prot_Ecto-sp13_S_contig15816.4287.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15816.4287.1
Unique Nameprot_Ecto-sp13_S_contig15816.4287.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length139
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15816.4287.1 vs. uniprot
Match: D7G2X1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X1_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 4.360e-61
Identity = 122/145 (84.14%), Postives = 126/145 (86.90%), Query Frame = 0 
Query:    1 MGIGEDGENTDPDDEDMQEANDNDGSPMLTVRAATDRQSGDLSRDVDDDSSAPSTRERLLSRPSTSGAVLEISFRRRTGVQGGRRSYYAEAPVPVVDPAGTIARASRIVTD-------MMSPLDSLRGDVGFDNDDDNNNADVSG 138
            MGIGEDGENTDPDDEDM EAND+DGSPMLT+RAATDR SGDLS D D DSSAPSTRERLLSRPSTSGA+ EIS RRRTGVQGGRRSY AEAPVPVVDPAGTIARASRIVT+       MMSPLDSLRGDVGFDNDD   N DVSG
Sbjct: 4827 MGIGEDGENTDPDDEDMPEANDDDGSPMLTIRAATDRLSGDLSSDFDYDSSAPSTRERLLSRPSTSGAIPEISLRRRTGVQGGRRSY-AEAPVPVVDPAGTIARASRIVTELRLDGENMMSPLDSLRGDVGFDNDD---NTDVSG 4967
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15816.4287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2X1_ECTSI4.360e-6184.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15816contigEcto-sp13_S_contig15816:2437..2853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15816.4287.1mRNA_Ecto-sp13_S_contig15816.4287.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15816 481..3266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15816.4287.1 ID=prot_Ecto-sp13_S_contig15816.4287.1|Name=mRNA_Ecto-sp13_S_contig15816.4287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
MGIGEDGENTDPDDEDMQEANDNDGSPMLTVRAATDRQSGDLSRDVDDDS
SAPSTRERLLSRPSTSGAVLEISFRRRTGVQGGRRSYYAEAPVPVVDPAG
TIARASRIVTDMMSPLDSLRGDVGFDNDDDNNNADVSG*
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