prot_Ecto-sp13_S_contig15815.4286.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15815.4286.1
Unique Nameprot_Ecto-sp13_S_contig15815.4286.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length409
Homology
BLAST of mRNA_Ecto-sp13_S_contig15815.4286.1 vs. uniprot
Match: D7FPH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPH8_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 6.940e-113
Identity = 184/378 (48.68%), Postives = 241/378 (63.76%), Query Frame = 0
Query:    5 NIPSHVYDQIVAYAKGCTVRFVGSQERGEEKRNLHMQCVGTWALMKTFDTPTKLNAAMRKHIRDKSGIASNDRIKIVVKPLEGKQTFTDMVGYCCKDSGKGHYKTFRKNVTKAEANTALTEYRALQRQTVKDNRVEWGKENFWSILHRFKQENIRALTVSPQLAAQWLVNDGEYLPSYSWICPTGNSGMVSEAADAYWVALLTPKLFTRKHAYVLFFSGGYSGRTTSSFALWDNIDREFEELSVDEAKVCSHDRLRVQGAMDLARERAAREMAAYRHEPDGVLRFAVDRDSDEHDPLPAAPGQADCPAPRAVATRERLSTMVRTATDNSAASEPLPLLVYPNCVEAGCTKAGNGGMVTCFSCDGQLHRACGTLVNEDN 382
            NI   ++++  A+     VR + S ERG+   NLH+Q + T AL K F    K  AA+R+ +R   G  + D++KI +K L  +QTF+ MVGYC KD G+ H+KT  K V++ E N AL EYR LQR  V + R + GK+NFW +L RFKQE++R ++VSP     W +NDGE +PS++WICPT    M +  ADAY+ AL++P LFTRK AY+LFFSGG  GR +SSFA WD  DREF E++VD+AKVCSHDR  ++GAMD+ARER  R++A     P GV+ F VD DSD       A       A      R +   + RTA D S+ASE LPL++ P CVE GCTKAGN  MV C  CDG LHR+CG    E++
Sbjct:  333 NIKESLFNEGCAWMTKRAVRGITSMERGDINGNLHLQGIWTLALKKDFGDSKKEEAALRRKLRVDCGWTAADKVKITIKRLIKQQTFSGMVGYCSKDEGRSHFKTVTKGVSRTEVNIALAEYRTLQRFVVSELRTDIGKKNFWGVLRRFKQEHLRGISVSPVQLISWYINDGEGMPSHTWICPTSAFAMEAARADAYFTALMSPSLFTRKDAYLLFFSGGQGGRVSSSFAKWDYQDREFSEMTVDQAKVCSHDRQELEGAMDIARERIMRDIAESHRAPAGVVNFPVDADSDAGSDSDVAXXXXXXXA------RRQWDRIGRTAADTSSASEELPLIICPKCVEPGCTKAGNIAMVACNLCDGDLHRSCGVRGGEED 704          
BLAST of mRNA_Ecto-sp13_S_contig15815.4286.1 vs. uniprot
Match: D7G8U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U7_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 1.740e-108
Identity = 181/385 (47.01%), Postives = 239/385 (62.08%), Query Frame = 0
Query:   23 VRFVGSQERGEEKRNLHMQCVGTWALMKTFDTPTKLNAAMRKHIRDKSGIASNDRIKIVVKPLEGKQTFTDMVGYCCKDSGKGHYKTFRKNVTKAEANTALTEYRALQRQTVKDNRVEWGKENFWSILHRFKQENIRALTVSPQLAAQWLVNDGEYLPSYSWICPTGNSGMVSEAADAYWVALLTPKLFTRKHAYVLFFSGGYSGRTTSSFALWDNIDREFEELSVDEAKVCSHDRLRVQGAMDLARERAAREMAAYRHEPDGVLRFAVDRDSDEHDPLPAAPGQADCPAPRAVATRERLSTMVRTATDNSAASEPLPLLVYPNCVEAGCTKAGNGGMVTCFSCDGQLHRACGTLVNEDNPESTD----RRCSSCVSAGKGKRKA 403
            VR + S ERG    NLH+Q + T  L+K FD P K  AAMRK IR      S+ ++KIV+K L  +QTF+ M+GYC KD G+ H+KT  K V++ E N AL EYR LQR  V ++RVE GK+NFW +L RFKQE++R + VSP     W++ D + +PS SWICP+    M +  ADA+ +AL  P LF RKHAY+LFF+GG   R  +S   WD  DREF +++VD+AKVCSHD L ++GAMD ARERA RE+A  R    GV  F    DSD      +  G    P PR   +R   + + RT+ D S A+EPLPL+V P C+E GCT AGN GM++C  C G LHR CG     ++ +  D    +RC+ C    +GK++A
Sbjct:    2 VRGLVSLERGNVHGNLHLQGILTAGLVKYFDDPRKEEAAMRKSIRQACEWKSHVKVKIVIKRLMRQQTFSGMLGYCSKDQGRPHFKTSSKGVSQTEINVALAEYRKLQRVCVTEDRVELGKKNFWGLLRRFKQEHLRGIFVSPLQMVTWIIQDQQAVPSSSWICPSSAFPMDAARADAFGIALFCPSLFIRKHAYLLFFAGGQGDRIITSHEDWDTQDREFADMTVDQAKVCSHDHLELEGAMDAARERAVREVANARRYLPGVANFGFGPDSDSD--ATSDVGARAAPPPR---SRRVWAGIGRTSNDFSEANEPLPLIVSPKCIEPGCTNAGNMGMISCGRCHGDLHRGCGVSGGGNHDDECDSFVGQRCTPCAYPRRGKKRA 381          
BLAST of mRNA_Ecto-sp13_S_contig15815.4286.1 vs. uniprot
Match: D8LBK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK2_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 6.110e-64
Identity = 109/226 (48.23%), Postives = 147/226 (65.04%), Query Frame = 0
Query:    5 NIPSHVYDQIVAYAKGCTVRFVGSQERGEEKRNLHMQCVGTWALMKTFDTPTKLNAAMRKHIRDKSGIASNDRIKIVVKPLEGKQTFTDMVGYCCKDSGKGHYKTFRKNVTKAEANTALTEYRALQRQTVKDNRVEWGKENFWSILHRFKQENIRALTVSPQLAAQWLVNDGEYLPSYSWICPTGNSGMVSEAADAYWVALLTPKLFTRKHAYVLFFSGGYSGRTT 230
            NI   ++++  A+     VR V S ERG+   NLH+Q + T AL K F    K  AA+R+ +R   G  + D++KI +K L  +QTF+ MVG C KD G+ H+KT  K V++ E N ALTEYR LQR  V + R E GK+NFW +L RFKQE++R ++VSP     W +NDGE +PS++WICPT    M +  ADAY+ AL++P LFTRK AY+LFFSGG  GR +
Sbjct:  158 NIKESLFNEGCAWMTKRAVRGVTSMERGDMNGNLHLQGIWTLALKKDFGDSKKEEAALRRKLRVDCGWTAADKVKITIKRLIKQQTFSGMVGDCSKDEGRSHFKTVTKGVSRTEVNIALTEYRTLQRSVVSELRTEIGKKNFWGVLRRFKQEHLRGISVSPVQLISWYINDGEGMPSHTWICPTSAFAMEAARADAYFTALMSPSLFTRKDAYLLFFSGGQGGRVS 383          
BLAST of mRNA_Ecto-sp13_S_contig15815.4286.1 vs. uniprot
Match: D7G6N0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N0_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.790e-43
Identity = 124/408 (30.39%), Postives = 174/408 (42.65%), Query Frame = 0
Query:    5 NIPSHVYDQIVAYAKGCTVRFVGSQERGEEKRNLHMQCVGTWALMKTFDTPTKLNAAMRKHIRDKSGIASNDRIKIVVKPLEGKQTFTDMVGYCCKDSGKGHYKTFRKNVTKAEANTALTEYRALQR----QTVKDNRVEWGKENFWSILHRFKQENIRALTVSPQLAAQWLVNDGEYLPSYSWICPTGNSGMVSEAADAYWVALLTPKLFTRKHAYVLFFSGGYSGRTTSSFALWDNIDREFEELSVDEAKVCSHDRLRVQGAMDLARERAAREMAAYRHEPDGVLRFAVDRDSDEHDPLPAAPGQADCPAPRAVATRERLSTMVRTATDNSAASEPLPLLVYPNCVEAGCTKAGNGGMVTCFSCDGQLHRACGTLVNEDNPEST-----DRRCSSCVSAGKGKRKA 403
            N+   ++++  A+     VR V S ER +   NLH+Q + T +L K F    K  AA R+ +R   G  + D                           K H++  R+           T  R+ +     +++          +  S      +   R ++VSP     W +NDGE +PS++WICPT    M +  ADAY+ AL++P LFTRK AY+LFFSGG  GR +SSF  WD  DREF E++VD+AK                                                                   +R+    RTA D S+ASE LPL+V P CVE  CTKAGN  MV C  CDG LHR+CG    E++ ++        +CS C +   GKRK+
Sbjct:   88 NMKESLFNEGCAWMTKRAVRGVTSMERRDMNGNLHLQGIWTLSLKKDFGDSKKEEAASRRKLRVDCGWTAAD---------------------------KDHHQAPRQATDIQRTKDVHTSRRSPRACRGPRSISPAPSTAPSSDPSSPSFDLSRSTPRGISVSPVQLISWDINDGEGMPSHTWICPTSAFAMEAARADAYFTALISPSLFTRKDAYLLFFSGGQGGRVSSSFEKWDYQDREFSEMTVDQAKW------------------------------------------------------------------DRIG---RTAEDTSSASEDLPLIVCPKCVEPRCTKAGNIAMVACNLCDGDLHRSCGVRGGEEDADADVVEFQGIQCSRCSTTSHGKRKS 399          
BLAST of mRNA_Ecto-sp13_S_contig15815.4286.1 vs. uniprot
Match: A0A6H5JMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG5_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 8.330e-30
Identity = 96/313 (30.67%), Postives = 140/313 (44.73%), Query Frame = 0
Query:    1 MESGNIPSHVYDQIVAYAKGCT-VRFVGSQERGEEKRNLHMQCVGTWALMKTFDTPTKLNAAMRKHIRDKSGIASNDRIKIVVKPLEGKQTFTDMVGYCCKDSGKGHYKTFRKNVTKAEANTALTEYRALQRQTVKDNRVEWGKENFWSILHRFKQENIRALTVSPQLAAQWLVNDGEYLPSYSWICPTGNSGMVSEAADAYWVALLTPKLFTRKHAYVLFFSGGYSGRTTSSFALWDNIDREFEELSVDEAKVCSHDRLRVQGAMDLARERAAREMAAYRHEPDGVLRFAVDRDSDEHDPLPAAPGQADCPA 312
            ++SG+  S  ++ +    +G T +      + GE   +L +QCV T  + K +    K  AA+ K I   +G  + DR+KI +K L+  QTF           G+ H++T  KNV++ + N  L EYR LQR                             + VS      W +  G  +PS + + P+G   M    ADAY +AL+TP+LF RKH Y LFFSGG                 EFE ++ D+AK CSH R+ ++G +D AR +AA E  A R     V     D    E +       + D PA
Sbjct:   33 LDSGSGTSRTFNSLTIGTRGRTDIPLRLFDDMGELHGHLQLQCVVTLGIRKQYTDEAKELAALSKKISVDNGWTTADRVKITIKRLQRGQTFNRR--------GQVHFRTHAKNVSRPDINETLAEYRVLQRAV--------------------------GVEVSILQLMTWYIQPGLGMPSPTCVTPSGGWPMCPMRADAYMIALMTPELFPRKHCYSLFFSGGAG---------------EFEGMTHDQAKECSHKRMLLEGRLDQARAKAALEKVAARLSTGAVPGLCQDSSDSEGEQAVEQSRRPDQPA 296          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15815.4286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FPH8_ECTSI6.940e-11348.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8U7_ECTSI1.740e-10847.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LBK2_ECTSI6.110e-6448.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6N0_ECTSI1.790e-4330.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMG5_9PHAE8.330e-3030.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15815contigEcto-sp13_S_contig15815:1148..3050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15815.4286.1mRNA_Ecto-sp13_S_contig15815.4286.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15815 174..3369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15815.4286.1 ID=prot_Ecto-sp13_S_contig15815.4286.1|Name=mRNA_Ecto-sp13_S_contig15815.4286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=409bp
MESGNIPSHVYDQIVAYAKGCTVRFVGSQERGEEKRNLHMQCVGTWALMK
TFDTPTKLNAAMRKHIRDKSGIASNDRIKIVVKPLEGKQTFTDMVGYCCK
DSGKGHYKTFRKNVTKAEANTALTEYRALQRQTVKDNRVEWGKENFWSIL
HRFKQENIRALTVSPQLAAQWLVNDGEYLPSYSWICPTGNSGMVSEAADA
YWVALLTPKLFTRKHAYVLFFSGGYSGRTTSSFALWDNIDREFEELSVDE
AKVCSHDRLRVQGAMDLARERAAREMAAYRHEPDGVLRFAVDRDSDEHDP
LPAAPGQADCPAPRAVATRERLSTMVRTATDNSAASEPLPLLVYPNCVEA
GCTKAGNGGMVTCFSCDGQLHRACGTLVNEDNPESTDRRCSSCVSAGKGK
RKAPSPPT*
back to top