (95.45%), Query Frame = 1
Query:    1 AGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASTDGGSAGLDVDAGGGDVGNEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEK 1254
            AGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRG HQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQA+ADAVGVPVPFGFKADHLLLDGGGGGDL S HEE+GV+AGRG A AAAGEAE VVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRG +N   EA EAGAPVVVLREGAMVRAAL RGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAAS       LDVDAGGGDVG+EEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEK
Sbjct:  151 AGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGGGGGDLPSVHEEEGVEAGRGEATAAAGEAEAVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATN---EAGEAGAPVVVLREGAMVRAALLRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASAXXXXXXLDVDAGGGDVGDEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEK 565          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A836CF87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF87_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.060e-35
Identity = 158/528 (29.92%), Postives = 205/528 (38.83%), Query Frame = 1
Query:    1 AGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAP-GYCSREAAEGLARKAYARAVSLCVAES-----------------------PDRGPH--------------------------VLPDRRVIA------VGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGA---------------------------------------------------MVRAALPRGA-TVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASTDGGSAGLDVDAGGGDVGNEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGG--VGWPYPVAVTKAPLFSEK 1254
            AGGQA++WLLGVPGASA LLEATVPY   +    M   + AP   CS EAA  +AR+AY RA+ L VAE                        P RG H                          V+ D+  +       VG TAA+ S++P+RG H+C+V A  A G   Y LTL+KGRRDR+GEDA VSRL+L+AV +      P  F    LLLD        SA +                        E VP A     PDA++ L+AG  G  LV+P    G  +AA                                                                    M+   LP  A  ++ PGS+NPLH GHV L++AA++   A    +S                                           SAG          G++        +  +FE+SV+N DKG L   E+ RRV QF+  GG  +G  Y VA+T APLF +K
Sbjct:   14 AGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEP-----PEAFLRAALLLDXXXXXXXXSAPQPP----------------------EAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACY-ARTQADS-------------------------------------------SAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQK 470          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A7S2DDP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDP4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.860e-32
Identity = 121/420 (28.81%), Postives = 177/420 (42.14%), Query Frame = 1
Query:    1 AGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARS--LLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASTDGGSAGLDVDAGGGDVGNEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEK 1254
            AG  A SWLLGVPGASA +LE  VPY   +    +  G     +C  E A  +A KAY RA+ L + ++ D  PH +     + V  T A++SS P+RG H+ +V A+TA G   Y L L+KG RDR GE+   SRL+++A+A+A   PV   F A  LL                              E E V      PT+       A+++L++ +    LV+P  +   S   G  +   A  + + +       +P   ++++PGS+NP+H+GHV + + A+   +L A   GE+  G+    PP                                                            I EIS  N DK  +G + +  RV    + G       VAVT APLFS+K
Sbjct:   72 AGSTAGSWLLGVPGASASVLEMCVPYAKASLAKFL--GGEPKHFCCEETAVAMAEKAYERALHLWMMDN-DGNPHCVGGENFMGVSITGAIVSSTPKRGEHRVHVAAKTALGTTTYTLCLAKGERDRVGEEHVASRLVIRAIAEAAQTPVSDEFSACSLL------------------------------EGEVVQGPIFTPTSS------ALQKLLSSKLSNVLVLPLGSMP-STPQGPGAATTATALEIAD------FIPARKSILVPGSFNPIHQGHVEMAKKAQQQVILTAAAAGEAEDGDAGITPPI-----------------------------------------------------------ILEISAFNADKPTIGYDAVADRVRLIQKAG-----LAVAVTNAPLFSDK 381          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A1Y1HLY0_KLENI (CTP_transf_like domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HLY0_KLENI)

HSP 1 Score: 114 bits (286), Expect = 1.070e-24
Identity = 97/288 (33.68%), Postives = 132/288 (45.83%), Query Frame = 1
Query:   10 QAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLL 873
            QA+SWLL VPGAS+ LLEAT PY  +A    +A G     + S+  A  +A KAY RA+ L        GP V     V  +GCT A++S  P+RG H+C+V A+T +      + L KG RDR GED   SRLLLQA+A+A GVP       D  L D                            EA+ +  +    T   + D + +E+L+         +P    G+S                         L     VILPGS+NPLH GH+G+++AA  L+
Sbjct:   29 QALSWLLSVPGASSTLLEATTPYSRRALH--LALGKEPEQFASQATANDMALKAYNRALMLA-------GPGV----PVAGIGCTCAIVSGAPKRGDHRCFVAARTQERTWEAGMFLDKGLRDRLGEDDVTSRLLLQAIANASGVPRHL----DLRLTDS---------------------------EAQRLQWS----TRSFSRD-EQLEQLLRREVPFVTFLPE---GLS-------------------------LEGKRRVILPGSFNPLHEGHLGMMDAACKLV 239          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A2R6WER6_MARPO (CTP_transf_like domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WER6_MARPO)

HSP 1 Score: 110 bits (276), Expect = 2.430e-23
Identity = 97/292 (33.22%), Postives = 132/292 (45.21%), Query Frame = 1
Query:   10 QAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEI 885
            QA+ WLL VP AS+ +LE TVPY   +    +  G     + SRE+AE +A  AY RA+ L            +P   V  +G T A+ S+ P+RG H+CYV A+T  GL    LTLSKG+RDR GED   SR+L++ +AD  GV +        L LD G                               V    V   +   D + +E LV G+          T  VS A  E             G + ++ + +   V+L GS+NPLH GHV LLE A S+ +  I
Sbjct:   29 QALGWLLSVPRASSTVLEVTVPYSRISMLQYL--GKAPLQFVSRESAEDIALAAYNRALRLS-----------MPGVPVAGIGFTGALASATPKRGDHRCYVAARTQTGLWECNLTLSKGKRDRIGEDEVTSRILIKTLADVCGVSLEL-----PLGLDDG-------------------------------VEKLNVSNKNFTED-EQLEHLVEGK----------TSMVSYAQSE-------------GGIFQSGVRK---VVLSGSFNPLHEGHVKLLEVACSMCERSI 244          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: C1N013_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N013_MICPC)

HSP 1 Score: 110 bits (275), Expect = 7.130e-23
Identity = 94/292 (32.19%), Postives = 133/292 (45.55%), Query Frame = 1
Query:   10 QAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADL-----AHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSL 870
            Q++ W+  VPGAS  LL+A VPY  +A  + +  G+    Y S   A  LA  AYAR V L    +     +    R V+ +GCT A+ S  P+RG H+C V    A G+  Y LT  KGRRDR GEDA  SR++++A+ DA          +          GD+      D       A+       + V++  + P AD+         D ++ LV+G  G  L +    RG   A              +  A  R  +P    +ILPGS+NPLH GH G+L AA  +
Sbjct:   29 QSLGWVAAVPGASRTLLDARVPYGREATIEALG-GTEPRRYVSSTTARDLAAAAYARGVRLSGLAAASAAANAT--RHVVGLGCTCALTSEIPKRGEHRCVVATHDARGVTEYSLTFEKGRRDRWGEDAVASRVVVRALLDAXXXXXXXXXXS----------GDVDRRSSID-------ASTTTISAPDEVLAPFLNPPADVFAKTRERIDDHVDWLVSG-AGDVLQLSMTARGDRRA--------------QLAATARGVVPENL-LILPGSFNPLHDGHRGMLAAAMKM 284          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A7S2V675_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V675_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.760e-22
Identity = 128/451 (28.38%), Postives = 188/451 (41.69%), Query Frame = 1
Query:   25 LLGVPGASACLLEATVPYCFKAFED--------RMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDR-------------GP--HVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTAD-GLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGR---GAAAAAAGEAETV-VSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASTDGGSAGLDVDAGGGDVGNEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEP-------------GGVGWPYPVAVTKAPLFSEK 1254
            ++G PG S+CLL+  V Y   A  D        R   GS    +CS E +  +AR A+  A  L V E  ++             GP   +     ++ +G TA ++S++P+RG H+C+V    A  GL  Y LTL KG RDR+ EDA V+RL + A+A+A GVPVP  F    L        D+     +     G    G+A++ AG+A  V +  E V  A        +E++++ R   AL+VP                G   +V    A  +  LPR  T+I+PGS+NPLH GHV L  AAR                             W +E +Q                     L++      + N       +    +FE++V N DKG L  +++  R+  F+ P             G +     VAVT   LFS+K
Sbjct:    1 MVGTPGCSSCLLDLKVLYARAAAVDFVDPDEMERPFVGS----FCSAEFSGKMARSAHLEAARLAVLEWQEQEMASEGLQMPLTLGPLLALAGQTHLVGLGITAGLVSTRPKRGDHRCHVSTYCAHRGLVTYSLTLDKGARDRAEEDAMVARLAVYALAEAAGVPVPKDFLRSSLT-------DI-EVEPQPIANVGMTPSGSASSDAGDAPPVGLGPEAVKRA--------VEDVLSNRSPLALLVPTT--------------GGEWLVYSGAAAGKLLLPR-PTLIVPGSFNPLHVGHVELALAARKA---------------------------WMKEQKQTY-------------------LEI------ISNGHPRASMSPPPIVFELAVQNPDKGSLDPDQVMERLENFASPASPTGEEVNPEVKGLLTEGLAVAVTSCSLFSQK 364          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A2P6TDW1_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TDW1_CHLSO)

HSP 1 Score: 106 bits (264), Expect = 7.170e-21
Identity = 87/288 (30.21%), Postives = 127/288 (44.10%), Query Frame = 1
Query:   10 QAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPVPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADLAHDPDAI-EELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSL 870
            QA++WLL VPGAS  +L+  +PY   + +D +  G     Y S E A  +AR AY +AV L    +            V+ +GCT A+ + + +RG H+ Y+ A +      + L LSKG R R GED  VS+L+++A+ADA+GVP     +   + L       ++S    D +K                           + D DAI ++++ GR  T                          V   G  +    PR   V LPGS+NPLH GH  +LEAA  L
Sbjct:  942 QAVAWLLSVPGASRTVLDMHIPYSRNSLKDIL--GKSPDSYASPETARDMARAAYQQAVKLSTFGTD-----------VVGIGCTCALATDREKRGEHKAYITAYSGAQERSFSLLLSKGARSRFGEDQLVSKLVIKAIADALGVPT----EVMEISL-------ISSGDHPDELK-----------------------VESSSKDIDAILKDMLNGRVDT--------------------------VEFSGGNIYVDAPRPGRVYLPGSFNPLHDGHKDMLEAALRL 1156          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A3D0UM25_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0UM25_9CHLR)

HSP 1 Score: 102 bits (253), Expect = 3.300e-20
Identity = 62/148 (41.89%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 AGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGV 444
            AG QA++WLLGV GAS  LLEA +PY   +F   +  G     Y S   A  +A +A  RA  LC             D  VI + CTA +++ +P+RG H+ +V + T +G+  Y L LSKG RDR GE+  VSRL+L A+A A G+
Sbjct:   39 AGTQALAWLLGVAGASRTLLEALIPYEETSFNAFL--GQAPKKYVSPNTARLMAGRAVTRAQQLCQG-----------DVEVIGLACTATIITDRPKRGEHRAHVASWTRNGVTCYSLHLSKGARDRYGEEEVVSRLMLNALAKAYGI 173          
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Match: A0A0G4EQI1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EQI1_VITBC)

HSP 1 Score: 101 bits (251), Expect = 1.280e-19
Identity = 96/309 (31.07%), Postives = 132/309 (42.72%), Query Frame = 1
Query:    4 GGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRA--PGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGAHQCYVCAQTADGLAH----YELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVP-VPFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEVVPTADLAHDPDAIEELVAGRC-------GTALVVPRDTRGVSNAAGEASEAGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEIN 888
            GG    WL   PGASA  LE  +PY   + E  +  G +     +   E A  L+R A   A+ + + ES   G   L DR ++ +G T A+ S++P+RG H+ YVCA +  G  H    Y   L KGRR R  ED  VSR+LL A+ D   V  VP G       LD  G    AS   E                       E+  ++D A DP  I++L+ G+        G+ LVVP                                L     ++LPGS+NPLH GH+G+ EAA +L    ++
Sbjct:   80 GGHFFKWLFSTPGASAVFLEGAMPYARHSTERLLQRGRQTVPSNFVDAEMARALSRSALQCAMEIKIRES---GIQALSDR-LVGIGSTCALASTQPKRGEHRVYVCATSLRGGRHSTREYAAILEKGRRSREEEDELVSRVLLNALLDQADVDRVPTG-------LDATG----ASPGNE-----------------------ELSESSDEAQDP--IQDLLDGKVTHVVLCGGSGLVVPSPP-----------------------------LSDCDILMLPGSFNPLHEGHIGMAEAAANLRGTSMS 319          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15886.4319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J5Q6_9PHAE7.960e-26794.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CF87_9STRA1.060e-3529.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DDP4_9STRA3.860e-3228.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Y1HLY0_KLENI1.070e-2433.68CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A2R6WER6_MARPO2.430e-2333.22CTP_transf_like domain-containing protein n=2 Tax=... [more]
C1N013_MICPC7.130e-2332.19Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S2V675_9STRA7.760e-2228.38Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2P6TDW1_CHLSO7.170e-2130.21Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A3D0UM25_9CHLR3.300e-2041.89CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A0G4EQI1_VITBC1.280e-1931.07Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15886contigEcto-sp13_S_contig15886:1299..3564 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score731.1
Seed ortholog evalue2.9e-208
Seed eggNOG ortholog2880.D8LCX0
Model size1254
Hectar predicted targeting categorysignal peptide
Exons3
EggNOG OGs28KTS@1,2QTA1@2759
Cds size1254
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462839.0434005-CDS-Ecto-sp13_S_contig15886:1298..14421681462839.0434005-CDS-Ecto-sp13_S_contig15886:1298..1442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15886 1299..1442 +
1681462839.0574715-CDS-Ecto-sp13_S_contig15886:1745..19811681462839.0574715-CDS-Ecto-sp13_S_contig15886:1745..1981Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15886 1746..1981 +
1681462839.073289-CDS-Ecto-sp13_S_contig15886:2690..35641681462839.073289-CDS-Ecto-sp13_S_contig15886:2690..3564Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15886 2691..3564 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15886.4319.1prot_Ecto-sp13_S_contig15886.4319.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15886 1299..3564 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15886.4319.1

>prot_Ecto-sp13_S_contig15886.4319.1 ID=prot_Ecto-sp13_S_contig15886.4319.1|Name=mRNA_Ecto-sp13_S_contig15886.4319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=418bp
AGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAA
EGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGA
HQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAVADAVGVPV
PFGFKADHLLLDGGGGGDLASAHEEDGVKAGRGAAAAAAGEAETVVSAEV
VPTADLAHDPDAIEELVAGRCGTALVVPRDTRGVSNAAGEASEAGAPVVV
LREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESR
RGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASTDGGSAGLDVDA
GGGDVGNEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGG
VGWPYPVAVTKAPLFSEK
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mRNA from alignment at Ecto-sp13_S_contig15886:1299..3564+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15886.4319.1 ID=mRNA_Ecto-sp13_S_contig15886.4319.1|Name=mRNA_Ecto-sp13_S_contig15886.4319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15886:1299..3564+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCGGGAGGGCAAGCGATATCTTGGTTGCTCGGAGTCCCCGGAGCGAGCGC GTGCCTCCTAGAGGCGACGGTTCCTTACTGCTTCAAGGCTTTCGAGGATA GGATGGCTGCAGGCTCGCGCGCCCCGGGATACTGTTCTCGAGAGGTGCGC AGTTGTTGGGAGATGGCTTCAATCCCCAGCTGTGTGTACATGAGGGAAGC TGCCCAATAGTCCACGAGTTGGTTAGTAGTGGTGCAAACCAGCAGCAGCA GAGCAGCAGTCCACCTGCATGTCTGCCCTGTCGGAGCAGACAACTGCTTG CGCTTACAGCAAACTGAGCGTGAATCGAGCACTGTCAGGGACAAGCCACC GATATCCATGCTTCAATGGGGGCCATCCAACACAAGCGTTGATTCGACCG ACTCTCATGCACTCTCCCCCCACGCCCCCCCGTGCAAACCGTCCAAGGCC GCGGAGGGGCTTGCGCGAAAAGCCTATGCCCGAGCCGTCTCCCTGTGCGT GGCGGAATCGCCCGACCGAGGGCCCCACGTGCTGCCGGACCGCCGCGTTA TCGCCGTGGGCTGCACGGCGGCGGTGTTGTCCTCCAAGCCCCGGCGGGGG GCGCACCAGTGCTACGTCTGCGCGCAGACCGCGGACGGGCTGGCGCACTA CGAGCTCACCCTGTCGAAGGGACGGAGAGACAGGTGGCACATGCACAGAA CGCGCCACCACTTAAAACCTCTTTGGTTTGGCTGAGGCTCGTTTCTTTTT TGTTCTTATGGGGTGGACTACCCCCACGGCGACTGTACAAGTTTTGGCGT GGGCTTCTCGACTGAACAACTCATCTTTTGACCAAGTTCTTCGACTTCGA GATTGTTGAGGCTCAAGTTCTCAGCTGCTACGTTGTTACGAGGTGCCGCA TTCTAAATGTTGTGAGTGTGGGGAGGGACGTGGACTTCGCGTGTGTCGTG GCGTTTTCTAGTGATAAAGAGTCTCCAGCTATACTATGTTGTGGTGCTGC TGCCTGGCCGTGCTCGTCCATGTCTTTGAGCTCTTCAGGGGGAAGGTTCC GCTCTGTGGGGGTCGCGAACGTACATGGGCGACCAGCCGCACCCTTTTTG ATCACGATGGTAATTGACCTGTACAGCTGCAGTACCGTTTTTTTGTGGTC GCTCGGCGGTACGCCACTGTGTCTCGGCCTGTTGTGTTTCACGCGCAAAG TCTGGACGGCTAAACAAGCAAGAGCAAAAGCCGTGCGCGTGGCTGACTTG AGCCTCCTCGGATATCAGACGTTCGCAGAAACCCACTCGTCCTTGCCTCC ACACGAAACACCAAGCTGTTAAGCCCATCTCCACCATACCCCCGTGTTTG GCTACTTGGCGTCCCGACTTTCTTCTGGCCGCCGCCCACCAGGTCCGGCG AGGACGCCGCCGTCAGCCGGCTTCTGCTCCAAGCGGTCGCGGACGCCGTG GGGGTGCCGGTGCCCTTCGGCTTCAAGGCCGACCACCTGTTGCTGGACGG CGGCGGTGGAGGTGACCTCGCGTCGGCGCACGAGGAGGACGGGGTGAAGG CGGGGCGGGGGGCAGCTGCGGCAGCGGCAGGGGAGGCGGAAACGGTGGTA TCGGCGGAGGTGGTGCCGACGGCGGACCTTGCCCACGACCCCGACGCCAT CGAGGAGCTCGTGGCCGGAAGGTGTGGAACGGCGTTGGTCGTGCCGAGAG ACACCCGCGGGGTTTCGAACGCCGCCGGCGAAGCCAGCGAAGCGGGGGCG CCGGTTGTCGTTCTGCGGGAAGGGGCGATGGTCAGGGCGGCACTTCCACG GGGGGCGACGGTGATTCTCCCGGGGTCCTACAACCCCCTCCACAGGGGTC ACGTGGGTCTCCTGGAGGCCGCGCGGTCGCTGCTAGACGCCGAGATCAAC GGGGAGTCGAGGAGAGGGGAGACGCCGCAGAAGCCACCGGCGGCGGACAA GGCTGCTGCCGGGTGGGGGAGGGAAGGAGAGCAAGGGGTTCAAACGGACG AGGGCATGGGGGCGGGGGCCGCAAGCACCGACGGCGGGAGCGCGGGCTTA GACGTCGACGCCGGCGGGGGCGATGTCGGGAATGAGGAACGGGAGAAGAA GCGCACGGCGGTGCACGGTATCTTCGAGATTTCGGTGTCGAACGTGGACA AGGGGGGGTTGGGCGTCGAGGAGATTCAGCGGCGAGTCATGCAGTTCAGC GAGCCTGGGGGTGTCGGCTGGCCGTACCCGGTGGCGGTGACGAAAGCGCC ACTCTTTTCCGAAAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15886:1299..3564+

>mRNA_Ecto-sp13_S_contig15886.4319.1 ID=mRNA_Ecto-sp13_S_contig15886.4319.1|Name=mRNA_Ecto-sp13_S_contig15886.4319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1254bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15886:1299..3564+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCGGGAGGGCAAGCGATATCTTGGTTGCTCGGAGTCCCCGGAGCGAGCGC
GTGCCTCCTAGAGGCGACGGTTCCTTACTGCTTCAAGGCTTTCGAGGATA
GGATGGCTGCAGGCTCGCGCGCCCCGGGATACTGTTCTCGAGAGGCCGCG
GAGGGGCTTGCGCGAAAAGCCTATGCCCGAGCCGTCTCCCTGTGCGTGGC
GGAATCGCCCGACCGAGGGCCCCACGTGCTGCCGGACCGCCGCGTTATCG
CCGTGGGCTGCACGGCGGCGGTGTTGTCCTCCAAGCCCCGGCGGGGGGCG
CACCAGTGCTACGTCTGCGCGCAGACCGCGGACGGGCTGGCGCACTACGA
GCTCACCCTGTCGAAGGGACGGAGAGACAGGTCCGGCGAGGACGCCGCCG
TCAGCCGGCTTCTGCTCCAAGCGGTCGCGGACGCCGTGGGGGTGCCGGTG
CCCTTCGGCTTCAAGGCCGACCACCTGTTGCTGGACGGCGGCGGTGGAGG
TGACCTCGCGTCGGCGCACGAGGAGGACGGGGTGAAGGCGGGGCGGGGGG
CAGCTGCGGCAGCGGCAGGGGAGGCGGAAACGGTGGTATCGGCGGAGGTG
GTGCCGACGGCGGACCTTGCCCACGACCCCGACGCCATCGAGGAGCTCGT
GGCCGGAAGGTGTGGAACGGCGTTGGTCGTGCCGAGAGACACCCGCGGGG
TTTCGAACGCCGCCGGCGAAGCCAGCGAAGCGGGGGCGCCGGTTGTCGTT
CTGCGGGAAGGGGCGATGGTCAGGGCGGCACTTCCACGGGGGGCGACGGT
GATTCTCCCGGGGTCCTACAACCCCCTCCACAGGGGTCACGTGGGTCTCC
TGGAGGCCGCGCGGTCGCTGCTAGACGCCGAGATCAACGGGGAGTCGAGG
AGAGGGGAGACGCCGCAGAAGCCACCGGCGGCGGACAAGGCTGCTGCCGG
GTGGGGGAGGGAAGGAGAGCAAGGGGTTCAAACGGACGAGGGCATGGGGG
CGGGGGCCGCAAGCACCGACGGCGGGAGCGCGGGCTTAGACGTCGACGCC
GGCGGGGGCGATGTCGGGAATGAGGAACGGGAGAAGAAGCGCACGGCGGT
GCACGGTATCTTCGAGATTTCGGTGTCGAACGTGGACAAGGGGGGGTTGG
GCGTCGAGGAGATTCAGCGGCGAGTCATGCAGTTCAGCGAGCCTGGGGGT
GTCGGCTGGCCGTACCCGGTGGCGGTGACGAAAGCGCCACTCTTTTCCGA
AAAG
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