mRNA_Ecto-sp13_S_contig1583.4294.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1583.4294.1
Unique NamemRNA_Ecto-sp13_S_contig1583.4294.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: D8LI70_ECTSI (Nuclear cap-binding protein subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI70_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 1.440e-122
Identity = 193/198 (97.47%), Postives = 193/198 (97.47%), Query Frame = 1 
Query:    4 MTEMLDFGWSERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATNDPARGGMGGLALAEMNGQLAPQGGGGXXDYYGHXXXXXXXXXXXXRRANKRPRVDWDARDRR 597
            MTEMLDFGWSERPYWDRKNWSSLEAYKEALK SSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATNDPARGGMGGLALAEMNGQLAPQGGGG  DYYGHXXXXXXXXXXX  RANKRPRVDWDARDRR
Sbjct:    1 MTEMLDFGWSERPYWDRKNWSSLEAYKEALKKSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATNDPARGGMGGLALAEMNGQLAPQGGGGGGDYYGHXXXXXXXXXXX--RANKRPRVDWDARDRR 196
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: F0WMQ1_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMQ1_9STRA)

HSP 1 Score: 169 bits (429), Expect = 5.360e-47
Identity = 81/137 (59.12%), Postives = 103/137 (75.18%), Query Frame = 1 
Query:   31 SERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATN--DPARGGMG 435
            ++R YWDRK + SLE  + A+K SSTLY+GNLSFYT E+Q+  LF +VG ++RVIMGLDR KK+PCGFCFVEY +H++ L     L GT LD R+I+  +D GF QGRQ+GRG SGGQVRD+ R+ +  DP RGG G
Sbjct:   19 NQRKYWDRKTYKSLEEQQSAIKQSSTLYIGNLSFYTSENQLCELFSRVGTIKRVIMGLDRFKKTPCGFCFVEYYSHAEALACSNFLSGTKLDNRVIRCEMDGGFTQGRQFGRGFSGGQVRDDRRSKDEYDPGRGGFG 155
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: A0A024GN20_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GN20_9STRA)

HSP 1 Score: 169 bits (427), Expect = 9.740e-47
Identity = 81/136 (59.56%), Postives = 102/136 (75.00%), Query Frame = 1 
Query:   34 ERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATN--DPARGGMG 435
            +R YWDRK + SLE  + A+K SSTLY+GNLSFYT E+Q+  LF +VG ++RVIMGLDR KK+PCGFCFVEY +H++ L     L GT LD R+I+  +D GF QGRQ+GRG SGGQVRD+ R+ +  DP RGG G
Sbjct:   20 QRKYWDRKTYKSLEEQQSAIKQSSTLYIGNLSFYTSENQLCELFSRVGTIKRVIMGLDRFKKTPCGFCFVEYYSHAEALACSNFLTGTKLDNRVIRCEMDGGFTQGRQFGRGFSGGQVRDDRRSKDEYDPGRGGFG 155
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: A0A067BW87_SAPPC (Nuclear cap-binding protein subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BW87_SAPPC)

HSP 1 Score: 164 bits (416), Expect = 2.940e-45
Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 1 
Query:   25 GWSERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATND--PARGGMG 435
            G  ++ YWDR+ ++SLE  +EA+K SSTLYVGNLSF+T E+QIY LF  VG VR VIMGLDR+KK+PCGFCFVEY N          + GT LD+R+I+  +D GF++GRQYGRG +GGQVRD+ R+ +D  P RGG G
Sbjct:   12 GPKKKEYWDRQTYTSLEEQQEAMKQSSTLYVGNLSFFTSETQIYELFSVVGPVRAVIMGLDRLKKTPCGFCFVEYFNKEHAQACSNFVSGTKLDQRVIRCELDGGFREGRQYGRGTTGGQVRDDRRSKDDYDPGRGGYG 150
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: A0A1W0A133_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A133_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.220e-45
Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 1 
Query:   25 GWSERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATND--PARGGMG 435
            G  ++ YWDR+ ++SLE  +EA+K SSTLYVGNLSF+T E+QIY LF  VG VR VIMGLDR+KK+PCGFCFVEY N          +  T LD+R+I+  +D GF++GRQYGRG +GGQVRD+ R+ +D  P RGG G
Sbjct:   12 GPKKKEYWDRQTYASLEEQQEAMKQSSTLYVGNLSFFTSETQIYELFSVVGPVRAVIMGLDRIKKTPCGFCFVEYFNKDHAQACANFISSTKLDQRVIRCELDGGFREGRQYGRGTTGGQVRDDRRSKDDYDPGRGGYG 150
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: A0A8K1CR96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR96_PYTOL)

HSP 1 Score: 162 bits (410), Expect = 1.970e-44
Identity = 79/144 (54.86%), Postives = 103/144 (71.53%), Query Frame = 1 
Query:   10 EMLDFGWSERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATND--PARGGMG 435
            E +  G  +R YWDRK ++S E  + A+  S+TLY+GNLSF+T E QIY LF +VG V+RVIMGLDR KK+PCGFCFVEY  H + +     ++ T LD R+I+  +D GFK+GRQ+GRG SGGQVRD+ R+ +D  P RGG G
Sbjct:   13 ERVARGQQQRKYWDRKTYTSYEEQQRAIASSATLYIGNLSFFTSEVQIYELFSRVGNVKRVIMGLDRFKKTPCGFCFVEYNTHEEAVACANFVNETKLDNRVIRCEMDGGFKEGRQFGRGASGGQVRDDRRSRDDYDPGRGGYG 156
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: A0A225UYF8_9STRA (Nuclear cap-binding protein subunit 2 n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A225UYF8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.190e-44
Identity = 81/144 (56.25%), Postives = 104/144 (72.22%), Query Frame = 1 
Query:   10 EMLDFGWSERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATND--PARGGMG 435
            + L  G S+R YWDRK +SS    + A+  SSTLYVGNLSF+T E+QIY LF +VG V+RVIMGLDR KK+PCGFCFVEY+ HS+       L  T LD R+++  +D GF++GRQ+GRG+SGGQVRD+ R+ +D    RGG G
Sbjct:   13 QRLARGPSQRQYWDRKTFSSFAEQQRAMTRSSTLYVGNLSFFTSEAQIYELFSRVGHVKRVIMGLDRFKKTPCGFCFVEYSTHSEAEACAQFLSETKLDNRVVRCEMDGGFREGRQFGRGLSGGQVRDDRRSKDDYDAGRGGYG 156
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: B6JXD6_SCHJY (Nuclear cap-binding protein subunit 2 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6JXD6_SCHJY)

HSP 1 Score: 160 bits (405), Expect = 2.450e-44
Identity = 79/132 (59.85%), Postives = 96/132 (72.73%), Query Frame = 1 
Query:   40 PYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATNDPARGGMG 435
            PY  R  WS+  A  E +K S  +YVGNLSFYT E QIYALF + G ++R+IMG+DR  K+PCGFCFVEY  H D L ++  + GTALDERII+  +DPG+++GRQYGRG SGGQVRDE R   DP RGG G
Sbjct:   12 PYILRNGWSN-PAILEKVKESCCVYVGNLSFYTTEDQIYALFSKCGEIKRIIMGIDRFTKTPCGFCFVEYYTHEDALDSLKYVSGTALDERIIRADLDPGYEEGRQYGRGASGGQVRDEIREEFDPGRGGYG 142
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: K3W5Q9_GLOUD (Nuclear cap-binding protein subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5Q9_GLOUD)

HSP 1 Score: 161 bits (408), Expect = 4.500e-44
Identity = 78/144 (54.17%), Postives = 105/144 (72.92%), Query Frame = 1 
Query:   34 ERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATN--DPARGGMGGLALAEMN 459
            +R YWDRK +SS +  + A+  S+TLY+GNLSF+T E QIY LF +VG V+RVIMGLDR KK+PCGFCFVE++ H + +     +  T LD R+I+  +D GFK+GRQ+GRG+SGGQVRD+ R+ +  DP RGG G   +A+ N
Sbjct:   20 QRNYWDRKTFSSYDEQQRAMARSTTLYIGNLSFFTTEVQIYELFSRVGNVKRVIMGLDRFKKTPCGFCFVEFSTHDEAIACSNFISETKLDNRVIRCEMDGGFKEGRQFGRGLSGGQVRDDRRSKDEYDPGRGGYGRSDVADGN 163
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BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Match: W2Q5Q2_PHYPN (Nuclear cap-binding protein subunit 2 n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q5Q2_PHYPN)

HSP 1 Score: 161 bits (408), Expect = 5.340e-44
Identity = 80/144 (55.56%), Postives = 105/144 (72.92%), Query Frame = 1 
Query:   10 EMLDFGWSERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATND--PARGGMG 435
            + L  G S+R YWDRK +SS    + A++ SSTLYVGNLSF+T E+QIY LF +VG V+RVIMGLDR KK+PCGFCFVEY+ H++       L  T LD R+++  +D GF++GRQ+GRG+SGGQVRD+ R+ +D    RGG G
Sbjct:   13 QRLARGPSQRQYWDRKTFSSFAEQQRAMERSSTLYVGNLSFFTSEAQIYELFSRVGHVKRVIMGLDRFKKTPCGFCFVEYSTHAEAEACAQFLSETKLDNRVVRCEMDGGFREGRQFGRGLSGGQVRDDRRSKDDYDAGRGGYG 156
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1583.4294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI70_ECTSI1.440e-12297.47Nuclear cap-binding protein subunit 2 n=2 Tax=Ecto... [more]
F0WMQ1_9STRA5.360e-4759.12Nuclear cap-binding protein subunit 2 n=1 Tax=Albu... [more]
A0A024GN20_9STRA9.740e-4759.56Nuclear cap-binding protein subunit 2 n=1 Tax=Albu... [more]
A0A067BW87_SAPPC2.940e-4558.27Nuclear cap-binding protein subunit 2 n=2 Tax=Sapr... [more]
A0A1W0A133_9STRA4.220e-4557.55Nuclear cap-binding protein subunit 2 n=1 Tax=Thra... [more]
A0A8K1CR96_PYTOL1.970e-4454.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225UYF8_9STRA2.190e-4456.25Nuclear cap-binding protein subunit 2 n=2 Tax=Pero... [more]
B6JXD6_SCHJY2.450e-4459.85Nuclear cap-binding protein subunit 2 n=1 Tax=Schi... [more]
K3W5Q9_GLOUD4.500e-4454.17Nuclear cap-binding protein subunit 2 n=1 Tax=Glob... [more]
W2Q5Q2_PHYPN5.340e-4455.56Nuclear cap-binding protein subunit 2 n=8 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1583contigEcto-sp13_S_contig1583:963..3559 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score362.8
Seed ortholog evalue9.9e-98
Seed eggNOG ortholog2880.D8LI70
Preferred nameNCBP2
Model size1122
KEGG koko:K12883
KEGG Pathwayko03013,ko03015,ko03040,map03013,map03015,map03040
KEGG ModuleM00399
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000339,GO:0000340,GO:0000375,GO:0000377,GO:0000394,GO:0000398,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005681,GO:0005737,GO:0005829,GO:0005845,GO:0005846,GO:0006139,GO:0006351,GO:0006353,GO:0006354,GO:0006366,GO:0006368,GO:0006369,GO:0006370,GO:0006379,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006408,GO:0006417,GO:0006446,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008104,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009889,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0012505,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016071,GO:0016073,GO:0016246,GO:0016441,GO:0016458,GO:0017069,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0023052,GO:0030422,GO:0031047,GO:0031050,GO:0031053,GO:0031123,GO:0031124,GO:0031323,GO:0031325,GO:0031326,GO:0031440,GO:0031442,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032239,GO:0032241,GO:0032268,GO:0032386,GO:0032388,GO:0032774,GO:0032879,GO:0032991,GO:0033036,GO:0034248,GO:0034399,GO:0034470,GO:0034518,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035194,GO:0035195,GO:0035196,GO:0036260,GO:0040029,GO:0042221,GO:0042795,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043331,GO:0043900,GO:0043901,GO:0043903,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045069,GO:0045071,GO:0045184,GO:0045292,GO:0045935,GO:0046483,GO:0046700,GO:0046822,GO:0046824,GO:0046831,GO:0046833,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048525,GO:0050657,GO:0050658,GO:0050684,GO:0050685,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051028,GO:0051030,GO:0051049,GO:0051050,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070727,GO:0070848,GO:0070887,GO:0070918,GO:0071166,GO:0071310,GO:0071359,GO:0071363,GO:0071407,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097064,GO:0097159,GO:0097659,GO:0098781,GO:0098787,GO:0098789,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901698,GO:1901699,GO:1903311,GO:1903313,GO:1903900,GO:1903901,GO:1990904,GO:2000112
Exons4
EggNOG free text desc.RNA cap binding
EggNOG OGsKOG0121@1,KOG0121@2759
Ec32 ortholog descriptionnuclear cap-binding protein subunit 2
Ec32 orthologEc-14_003380.1
Cds size597
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1583.4294.1prot_Ecto-sp13_S_contig1583.4294.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1583 1485..3556 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462836.9788373-UTR-Ecto-sp13_S_contig1583:962..14841681462836.9788373-UTR-Ecto-sp13_S_contig1583:962..1484Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1583 963..1484 -
1681462837.038936-UTR-Ecto-sp13_S_contig1583:3556..35591681462837.038936-UTR-Ecto-sp13_S_contig1583:3556..3559Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1583 3557..3559 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462836.9926167-CDS-Ecto-sp13_S_contig1583:1484..17001681462836.9926167-CDS-Ecto-sp13_S_contig1583:1484..1700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1583 1485..1700 -
1681462837.0048525-CDS-Ecto-sp13_S_contig1583:2140..22791681462837.0048525-CDS-Ecto-sp13_S_contig1583:2140..2279Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1583 2141..2279 -
1681462837.0204093-CDS-Ecto-sp13_S_contig1583:2771..28451681462837.0204093-CDS-Ecto-sp13_S_contig1583:2771..2845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1583 2772..2845 -
1681462837.0302532-CDS-Ecto-sp13_S_contig1583:3388..35561681462837.0302532-CDS-Ecto-sp13_S_contig1583:3388..3556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1583 3389..3556 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1583.4294.1

>prot_Ecto-sp13_S_contig1583.4294.1 ID=prot_Ecto-sp13_S_contig1583.4294.1|Name=mRNA_Ecto-sp13_S_contig1583.4294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
MTEMLDFGWSERPYWDRKNWSSLEAYKEALKMSSTLYVGNLSFYTQESQI
YALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTAL
DERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATNDPARGGMGGLALAE
MNGQLAPQGGGGGGDYYGHGGGGGGDYYGGGRRANKRPRVDWDARDRR*
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mRNA from alignment at Ecto-sp13_S_contig1583:963..3559-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1583.4294.1 ID=mRNA_Ecto-sp13_S_contig1583.4294.1|Name=mRNA_Ecto-sp13_S_contig1583.4294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1583:963..3559- (Ectocarpus species13 EcNAP12_S_4_19m)
ACCATGACCGAGATGCTTGACTTCGGGTGGTCCGAGCGCCCCTACTGGGA
CCGCAAGAACTGGTCCTCGCTGGAGGCTTACAAGGAGGCTCTGAAGATGT
CCAGCACGCTTTACGTCGGGAACCTGTCCTTCTATACGCAGGAGTCTCAA
ATCTACGCGCTGTTCGATCAGGTGAGATTGAGGGCTTGATTGTCTCGGCA
GCAGGGGTGCATCCCCCGTTCTCTACTACATATGGACTATGCATACAAGC
TTGCATGGTTACTGAGAGGCGTATGTCCAGCGCAACGCATCTTTTTACCT
AATTAGTAGACACAGAGGCCTGTGAGTCTAAGCAGTTGAAAAGCGCACAG
GCCTCGACGCCCACGCGAAATAAACGGAAGAGCCGGCTGCAGACGAGACC
ACAAAAGTATACAACCAGGACGATACATATGCATTCCAATCTCTGATCCA
CCGCCGTCGGTATCTTGACGTGACGTGTTGATCCAAGACACGAAGACTTG
GTCTTGTTTCGGTTGCTCACCCAGAGTAACGACAGCAGTCGTGCTTGAGC
TTAATGACCCTGCGAGAGCAGCAGCGCATCGAAGACATACTCCACGTCGG
CTGCCTTGGTGGAAGTATCACATGTCACACAGCTAAATAATTCCTTCACC
TGTCTCAGAGCTAATTATTTCTTTGCTTGAGACAGCAAATTTCTTTGCTC
GCCGCTTTCGACAGGTTGGAGCGGTTCGGAGAGTGATCATGGGTCTCGAC
CGCGTGAAGAAGTCCCCGTGCGGTTTCTGCTTCGTCGAGTGAGTCTTGTA
TGTGCAGATTTGTAAACAACTACTGTGCGAGAGGGGCCCGGAAACAGAAA
TCCCACCGTGTTTCTTGTTAGACGGTATGGAAGGATAAACATGGTCAGGT
TGCACTCTGTTTTTCGTAGAACCACCGCTCCGTAGAACCATCGCTCTCGT
CTTGGACGTCCTCAACAACCATACCGGTCAGGCCGGTTGGGGTAATGGGG
GTTGTCTTGCTTCTCTGTATGTACTACCTCATGTGGTTGCCTTTTTTGCT
ACAGAATCTGTTCGAAAGATCGGTGGATCCTCCTAGCTTCAACGAAACAG
GCTACCATTTTGTGCCCGATGGGTTCCGTCACATGCCCGCGAGGGGGAAG
GAACAGCCGGTTACTCTGACACAGATAAAGCGTTTGGTATCCCCCTCCCC
CCCCCAAATCCTCGTGACGCCTTACCCACCGGTATCCGCTGTATCCACTC
GTACCCCGATTCGCTGCTCGCTGCTTCAAGGTACACGAACCATTCCGACA
CCCTAATGGCGATTACCTGCCTGGACGGTACGGCGCTCGACGAGCGTATC
ATCAAAGTGGGAATCGACCCAGGGTTTAAGCAGGGCCGGCAGTATGGGCG
CGGCATGTCGGGAGGGCAGGTGAGTGACAACCCCCTCGAAGCGTTGGTCA
AATTGATCGAGTATTTCCGCCCGGAATGATGGCGAGGGTCCTGTTGTGTG
GTTGAATGTTGGAAGAGTCAACTGTGCGGCTTCTTGTTCCAGCTGGATAA
CACCACCAAAGTTTCGCTGGATTCACTGCGGTAGGACTACAAAGTAGGCC
ACATTCGCTGCACTGTGCCGACCATGTCATGACTGCTGTGTCAAGAGAGC
CAGATAAAAATCAAATCTGGAGAAATGCTTCCAGTTATTTTAGGCAAGCC
ACCTATCCCATCGGCTTCCATTCATAGATTTGCATCGCAGGCCCTCGGCT
GTTTTACTAATGGGTGAGTGTTCGCACATGGCCGCCCATGCCGGTGACAA
CGCAGACACCCGTATCCCCCCCTCCATATCCCAAATCAAATGGAAAAACC
CCGGAGTAGGTGAGAGATGAAGCGCGCGCCACGAACGACCCAGCACGAGG
AGGCATGGGCGGCCTAGCCCTCGCCGAGATGAACGGGCAGCTTGCACCTC
AGGGAGGAGGAGGAGGAGGTGATTACTACGGCCATGGCGGGGGCGGCGGT
GGAGACTACTATGGCGGCGGCCGGCGCGCGAATAAGCGGCCACGCGTGGA
CTGGGATGCGCGGGATCGGCGGTGAAGGGCCGTCCCACCAGCAGCACCTT
CCTTCATTGTAGAGATTAGTTCACTGTTAGTTTTCTGGTTGGTTTTTTGG
TCTAGGTCATGTAGCGATTCTGTTTTTTGCGGCGGAGGGCACTCGCTTGT
TGTTGACCGCGCCAAGCTTTTGCGATTTGCTCACGGTTCAACAGGTTAGG
TTATAACTTCCTTTTCAGGAGGGTGGCACCTCGTGTCGTTCAACTCCGAG
TTGAATCGTGGGTGGAAAGTTGTTTGGAACTAAGTACACTGCTGTAGTGC
CGCGTCGCCAAATGTATCTCGTTTGAAGTTTTTAACGTGACGTCGGTCGT
GATTAGTCGTGTGCGCTCGGTCCACGCAATAGGAGGCCGAAGGTGGTTCG
GTTGGTACCTCGCAACCTTCTGATGTTTGGGGCGTGGGTTAGAATCTTGG
CGCGGTCACGGGAACTGGGAGTTTTCGTTTTTCTCCCAATAAATTGGTTA
TGTCGCTACTTCGTTTGTACATACGCGACAAGTGGGTATCACGGCCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1583:963..3559-

>mRNA_Ecto-sp13_S_contig1583.4294.1 ID=mRNA_Ecto-sp13_S_contig1583.4294.1|Name=mRNA_Ecto-sp13_S_contig1583.4294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1583:963..3559- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCGAGATGCTTGACTTCGGGTGGTCCGAGCGCCCCTACTGGGACCG
CAAGAACTGGTCCTCGCTGGAGGCTTACAAGGAGGCTCTGAAGATGTCCA
GCACGCTTTACGTCGGGAACCTGTCCTTCTATACGCAGGAGTCTCAAATC
TACGCGCTGTTCGATCAGGTTGGAGCGGTTCGGAGAGTGATCATGGGTCT
CGACCGCGTGAAGAAGTCCCCGTGCGGTTTCTGCTTCGTCGAGTACACGA
ACCATTCCGACACCCTAATGGCGATTACCTGCCTGGACGGTACGGCGCTC
GACGAGCGTATCATCAAAGTGGGAATCGACCCAGGGTTTAAGCAGGGCCG
GCAGTATGGGCGCGGCATGTCGGGAGGGCAGGTGAGAGATGAAGCGCGCG
CCACGAACGACCCAGCACGAGGAGGCATGGGCGGCCTAGCCCTCGCCGAG
ATGAACGGGCAGCTTGCACCTCAGGGAGGAGGAGGAGGAGGTGATTACTA
CGGCCATGGCGGGGGCGGCGGTGGAGACTACTATGGCGGCGGCCGGCGCG
CGAATAAGCGGCCACGCGTGGACTGGGATGCGCGGGATCGGCGGTGA
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