mRNA_Ecto-sp13_S_contig15811.4284.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15811.4284.1
Unique NamemRNA_Ecto-sp13_S_contig15811.4284.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: D7FWD0_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD0_ECTSI)

HSP 1 Score: 567 bits (1461), Expect = 3.110e-201
Identity = 300/334 (89.82%), Postives = 309/334 (92.51%), Query Frame = 1
Query:    1 MKIPPRSAIVNEEVPARNDGESTSPGAGANEQNSEAVCAPFFPRKGNTSLGRSYACLQMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            MKIPPRSAIVNEEVPA N+GESTS GAGAN+QNSEAVC  FFPRKGNTSLGR+YACLQ P LMALNFCSAVGIVAANKALFRH EGLGFATSLTGIHFLATA+GVRACRLCD+YKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLV+FKVVLPFKLLVTLVPICGGVALATAN TEV+AEGA WALAGLLAAAGYQILVKSTQDNLQ     LLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSA EPPLWL S PANGSGTTA        G+FWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQV+G
Sbjct:    1 MKIPPRSAIVNEEVPAHNNGESTSSGAGANDQNSEAVCVRFFPRKGNTSLGRTYACLQTPGLMALNFCSAVGIVAANKALFRHTEGLGFATSLTGIHFLATAVGVRACRLCDIYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVLFKVVLPFKLLVTLVPICGGVALATANDTEVSAEGASWALAGLLAAAGYQILVKSTQDNLQ-----LLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAVEPPLWLHSTPANGSGTTAGXXXXXXXGVFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVLG 329          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A6H5KCQ2_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ2_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 5.990e-139
Identity = 212/228 (92.98%), Postives = 217/228 (95.18%), Query Frame = 1
Query:    1 MKIPPRSAIVNEEVPARNDGESTSPGAGANEQNSEAVCAPFFPRKGNTSLGRSYACLQMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQ 684
            MKIPPRSAIVNEEVPA N+GESTSPGAGAN++NSE VCA FFPRKGNT LGR+YACLQ P LMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATA GVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQ NDVSFYQLMKILTTPAVVVLQLV+FKVVLPFKLL TLVPICGGVALATAN TEVAAEGAFWALAGLLAAAGYQILVKS QDNLQ
Sbjct:    1 MKIPPRSAIVNEEVPAFNEGESTSPGAGANDKNSEDVCARFFPRKGNTFLGRTYACLQTPGLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATAFGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQSNDVSFYQLMKILTTPAVVVLQLVLFKVVLPFKLLATLVPICGGVALATANDTEVAAEGAFWALAGLLAAAGYQILVKSAQDNLQ 228          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7J6M3L0_PERCH (TPT domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6M3L0_PERCH)

HSP 1 Score: 188 bits (478), Expect = 6.500e-54
Identity = 115/272 (42.28%), Postives = 159/272 (58.46%), Query Frame = 1
Query:  187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            MALNF ++  I+  NK  + +  G  +AT+LT +HFL T +G+  C +   +  KP+    VLP+ +AFC FV FNNLSLQYN V  YQLMK++TTP +VV+Q + +   LP   L+ LVPIC GV LATA   EV   G F+ +AG+L+ + YQI VK+ QD L+ SS QLL +QAP +A+++++V P  DD   L+     T++                                  +V  S  +AFLVNLS FLVIG+TSP+SY V+G
Sbjct:   22 MALNFVTSTSIIWINKLAYNN--GFTWATTLTVMHFLVTFIGLCLCVMSGQFAYKPISVRSVLPLCVAFCGFVVFNNLSLQYNTVGTYQLMKVMTTPVIVVIQYICYSTTLPLIQLLALVPICLGVILATATSVEVNPLGIFFGVAGILSTSLYQIWVKTKQDELKCSSQQLLLYQAPLSALMLMLVVPMADDITTLMRFDWYTYAGC--------------------------------LVIASSGMAFLVNLSIFLVIGKTSPISYNVLG 259          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7J6L489_PEROL (Mitotic spindle checkpoint protein Bub3 n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6L489_PEROL)

HSP 1 Score: 191 bits (486), Expect = 6.490e-52
Identity = 119/272 (43.75%), Postives = 159/272 (58.46%), Query Frame = 1
Query:  187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            MALNF SA  I+  NK  + +  G  +AT+LT +HFLAT +G+  C +   +  K L    VLP+ ++FC FV FNNLSLQYN V  YQLMK++TTP +V +Q + +   LPF  L+ LVPIC GVALATA   EV   G  + +AG+L+ + YQI VK+ Q+ L+ SS QLL +QAP + +++L V P  DD   L+     T++                                 G+V  SC +AFLVNLS FLVIG+TSPVSY V+G
Sbjct:  388 MALNFLSATCIIWINKLAYNN--GFTWATTLTVLHFLATFIGLCLCIMAGQFTHKRLPIRSVLPLCVSFCGFVVFNNLSLQYNTVGTYQLMKVMTTPVIVAIQYLYYSTTLPFNQLLALVPICIGVALATATSVEVNLLGVTFGVAGILSTSLYQIWVKTKQEELKCSSQQLLLYQAPLSMIMLLSVVPAVDDIPTLIDFDWATYAG--------------------------------GLVVASCAMAFLVNLSIFLVIGKTSPVSYNVLG 625          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7J6PIF6_PEROL (UBX domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PIF6_PEROL)

HSP 1 Score: 191 bits (486), Expect = 6.990e-52
Identity = 119/272 (43.75%), Postives = 159/272 (58.46%), Query Frame = 1
Query:  187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            MALNF SA  I+  NK  + +  G  +AT+LT +HFLAT +G+  C +   +  K L    VLP+ ++FC FV FNNLSLQYN V  YQLMK++TTP +V +Q + +   LPF  L+ LVPIC GVALATA   EV   G  + +AG+L+ + YQI VK+ Q+ L+ SS QLL +QAP + +++L V P  DD   L+     T++                                 G+V  SC +AFLVNLS FLVIG+TSPVSY V+G
Sbjct:   20 MALNFLSATCIIWINKLAYNN--GFTWATTLTVLHFLATFIGLCLCIMAGQFTHKRLPIRSVLPLCVSFCGFVVFNNLSLQYNTVGTYQLMKVMTTPVIVAIQYLYYSTTLPFNQLLALVPICIGVALATATSVEVNLLGVTFGVAGILSTSLYQIWVKTKQEELKCSSQQLLLYQAPLSMIMLLSVVPAVDDIPTLINFDWATYAG--------------------------------GLVVASCAMAFLVNLSIFLVIGKTSPVSYNVLG 257          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A0S4IKX4_BODSA (Transmembrane protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IKX4_BODSA)

HSP 1 Score: 175 bits (444), Expect = 5.340e-49
Identity = 109/277 (39.35%), Postives = 159/277 (57.40%), Query Frame = 1
Query:  172 QMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            ++P  +ALN CS++GIV +NK +F+      + T LT IHF+ T +G+  CR C ++++K +   ++LP+ ++FC FVA  NLSL YN V FYQLMK+LTTP +VV+Q + +    P  + ++L   C GVA+AT   +E    G   A++ LL    YQI V + Q  L+ +S QLL+ QAP +AV+++ + P  DD   L          +E P        N    TA               + +S LLAFLVN+S FLVIG+TSPV+Y V+G
Sbjct:   18 RVPFYLALNACSSIGIVFSNKVVFQ-VYNFKYGTLLTFIHFIFTFVGLEICRQCGMFELKRIDLKKILPLCVSFCGFVALTNLSLVYNSVGFYQLMKVLTTPIIVVIQTLFYNETFPTNIKLSLALTCVGVAIATVTDSEANLIGTLVAISALLVTCMYQIWVGTKQKELECNSYQLLYWQAPISAVILVPIIPLLDDLSTL----------SEWP--------NSDAVTA---------------IIISSLLAFLVNISIFLVIGKTSPVTYNVLG 260          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A0G4EQF8_VITBC (TPT domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EQF8_VITBC)

HSP 1 Score: 177 bits (449), Expect = 6.320e-49
Identity = 115/280 (41.07%), Postives = 161/280 (57.50%), Query Frame = 1
Query:  175 MPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFD----DTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            +P  MALNF ++V I+ ANK  F    G  F  SLT +HF  T +G+       ++  K L    V+PI+LAFC FV FNNLSLQYN V  YQL+K+LTTP ++VLQ  ++K VLPF  +++LVP+C GVALAT    EV   G  +  AG+++ + YQI VK  Q++LQ +S QLL++Q+  + V++  + PF +    D      +++  F+      W+                      FW+     S  LAFLVNLS FLVIG+TSP+SY V+G
Sbjct:    9 IPFYMALNFTTSVLIIWANKIAFN--AGFNFTVSLTTLHFTFTFVGLEIGSRYGLFDKKALSIISVVPISLAFCGFVVFNNLSLQYNAVGIYQLLKVLTTPTIIVLQHTLYKQVLPFWQIISLVPVCVGVALATVTSIEVNFWGLVFGGAGIISTSLYQIWVKKEQESLQCTSPQLLYYQSAVSGVMLCCLVPFMEPLVTDKDGNPGLLLFDFTP-----WVT---------------------FWI---LTSAALAFLVNLSIFLVIGKTSPISYNVLG 257          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7S1PXY6_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1PXY6_NEODS)

HSP 1 Score: 172 bits (437), Expect = 3.700e-47
Identity = 110/277 (39.71%), Postives = 157/277 (56.68%), Query Frame = 1
Query:  172 QMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            ++P  + LN  S++GIV  NK +F+  +   + T LT IHF+ T +G+  CR C  ++ KP+K   VLP++L+FC FVA  NLSL YN V FYQLMK+LTTP +V +Q V +    P  + ++L   C GV +A+ +  E    G   AL+ LL  + YQI V + Q  L  +S QLL++QAP +A+++L + P FDD   L A             W              + +T  A       + +S +LAFLVNLS FLVIG+TSPV+Y V+G
Sbjct:   92 RIPFYLFLNASSSIGIVFTNKMVFQMYD-FKYGTLLTFIHFIFTFIGLEICRWCGAFERKPVKIMDVLPLSLSFCGFVALTNLSLVYNTVGFYQLMKVLTTPMIVTIQTVFYGETFPMNIKLSLALTCVGVTIASVSDPEANFIGTLVALSALLVTSMYQIWVGTKQKELGCNSYQLLYYQAPLSALILLPIIPLFDDLSTLKA-------------W-------------PNNETITA-------ILISSVLAFLVNLSIFLVIGKTSPVTYNVLG 334          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A8J2AI62_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2AI62_9DINO)

HSP 1 Score: 170 bits (431), Expect = 4.950e-46
Identity = 118/276 (42.75%), Postives = 165/276 (59.78%), Query Frame = 1
Query:  187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVR-ACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEV-AAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAP--FFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            M LNF SAVGI+  NK +  H  G  +A+ LT +HF+A+ +G+  + R   +++ K  K  +V+P+  +F AFV FNNLSLQYN V  YQL+K+L TP VVVLQ  +   +L F   V+L+PIC GV+LAT +  EV    G F+ + G+ + + YQI VKS Q +LQ++  QLLHHQ+    + + M+AP  F+ D   L  +     S    P+             A+      +  F++  V  SC LA+LVNLSTFLVIG+TSPVSYQV+G
Sbjct:  108 MMLNFWSAVGIIWVNKWIMNH--GWTWASILTWMHFVASFIGLEISWRTLGLFEPKETKLMKVVPLCASFIAFVVFNNLSLQYNTVGIYQLLKVLMTPVVVVLQFCMHGTLLTFWQTVSLIPICVGVSLATVSSLEVNGLTGVFFGVMGIFSTSLYQIWVKSKQSDLQLNPFQLLHHQS---FLSMWMLAPLAFYVDRSLLFCLQDYAMSTLGDPV------------CADKVIRPLSDPFFLAGVGTSCCLAYLVNLSTFLVIGKTSPVSYQVLG 366          
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: F2UIL3_SALR5 (Solute carrier family 35 member E3 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UIL3_SALR5)

HSP 1 Score: 167 bits (424), Expect = 5.610e-46
Identity = 112/281 (39.86%), Postives = 164/281 (58.36%), Query Frame = 1
Query:  166 CLQMPSL-MALNFCSAVGIVAANKALFRHAEGLGFAT-SLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
            CLQ   L M LN+ S++ IV  NK  + +    GF + +LT IHFL T  G++ C +  +++VK L+   VLP++LAFC FV F NLSL YN V FYQL K++TTPA+V++  V +K      +L++L+ +C GVA AT       ++G F+A  G+L  + YQI VK+ Q +L+VS+ QLL +QAP +A L+ ++ PF +   E   ++ + +SA   P  L                           V  S ++AFLVNLS FLVIG+TSP++Y V+G
Sbjct:    6 CLQPTQLFMLLNYTSSIMIVFLNKMAYTY----GFPSITLTMIHFLMTFAGLKVCSMMGIFQVKRLRIMDVLPLSLAFCGFVVFTNLSLLYNTVGFYQLAKVMTTPAIVLVHWVFYKQSYSKPILLSLLLVCIGVAQATQADVTTNSKGLFFATCGVLVTSIYQIWVKTKQQDLEVSAFQLLFYQAPLSAGLLAVIIPFVEPPFEPYGVLAQEWSA---PALLA--------------------------VLGSSIMAFLVNLSIFLVIGKTSPITYNVLG 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD0_ECTSI3.110e-20189.82TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KCQ2_9PHAE5.990e-13992.98TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7J6M3L0_PERCH6.500e-5442.28TPT domain-containing protein n=1 Tax=Perkinsus ch... [more]
A0A7J6L489_PEROL6.490e-5243.75Mitotic spindle checkpoint protein Bub3 n=4 Tax=Pe... [more]
A0A7J6PIF6_PEROL6.990e-5243.75UBX domain-containing protein n=1 Tax=Perkinsus ol... [more]
A0A0S4IKX4_BODSA5.340e-4939.35Transmembrane protein, putative n=1 Tax=Bodo salta... [more]
A0A0G4EQF8_VITBC6.320e-4941.07TPT domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A7S1PXY6_NEODS3.700e-4739.71Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
A0A8J2AI62_9DINO4.950e-4642.75Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
F2UIL3_SALR55.610e-4639.86Solute carrier family 35 member E3 n=1 Tax=Salping... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15811contigEcto-sp13_S_contig15811:501..3922 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score566.2
Seed ortholog evalue9.9e-159
Seed eggNOG ortholog2880.D7FWD0
Model size1002
KEGG koko:K11665,ko:K14301,ko:K15285
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000278,GO:0000281,GO:0000910,GO:0003006,GO:0003674,GO:0005215,GO:0005338,GO:0005457,GO:0005459,GO:0005460,GO:0005464,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0007049,GO:0007275,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009058,GO:0009605,GO:0009607,GO:0009624,GO:0009791,GO:0009832,GO:0009833,GO:0009987,GO:0010154,GO:0010191,GO:0010192,GO:0010214,GO:0012505,GO:0015075,GO:0015165,GO:0015291,GO:0015297,GO:0015711,GO:0015780,GO:0015783,GO:0015786,GO:0015790,GO:0015931,GO:0015932,GO:0016020,GO:0022402,GO:0022414,GO:0022804,GO:0022857,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0034220,GO:0036080,GO:0042546,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044249,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048354,GO:0048359,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051301,GO:0051704,GO:0051707,GO:0055085,GO:0061458,GO:0061640,GO:0071554,GO:0071669,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072334,GO:0090480,GO:0090481,GO:0097708,GO:0098588,GO:0098656,GO:0098791,GO:1901264,GO:1901505,GO:1903047
Exons5
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
Ec32 ortholog descriptionTriose-phosphate transporter domain
Ec32 orthologEc-25_000550.1
EC3.6.4.12
Cds size1002
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03019,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462836.3251848-CDS-Ecto-sp13_S_contig15811:500..6351681462836.3251848-CDS-Ecto-sp13_S_contig15811:500..635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15811 501..635 +
1681462836.3386579-CDS-Ecto-sp13_S_contig15811:1173..14071681462836.3386579-CDS-Ecto-sp13_S_contig15811:1173..1407Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15811 1174..1407 +
1681462836.348393-CDS-Ecto-sp13_S_contig15811:1563..17041681462836.348393-CDS-Ecto-sp13_S_contig15811:1563..1704Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15811 1564..1704 +
1681462836.356666-CDS-Ecto-sp13_S_contig15811:2804..29781681462836.356666-CDS-Ecto-sp13_S_contig15811:2804..2978Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15811 2805..2978 +
1681462836.367332-CDS-Ecto-sp13_S_contig15811:3604..39221681462836.367332-CDS-Ecto-sp13_S_contig15811:3604..3922Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15811 3605..3922 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15811.4284.1prot_Ecto-sp13_S_contig15811.4284.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15811 501..3922 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15811.4284.1

>prot_Ecto-sp13_S_contig15811.4284.1 ID=prot_Ecto-sp13_S_contig15811.4284.1|Name=mRNA_Ecto-sp13_S_contig15811.4284.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=334bp
MKIPPRSAIVNEEVPARNDGESTSPGAGANEQNSEAVCAPFFPRKGNTSL
GRSYACLQMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLA
TALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFY
QLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAA
EGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVA
PFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFW
VGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG
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mRNA from alignment at Ecto-sp13_S_contig15811:501..3922+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15811.4284.1 ID=mRNA_Ecto-sp13_S_contig15811.4284.1|Name=mRNA_Ecto-sp13_S_contig15811.4284.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15811:501..3922+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATCCCACCACGCTCGGCGATCGTCAACGAAGAAGTGCCTGCTCG CAACGACGGCGAATCAACCTCACCGGGAGCGGGCGCCAACGAACAGAATT CTGAGGCTGTTTGTGCACCATTTTTCCCACGCAAGGTGCGTGCTGCTTGA ACATTGACATCGACGCAACAGCACACGAAGTCTGAGAAGATACCCTTCAT ACCTTATACGACACAAGATAACACACCCCCTGCACCAATTTTCAAGGCTC GGTTTATAAACAGCAGAAGTAATGGGGGTGCCGAAAAGAGCGGCGTTGAG GTCGTCTGGTCAAGAGCTCTCCGAAAACGTTTCGTTTCGTCTACGCATAT TCTTCATCGTGGAGTTTGCGAGATTTGAAAATCGGTCCAGGGAGGTGTGA TCTTGTGTCGTACACGCTCGTACATGCTGTAGACTACGGTTTTCTAGTCT ACTTGCTGGACTTCATGAAAGGTACACAAGTTCCTACGATTGTTATGCCC GTTTTCATGCAAAACATTGCCGCCAAACTCCAGGAGATTGTACCCGGGCG CCGACTCTCTACAAGCGCCAGTTCGCACACACCGCAGAGTGCTTATTTAT CGTGTAAGTATCATTTTCCCGCGCGTGCTGAAAAGTTTTATGCCCCCCCA CCCCCAAAATACCCTCCTTTCAGGGAAACACCTCTCTAGGTAGAAGCTAT GCCTGCCTGCAAATGCCAAGCCTCATGGCCCTCAATTTCTGCTCGGCGGT GGGAATCGTGGCGGCCAACAAGGCGCTGTTTCGCCACGCGGAAGGATTGG GCTTCGCCACGTCGCTAACGGGAATCCACTTCTTGGCCACAGCCCTCGGA GTGCGGGCGTGCCGTCTTTGCGACGTATACAAAGTCAAGCCTCTCAAGCA GACCCAGGTTAGGCTTCGCAAATAGTAGGCGACAGACAGGCGCAGTCTTA GTTGCATGTACCTTTCTCCCCCATTCACATTCTCTTCGTCGTATCTGACA AAGGTTGTGTCGGAGAACTTGTGCCAATCGAATTTGTGCTAATTCCGTTT CCCTCTTGTCCAGGTGCTGCCGATCACGCTGGCTTTCTGTGCATTTGTGG CCTTCAACAACCTCAGCCTCCAGTACAACGACGTTTCCTTTTACCAGCTC ATGAAGATTCTCACAACGCCCGCCGTCGTCGTACTCCAGCTGGTTATTTT CAAGGTACAGTGCCGTACAGCAACCAATGTTGCCCATTGACCAAACTACT GCATCATATCGGGGACCACCCAACCGGCGCGTCAAGTAGAACTTTGTCGT TCGTTGTACCACTTACTGCAAATTAACATTCGAGCGCCCAAGGCGCATGC CAATGAAGCAATTGCCGAGGGTTGGGATGTTTTTTCGCCGACGAATGCCC TCACTAGTTGGAGTGTCGAGCGTTCTTCTCCGGCAAAAAAGCTGTGACCC CGTGTTTCATGACGCCGGTTTGGTGTTTCATGCTTCACGAGCTACCAAGG AGCGAGGAGGCAACACGGATGTTGGTAGGGGACAGAGCAGAATGTGTCCC GGGGGTCTAAAAACACCCCAAGTGCGGATTGAGGAACAGTAGTTTGGGTT GTCGGTGGAATCAGCACGAGGGGGCTGCCGATGTCGGCAGAAGAAGGCTC GTCTACATGATGCTCTTGAGTCTTTGGAGTTGTTGTCCTCGATCAAATAC TTCTGACAGAGACCCTCGAAGAGATTGCTTACTCCGAATAACACAACGAT AGGGACCACCTTATTGGGTCGACAAAGATATTTCTTGTTAAAAATGCTGT TGAACTCCGCCATAATTCTATTTTTTGTCGGTCATTTCCGCGCGCAAGAA AGCATGCCCCTAGTGTTAGGGACCAATCTGAAAGCACCGCCTTGCAGAGA TGCCTAGTGTGCTCCCCTTCCAGAGCGGTTATCGACAAATACTAACACGG TGGTACCGGGAAGACGATTTATGATACCTTTCGAACACGTTCAACTCAAC GGCAAAGTCGACAGTCTGTGCACGATTTCAAGGACACGAAATACCCTGCG CCCTCTGAACGGATTTCAGGGAGAATGTCGGCGCAAATTCGCTCGGGGGT AGTTTTGAGAAACATGCGAGAGTACCGGAACGGCTCGATGGCGCATGGAG TCCCGAATACATGAGACCGCCAATCTCTTGTTGCACATTGTCCGACGCTT TTTCCCATCCATCCCGAAGCAACAATGCCCCTGATTTCACCCCCGTTCCC TCCACACAACGCGGTGCGGGTTCCCCGGACACTGCTACCTTGCACGTCGA GCAGGTGGTTTTGCCCTTCAAGCTGTTGGTCACTCTCGTGCCCATCTGCG GGGGGGTGGCTCTGGCGACAGCCAACCACACGGAGGTTGCCGCGGAGGGG GCGTTTTGGGCGTTGGCGGGACTGTTGGCTGCGGCCGGGTACCAGATCTT GGTCAAAAGTACCCAGGATAACTTGCAGGTGCCCTTGTTCGCGCCCCCCC CTGCGACCGCCGCATGGAAGTGGTGTGTGGCAGGACGCACGAAGTTTCCA AGTTTGGTTAAACCACGTTTTTCTGAGAAATCAGACAGACGTGTTTGACC CTCTGCAGGCACGAAGTATTCCGTTTTCCTATCTCGACCGTTTCTCACAA TCGTGGAACGACCGGCCAAATACACGCCTACGTACGACACACAGTGACTT CATTAACAACACCAAGCACGGAACCGTTTGTTTTACATGGACGCCACGTG TGTGGCACACCAAAGGCGAAAATATGGCACAGAGCACTTTCCTCCGTGAA ATCTGATATTTGACCTCATTATTTGAGGGCAAGACTTTTTGTTCAACCGC CTCTCCCGTCTACCAATCGGTTTGGTTGACCGTGATCAGCGTCGCGACAT GATCTCATTCGGCGCAATTGCAAGGTTGGGAAGCACGTGTGGTGTCGACA ACGTCGAAAACGGCGTCACAAAGTAAACGTTGCAAGCTGCACAGCAAACC GGGTGATTCTAGGATGGCATCGGGTTCTTTTCTCCCTTTTCTTTTTCTGG GCTTGTTGGACTTGAATCAAGCCAGGCATCTTGCGCTGGACCCGGATGCC TCAGGTGTCCTCTCTCCAACTTCTTCACCACCAAGCGCCACAGGCTGCGG TTTTGATCCTGATGGTGGCGCCGTTTTTCGACGACACGGGGGAGCTCGTT GCGATGATGATTCGAACCTTCTCAGCAGCAGAACCCCCGCTTTGGCTTCG TTCTGCTCCTGCGAACGGGAGTGGGACAACGGCAGAGTCGGGACAGACGG CGGGAGCAGGGTTGTTTTGGGTGGGGATGGTGTTCCTGTCGTGCCTGTTG GCGTTCCTGGTGAACCTGAGCACCTTCCTCGTCATCGGAAGGACGTCCCC CGTCTCGTACCAGGTGATGGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15811:501..3922+

>mRNA_Ecto-sp13_S_contig15811.4284.1 ID=mRNA_Ecto-sp13_S_contig15811.4284.1|Name=mRNA_Ecto-sp13_S_contig15811.4284.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1002bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15811:501..3922+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATCCCACCACGCTCGGCGATCGTCAACGAAGAAGTGCCTGCTCG
CAACGACGGCGAATCAACCTCACCGGGAGCGGGCGCCAACGAACAGAATT
CTGAGGCTGTTTGTGCACCATTTTTCCCACGCAAGGGAAACACCTCTCTA
GGTAGAAGCTATGCCTGCCTGCAAATGCCAAGCCTCATGGCCCTCAATTT
CTGCTCGGCGGTGGGAATCGTGGCGGCCAACAAGGCGCTGTTTCGCCACG
CGGAAGGATTGGGCTTCGCCACGTCGCTAACGGGAATCCACTTCTTGGCC
ACAGCCCTCGGAGTGCGGGCGTGCCGTCTTTGCGACGTATACAAAGTCAA
GCCTCTCAAGCAGACCCAGGTGCTGCCGATCACGCTGGCTTTCTGTGCAT
TTGTGGCCTTCAACAACCTCAGCCTCCAGTACAACGACGTTTCCTTTTAC
CAGCTCATGAAGATTCTCACAACGCCCGCCGTCGTCGTACTCCAGCTGGT
TATTTTCAAGGTGGTTTTGCCCTTCAAGCTGTTGGTCACTCTCGTGCCCA
TCTGCGGGGGGGTGGCTCTGGCGACAGCCAACCACACGGAGGTTGCCGCG
GAGGGGGCGTTTTGGGCGTTGGCGGGACTGTTGGCTGCGGCCGGGTACCA
GATCTTGGTCAAAAGTACCCAGGATAACTTGCAGGTGTCCTCTCTCCAAC
TTCTTCACCACCAAGCGCCACAGGCTGCGGTTTTGATCCTGATGGTGGCG
CCGTTTTTCGACGACACGGGGGAGCTCGTTGCGATGATGATTCGAACCTT
CTCAGCAGCAGAACCCCCGCTTTGGCTTCGTTCTGCTCCTGCGAACGGGA
GTGGGACAACGGCAGAGTCGGGACAGACGGCGGGAGCAGGGTTGTTTTGG
GTGGGGATGGTGTTCCTGTCGTGCCTGTTGGCGTTCCTGGTGAACCTGAG
CACCTTCCTCGTCATCGGAAGGACGTCCCCCGTCTCGTACCAGGTGATGG
GG
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