mRNA_Ecto-sp13_S_contig15853.4305.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 6.190e-182 Identity = 286/318 (89.94%), Postives = 291/318 (91.51%), Query Frame = 1
Query: 1 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRHNSTSGSFNAGGQGGNGGRNGSLDAVHRALAQANGDADDLYNYSGRGXXXXXXXXSVRSHHSSRAASLTSSRNGDVVAPIGGGGSVAVIGKHETAWGWGHNTAAAAAATEQQLHASRSKANLFGGDPSKQQPGSSAEAVTPSMGREGSGYRFHVVGGGSGGNGGG--RPGLHEVVGVPVRERPLTPDLGKPRPRHPGRQQXXXXXXV*AGAGSARHKVEDP 948
APVHMFCG+WG+IGTGLFTTREGWALTYGAAGGDRADECCG+FYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRHNSTSGSFNAGGQGGNGGRNGSLDAVHRALAQANGD DDLYNYSGR XXXXXXXXSVRSHHSSRAASLTSSRNGDVVAPIGGGGSVAVIGKHETAWGWGHNTA E+QLHASRSKANLFGGDPSKQQPGSSAEAVTPSMGREGSGY FHV+GG RPG HEVVGVPVRERPLTPDLGKPRPRHPGRQQ V AGAGSARHKVEDP
Sbjct: 312 APVHMFCGIWGLIGTGLFTTREGWALTYGAAGGDRADECCGLFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRHNSTSGSFNAGGQGGNGGRNGSLDAVHRALAQANGDGDDLYNYSGR-XXXXXXXXSVRSHHSSRAASLTSSRNGDVVAPIGGGGSVAVIGKHETAWGWGHNTAXXXXXAERQLHASRSKANLFGGDPSKQQPGSSAEAVTPSMGREGSGYSFHVMGGXXXXXXXXXXRPGQHEVVGVPVRERPLTPDLGKPRPRHPGRQQQQQQ--VWAGAGSARHKVEDP 626
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE) HSP 1 Score: 497 bits (1279), Expect = 2.370e-170 Identity = 268/298 (89.93%), Postives = 272/298 (91.28%), Query Frame = 1
Query: 1 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRHNSTSGSFNAGGQGGNGGRNGSLDAVHRALAQANGDADDLYNYSGRGXXXXXXXX---SVRSHHSSRAASLTSSRNGDVVAPIGGGGSVAVIGKHETAWGWGHNTAAAAAATEQQLHASRSKANLFGGDPSKQQPGSSAEAVTPSMGREGSGYRFHVVGGGSGGNGGGRPGLHEVVGVPVRERPLTPDLGKPRPRHPGRQQ 885
APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVP DQE+LGMDLTRHNSTSGSFNAGGQGGNGGRNGSLDAVHRALAQ +G XXXXXXXX S+RSHHSSRAASLTSSRNG+VVAPI GGGSVAVIGKHETAWGWGHNTAA EQQLHASR KA LFGGDPSKQQPGSSAEAVTPSMGREGSGYRFHVVGGGSGGNGGGRPGLHEVVGVPVRERPL PDLGKPRPRHPGRQQ
Sbjct: 363 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPEDQELLGMDLTRHNSTSGSFNAGGQGGNGGRNGSLDAVHRALAQVDGXXXXXXXXXXXXXXXXXXXXXHGSMRSHHSSRAASLTSSRNGEVVAPITGGGSVAVIGKHETAWGWGHNTAAXXXXAEQQLHASRPKAKLFGGDPSKQQPGSSAEAVTPSMGREGSGYRFHVVGGGSGGNGGGRPGLHEVVGVPVRERPLMPDLGKPRPRHPGRQQ 660
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: A0A7S2V0D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D8_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.080e-23 Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 4 PVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRH 294
PVHMFCGMWG+I GLF + E +A Y GDRA +CCG FYGCG ANL + A++AWV TS++LFF I+ TVG+RV + E GMD ++H
Sbjct: 92 PVHMFCGMWGVIAAGLFASEENYASAYY---GDRAADCCGAFYGCGGAAFGANLGFVFAVIAWVIGTSLLLFFGIKFTVGIRVSIEVEEAGMDSSKH 185
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI) HSP 1 Score: 107 bits (267), Expect = 1.430e-22 Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 7 VHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRHNSTSG 309
VH CG+WGM+ TGLFTTR G+A Y DRADECCGVFYGC +LL AN+ + A +AWVG T+V+LF I+ ++GLRV E GMD TRH G
Sbjct: 312 VHGLCGLWGMVATGLFTTRLGYARAYAE---DRADECCGVFYGCSGSLLAANMIFVLAQVAWVGGTAVVLFLGIKYSLGLRVNTITEEEGMDKTRHGGYHG 409
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.370e-19 Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 1 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRH 294
APVH+FCGMWGM GL + Y DRAD CCG FYGCG N L A + + LAW G+TS I+F + TVGLRV + E +GMD ++H
Sbjct: 368 APVHLFCGMWGMFAVGLLAEEHNYGRAYYE---DRADICCGAFYGCGGNQLAAQIVFILVNLAWTGVTSAIMFTVAKYTVGLRVSKEVEEMGMDSSKH 462
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 6.220e-18 Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 1 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRH 294
APVH+F GMWG++ GLF+++ +A+ Y DR+D C G+ YG L AN+ L A+LAWVGL +++LF + T+G+RV QE+ GMD ++H
Sbjct: 343 APVHLFGGMWGLVSAGLFSSKFAYAMAYSE---DRSDTCAGILYGGSGGTLAANIVFLMAVLAWVGLLTLLLFVVTKLTIGIRVSKQQELAGMDDSKH 437
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: A0A7S4DGA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA7_HETAK) HSP 1 Score: 92.8 bits (229), Expect = 1.370e-17 Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 1 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRHNSTS 306
APVH+FCG WG + GLF + +++ + + DRAD+CCG FYGCG AN L I+ + + SVI++ T G RVP DQE GMD ++H S
Sbjct: 270 APVHLFCGSWGFLAAGLFAAEDNYSVAFYS---DRADKCCGAFYGCGGKQFGANFIFLLVIIGFTSVCSVIMYTFARYTTGFRVPPDQEDAGMDQSKHGGIS 368
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 8.010e-17 Identity = 45/98 (45.92%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 1 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRH 294
APVH+FCGMWGM GL + Y DR+ CCG FYGCG + L A + + LAW G+TS ++F + TVGLRV + E LGMD ++H
Sbjct: 363 APVHLFCGMWGMFAVGLLAEPNNYGRVYYE---DRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKH 457
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: D7FGY6_ECTSI (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY6_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.320e-16 Identity = 38/97 (39.18%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 4 PVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRH 294
PVH+F GMWG++ G F ++ G+A Y DR+ C G+ YG + L A++ L A++AWVG +++LF + T+G+R+ +QE+ GMD+++H
Sbjct: 85 PVHLFGGMWGLVAAGFFASKFGYAAAYSE---DRSGTCAGILYGGNGSSLGASIVFLMAVVAWVGFLTLLLFVVTKLTIGIRISKEQEMAGMDVSKH 178
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Match: A0A7S1UFZ4_9STRA (Ammonium transporter n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFZ4_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.970e-16 Identity = 42/98 (42.86%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 APVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRH 294
APVHMFCGMWG+I GLF T + ++ Y + DRA++C G+FYG + L AN+ + I+ WVG T+ ++F +++A LR+ +Q+ GMD+ H
Sbjct: 365 APVHMFCGMWGVIAAGLFATEQNYSNAYYS---DRAEDCAGIFYGGNGSTLGANICFMICIILWVGATTSVMFGSLKAAGLLRLTDEQQATGMDILEH 459 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15853.4305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15853.4305.1 >prot_Ecto-sp13_S_contig15853.4305.1 ID=prot_Ecto-sp13_S_contig15853.4305.1|Name=mRNA_Ecto-sp13_S_contig15853.4305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=299bp MFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANback to top mRNA from alignment at Ecto-sp13_S_contig15853:2102..3557- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15853.4305.1 ID=mRNA_Ecto-sp13_S_contig15853.4305.1|Name=mRNA_Ecto-sp13_S_contig15853.4305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15853:2102..3557- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15853:2102..3557- >mRNA_Ecto-sp13_S_contig15853.4305.1 ID=mRNA_Ecto-sp13_S_contig15853.4305.1|Name=mRNA_Ecto-sp13_S_contig15853.4305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=897bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15853:2102..3557- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |