prot_Ecto-sp13_S_contig1587.4312.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1587.4312.1
Unique Nameprot_Ecto-sp13_S_contig1587.4312.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length377
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1587.4312.1 vs. uniprot
Match: A0A6H5KA42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA42_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 7.800e-98
Identity = 241/307 (78.50%), Postives = 245/307 (79.80%), Query Frame = 0 
Query:   79 MQMDDGWHPSG--------AIMVGPLTPSMPDHHRPGEQPMWDGPPGDDFGLPHHGMMMGGDVRRGGHFSRDFDDAEPPPGFIPFDLRAMDGGDGEPGYXXXXXXXXXXXXXXXXXXXAGDFHDDDDPHAFHXXXXXXXXXXXXSGGTAAFHDGDSTGTLRLNTPEFLTVPAGPDGRFTKKQRKLQRRHMKQLXXXXXXXXXXXXXXHTQEMDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHDQQEPFIPSIHGTRGQRRENFGPAAAPATTGFITGRRVNDDGGGAGFLGDDAFGPLSS 377
            MQMDDGWHPSG        AIMVGPLTPSMPDHHRPGEQPMWDGPP DDFGLPHHGM+MGGDVRR G F RDFDD EPPPGFIPFDLRAMDGGDGEPGYXXXXXXXXXXXXXXXXXXXAG FHDD       XXXXXXXXXXXX   TAAFHDGDSTGTLRLNTPEF TVPAGPDGRFTKKQRKLQRRH+KQL XXXXXXXXXXXXX       XXXX            XXXXXXXXXXXX           PFIPSIHGTRGQR ENFGPAAA ATTGF+TGRR ND+G GAG  GDDAFGPLSS
Sbjct:    1 MQMDDGWHPSGXXXXXXXXAIMVGPLTPSMPDHHRPGEQPMWDGPPADDFGLPHHGMIMGGDVRRVGDFGRDFDDTEPPPGFIPFDLRAMDGGDGEPGYXXXXXXXXXXXXXXXXXXXAGGFHDDXXXXXXXXXXXXXXXXXXXXXXTAAFHDGDSTGTLRLNTPEFFTVPAGPDGRFTKKQRKLQRRHVKQLQXXXXXXXXXXXXXXXXXXXXXXXXQQFQQPPLDHPQXXXXXXXXXXXX-----------PFIPSIHGTRGQRHENFGPAAAAATTGFLTGRRANDNGAGAGLHGDDAFGPLSS 296
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1587.4312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KA42_9PHAE7.800e-9878.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1587contigEcto-sp13_S_contig1587:15302..16432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1587.4312.1mRNA_Ecto-sp13_S_contig1587.4312.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1587 15302..16433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1587.4312.1 ID=prot_Ecto-sp13_S_contig1587.4312.1|Name=mRNA_Ecto-sp13_S_contig1587.4312.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=377bp
YPKAIVLPPHHRTLSPRPCSWAPCARRMPPKAKTKPKKRKPPRPARQQHR
PGPPHGDFDGAGLPPPPFHRRRQQQQRGMQMDDGWHPSGAIMVGPLTPSM
PDHHRPGEQPMWDGPPGDDFGLPHHGMMMGGDVRRGGHFSRDFDDAEPPP
GFIPFDLRAMDGGDGEPGYGEPDYSEQGYGEQGYGEPGAGDFHDDDDPHA
FHQQQHHPNYRPPPSGGTAAFHDGDSTGTLRLNTPEFLTVPAGPDGRFTK
KQRKLQRRHMKQLQLQQRQLQRHQHQHHTQEMDHHHQKQQQHFQQPPWDH
PQQQQQQHHHHHHHHHNEHDQQEPFIPSIHGTRGQRRENFGPAAAPATTG
FITGRRVNDDGGGAGFLGDDAFGPLSS
back to top