mRNA_Ecto-sp13_S_contig1581.4282.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1581.4282.1
Unique NamemRNA_Ecto-sp13_S_contig1581.4282.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: D8LSD1_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD1_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 3.600e-181
Identity = 293/346 (84.68%), Postives = 297/346 (85.84%), Query Frame = 1 
Query:   88 MIDTKLEEIRAAVAECHVGKDGPTHEARQQENARRIRVFKKLDAYAQDLVQQLAAATASNEDTSRIEARQRELDALASTLVVRPVQPKCGPLLEALDLIWRVPAVMLFLLFMGFVVSIPLIMLTMVEQQIFLALNGGGNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSRDGLSQRLRQ 1125
            MIDTKLE+IRAAVAECHVGKDG THEARQQENARRIRVFKKLDAYAQDLVQQLAAA ASNEDTSRIE           TLV   +Q + GP   A       P V       GFVVSIPLIMLTMVEQQIFLALNGG NGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEF GESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKK           FHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSR+GLSQRLRQ
Sbjct:    1 MIDTKLEDIRAAVAECHVGKDGSTHEARQQENARRIRVFKKLDAYAQDLVQQLAAAAASNEDTSRIEG----------TLVPACLQ-RAGPPTGA-----GCPGVDTG----GFVVSIPLIMLTMVEQQIFLALNGGSNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFMGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKGA---------FHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSREGLSQRLRQ 317
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A6H5L1M9_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M9_9PHAE)

HSP 1 Score: 486 bits (1252), Expect = 9.600e-169
Identity = 267/324 (82.41%), Postives = 271/324 (83.64%), Query Frame = 1 
Query:   88 MIDTKLEEIRAAVAECHVGKDGPTHEARQQENARRIRVFKKLDAYAQDLVQQLAAATASNEDTSRIEARQRELDALASTLVVRPVQPKCGPLLEALDLIWRVPAVMLFLLFMGFVVSIPLIMLTMVEQQIFLALNGGGNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVK 1059
            MIDTKLEEIRAAVAECHVGKDG THEARQQENARRIRVFKKLDAYAQDLVQQ+AAA ASNEDTSRIEA QRELDALASTLVVRPVQPKC PLLEALDLIWRVPAVMLFLLFMGFVVSIPLIMLTMVEQQIFLALNGG NGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEF GESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQ                                              FHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGK +++
Sbjct:    1 MIDTKLEEIRAAVAECHVGKDGSTHEARQQENARRIRVFKKLDAYAQDLVQQIAAA-ASNEDTSRIEACQRELDALASTLVVRPVQPKCRPLLEALDLIWRVPAVMLFLLFMGFVVSIPLIMLTMVEQQIFLALNGGSNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFMGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQGA--------------------------------------------FHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKEILE 279
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A835YU14_9STRA (PlsC domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU14_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.940e-35
Identity = 88/227 (38.77%), Postives = 134/227 (59.03%), Query Frame = 1 
Query:  433 VSIPLIMLTMVEQQIFLALNGGGNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFKG----ESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWN-----VNQCGKVVVKYHRPIEAAE 1086
            V++PL++LT +E +I +AL G G      S G   IL +    W+LL+ G++VR E +G    E   +PA+++FTH S LD +++L   P    A+VK  + AVP LGW+  + G +PI+R  R +AV ++  A E  + +   +A++PEGTRS+TGQL PFKK           FH+ +QL+WP++P+TIHGA+ L+P +         + G V V+YH  I   E
Sbjct:    3 VAVPLVLLTKLESEI-IAL-GLGPPFPRLSTGAKRILAQ----WMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGA---------FHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRYHALIRVGE 214
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A3P3Y9V1_PLABS (1-acyl-sn-glycerol-3-phosphate acyltransferase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y9V1_PLABS)

HSP 1 Score: 107 bits (267), Expect = 2.660e-22
Identity = 68/189 (35.98%), Postives = 100/189 (52.91%), Query Frame = 1 
Query:  562 WLLLLMGIQVRAEFKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSRDGLSQRLRQA 1128
            W  L +G+QVR     +   RP + +F+H S LD + +    P  L  + K  L  VP++GW+ A  G IPI+R  R  A+++L   A         + +APEGTRS TG L  FKK          PFHM  + + PV+PV I  AY+L P +  + + G V V+   PI  ++  + +GLS+ +RQA
Sbjct:  171 WAALCLGLQVRVIGTEKLPCRPYLFMFSHGSMLDPIALGAISPVPLRFIGKRVLFMVPIIGWLFALYGHIPIDRQSRTDAIESLKAGARLMVRSGASIGIAPEGTRSLTGHLQSFKKG---------PFHMAIRTRMPVVPVIIEDAYQLLPPRRWLPRPGCVTVRALSPIAVSDQDTVEGLSRTVRQA 350
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A7C2SD30_9DELT (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2SD30_9DELT)

HSP 1 Score: 95.9 bits (237), Expect = 4.370e-19
Identity = 66/192 (34.38%), Postives = 98/192 (51.04%), Query Frame = 1 
Query:  562 WLLLLMGIQVRAE-FKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAA--EIKSRDGLSQRLRQA 1128
            W+    GI V AE  +     R  + +  H S LD   I+ TLP +   V K EL  +P+ GW +   G + I+RG R  AV +L  AA R R     V + PEGTRS+TG + PFK            FH+  + Q P++P+T+ G++ L P +    + G + V Y +PIE     ++ R+ L +R+R A
Sbjct:   68 WIFATCGITVEAEGLENVDARRAHVFMSNHQSVLDIGAIVATLPVSWRFVAKRELTWIPLFGWALRLGGHVIIDRGRRERAVASLQRAARRIRA-GTSVIIFPEGTRSETGVMRPFKSGG---------FHLAIEAQAPILPITVSGSHRLTPKRSLRVESGHMKVVYGKPIETRGLPLEEREALKERVRAA 249
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A024UVB1_9STRA (PlsC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVB1_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.730e-19
Identity = 66/184 (35.87%), Postives = 99/184 (53.80%), Query Frame = 1 
Query:  565 LLLLMGIQV----RAEFKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGW-IMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSRD 1101
            L +  GIQV    R   K E+L    +L+FTH S LD ++I GT P +L  + K+ L  +P++GW      G IPI+R +R ++ ++L   A+   E    VA++PEG+RSK+GQL  FKK          PF++Q  +   + P  +HGA+EL+P        GK  V+Y    +    KSR+
Sbjct:  175 LCVAAGIQVSISGRDNMKMENLKDSTILMFTHGSNLDGLMIQGTSPTSLKFIGKKALFMLPIVGWGFRWGFGNIPIDRSNREASKRSLKALAKAVIEYGRSVAISPEGSRSKSGQLQDFKKG---------PFYLQSDVNKSITPAVVHGAFELWPPGRIFTLSGKAHVEYLPQFQVDPTKSRN 349
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A2A4Z296_9FLAO (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A4Z296_9FLAO)

HSP 1 Score: 95.1 bits (235), Expect = 4.760e-19
Identity = 60/175 (34.29%), Postives = 98/175 (56.00%), Query Frame = 1 
Query:  565 LLLLMGIQVRAE-FKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAE 1086
            ++ ++GI+++    +     +P + +  H S LD +V+  +LP  L  + K+EL  VP++GW M   G I I+R ++  AV++L +AA + +  +  V M PEGTR+KTG LGPFKK           FH+       ++P+ I G Y ++P K      G VVV+  +PIEA++
Sbjct:   46 VMKIVGIKLKVHGVENVPTDKPVIFVANHCSHLDIIVLCRSLPVNLHFIGKKELAWVPIVGWYMFIAGHIFIDRSNKRKAVESLKKAAVKIKNGKRVV-MYPEGTRTKTGALGPFKKGA---------FHLALDAGVSIVPIHIDGTYNVWPAKSRTITPGDVVVRIGKPIEASK 210
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A485KN70_9STRA (Aste57867_9414 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN70_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.580e-18
Identity = 65/184 (35.33%), Postives = 95/184 (51.63%), Query Frame = 1 
Query:  562 WLLLLMGIQVRA---EFKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMA-SRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSRD 1101
            WL L  GIQ+     E  G+ L+   + +FTH S LD ++I GT P  L  + K+ L  +P++GW    + G IPI+R +  ++ ++L   A    +    VA++PEGTRSK GQL  FKK          PF++Q  ++  + P  +HGAYEL+P        GK  V Y         KSR+
Sbjct:  174 WLCLASGIQIYTNGRENLGDKLTDSTIAMFTHGSNLDGLMIQGTSPTTLKFIGKKALFMIPIVGWSFRWAFGNIPIDRSNIEASKRSLKALASAVIDYGRSVAISPEGTRSKCGQLEDFKKG---------PFYLQTDVKKSITPCLVHGAYELWPPGRLFTLSGKAYVDYLPQFHVDPKKSRN 348
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BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A5C6RRA9_9FLAO (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Vicingus serpentipes TaxID=1926625 RepID=A0A5C6RRA9_9FLAO)

HSP 1 Score: 92.8 bits (229), Expect = 3.200e-18
Identity = 62/174 (35.63%), Postives = 95/174 (54.60%), Query Frame = 1 
Query:  565 LLLLMGIQVRAEFKGE-SLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAA 1083
            LL + GI++    K    L RP + +  H S LD   +  +LP  L  + K+EL  VP++GW M   G I I+R ++  A+++L  A+++ +  +  V M PEGTRSK G+LG FKK           FH+  Q   P++PV+I G Y ++P   N    G V V+  +PIE++
Sbjct:   45 LLWIAGIKLEVNGKENVPLDRPVIFIANHCSHLDIGTLCRSLPVNLHFIGKKELAWVPIVGWYMWVAGHIFIDRSNKKKAIKSLEVASQKIKSGKSVV-MYPEGTRSKNGKLGNFKKGA---------FHLAMQSGVPIVPVSIKGTYNVWPANSNKITPGNVSVEIGKPIESS 208
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Match: A0A6L7KF37_9BACT (1-acyl-sn-glycerol-3-phosphate acyltransferase n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L7KF37_9BACT)

HSP 1 Score: 92.4 bits (228), Expect = 6.640e-18
Identity = 54/152 (35.53%), Postives = 83/152 (54.61%), Query Frame = 1 
Query:  646 HVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKVVVKYHRPIEAAEIKSRD 1101
            H S  D V +L  LP+A   ++K+E   VP+LGW   + G  P++R +  +A  +L  A    +  + FV +APEGTRS+TG+LGPFK            F +  +   PV+P+T+ GA  + P    +   G + V+YH P+E A+I  +D
Sbjct:   89 HQSLTDMVQVLYLLPKANGTLIKKEAFRVPILGWAFHAAGFTPVDRSNPKAARASLEAAVTAMKNGRSFV-IAPEGTRSRTGRLGPFKSGG---------FRLAARAGVPVVPITVTGARNILPKGGKLIYPGTIQVRYHEPLETADIDPQD 230
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1581.4282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSD1_ECTSI3.600e-18184.681-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A6H5L1M9_9PHAE9.600e-16982.41PlsC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YU14_9STRA8.940e-3538.77PlsC domain-containing protein n=2 Tax=Tribonema m... [more]
A0A3P3Y9V1_PLABS2.660e-2235.981-acyl-sn-glycerol-3-phosphate acyltransferase n=2... [more]
A0A7C2SD30_9DELT4.370e-1934.381-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A024UVB1_9STRA4.730e-1935.87PlsC domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A2A4Z296_9FLAO4.760e-1934.291-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A485KN70_9STRA1.580e-1835.33Aste57867_9414 protein n=1 Tax=Aphanomyces stellat... [more]
A0A5C6RRA9_9FLAO3.200e-1835.631-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A6L7KF37_9BACT6.640e-1835.531-acyl-sn-glycerol-3-phosphate acyltransferase n=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1581contigEcto-sp13_S_contig1581:5732..11975 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score520.8
Seed ortholog evalue5.4e-145
Seed eggNOG ortholog2880.D8LSD1
Model size1130
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655,ko:K13509
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04072,ko04975,map00561,map00564,map01100,map01110,map04072,map04975
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0204@1,KOG2848@2759
EC2.3.1.51
Cds size1128
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1581.4282.1prot_Ecto-sp13_S_contig1581.4282.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1581 5733..11975 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462836.1447678-CDS-Ecto-sp13_S_contig1581:5732..58131681462836.1447678-CDS-Ecto-sp13_S_contig1581:5732..5813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1581 5733..5813 -
1681462836.1547868-CDS-Ecto-sp13_S_contig1581:6257..63611681462836.1547868-CDS-Ecto-sp13_S_contig1581:6257..6361Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1581 6258..6361 -
1681462836.162722-CDS-Ecto-sp13_S_contig1581:6784..69201681462836.162722-CDS-Ecto-sp13_S_contig1581:6784..6920Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1581 6785..6920 -
1681462836.1753228-CDS-Ecto-sp13_S_contig1581:7492..75851681462836.1753228-CDS-Ecto-sp13_S_contig1581:7492..7585Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1581 7493..7585 -
1681462836.1865532-CDS-Ecto-sp13_S_contig1581:8049..83391681462836.1865532-CDS-Ecto-sp13_S_contig1581:8049..8339Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1581 8050..8339 -
1681462836.1945047-CDS-Ecto-sp13_S_contig1581:9702..98381681462836.1945047-CDS-Ecto-sp13_S_contig1581:9702..9838Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1581 9703..9838 -
1681462836.202542-CDS-Ecto-sp13_S_contig1581:11687..119751681462836.202542-CDS-Ecto-sp13_S_contig1581:11687..11975Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1581 11688..11975 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1581.4282.1

>prot_Ecto-sp13_S_contig1581.4282.1 ID=prot_Ecto-sp13_S_contig1581.4282.1|Name=mRNA_Ecto-sp13_S_contig1581.4282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=376bp
FRSCGVLQASALQLLPFSCPSVVQRRPETMIDTKLEEIRAAVAECHVGKD
GPTHEARQQENARRIRVFKKLDAYAQDLVQQLAAATASNEDTSRIEARQR
ELDALASTLVVRPVQPKCGPLLEALDLIWRVPAVMLFLLFMGFVVSIPLI
MLTMVEQQIFLALNGGGNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAE
FKGESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWI
MASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLG
PFKKARAGEQNSHFPFHMQEQLQWPVIPVTIHGAYELFPLKWNVNQCGKV
VVKYHRPIEAAEIKSRDGLSQRLRQA
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mRNA from alignment at Ecto-sp13_S_contig1581:5732..11975-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1581.4282.1 ID=mRNA_Ecto-sp13_S_contig1581.4282.1|Name=mRNA_Ecto-sp13_S_contig1581.4282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6244bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1581:5732..11975- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCCGAAGTTGCGGTGTGTTGCAAGCCTCTGCACTGCAGCTGCTGCCGTT
CTCTTGTCCCTCCGTAGTGCAGAGGAGGCCGGAGACAATGATCGACACCA
AGCTGGAAGAGATCAGAGCGGCCGTCGCCGAATGCCACGTCGGCAAGGAC
GGGCCCACCCACGAGGCCAGGCAACAGGAAAACGCTCGGCGAATACGTGT
TTTCAAAAAGCTCGACGCCTACGCCCAGGATCTGGTGCAGCAGCTTGCTG
CCGCTACTGCCTCCAATGAGGACACCTCCAGGATCGAGGTGACCCCTGAC
ACAGCACTTGTTTTGAGTTTGTGGCGCCGAGGTCGAGTAATGTTGTGCGT
CGCAAGCGGTGCTGTGTGAGTAACACAGCACAGCACGCCCCCTCCCAACC
GACGCGGAGCAACTGCCCGTGCTTCGACGTTCCCACAGGGCACCTTGGTG
CCGGCATGCTTACGAAGGGCAGGTCACAGTTCACAGCTACACTTACAGTT
TCGCGTTGGAGAGATGGCTGGGGATAGCATTGTTGTGTTGGCGGTGTTTT
GTATTCGTGTAAGGTTTGCTGTGTTGTGTATCAGGTAATCCATCAGGATC
TCCCGGGCACCATGTATGCATTCGTTGCGATTTTTTTTTTTTTCGGAAAG
CACGAAGGCCAACACCTCACGACCACATCCCACAGAGCACTACTTGCTGC
CGCCTTTCAAATGCTGAAGCACAACACAGTCGTAGTAGCTGCTGTGGTGT
GTTTAAATTTGTATCGAACCTCACCCACAAGGTAAATGGTTGCTTCACCA
GCATCTATCTATGTACCGTCCAAGTCTTGGTGTAAATTTGTGACGGTTAG
CCCTTCGTGACTCCTGTCACCGTCATCCGCCCCGTCACGAAGAAGCGTCT
ATTGTCTGCAACAGCTGGTCTACGTCTCCAACAGGGTAACAACAGGACGA
AAAGCCTGCAGTACCACTTCGGTAGCCCTTGTGAACCACTTGCTCTGCAC
GGATGAGTTGCGATTGCGTCGACGTCTTGAGGGACAAATAAATTTGGCCT
TTTTTTGTCGGGACGCTCGATTCGCAGCGGAAGCGCGCCCTGCTTCTGCT
TCTCCTAGGCAGCAGCAGTTTGACGCTTGTCATTTGTGTGTCATGTATCG
TCAAGTGCCGCGCGAGCCTCCCCCGAAAATCCACCCGGTTGATTGGATCA
CATGCGGTAGTTAGAGCCGAGTACCACGGAACCCGTCAGCAGCGAGCACC
GTGCCATTTTGACCTGTAATATATTTACCTACCGGCAAGACAGGCACAAG
CGTTTCTCGTCCCATCCTTCTTTCCCGTACCGAGTCTTGACTACGGCTTC
ACACCCTTCACATACATTTACATGTCAATCCTGATAAACCCCTCAGCAAC
CACTATTCGCGGTTCGGCACAAACACGTGTAGCGCGAAGGTACGGAAAAT
GGGGCACACTTCACCTCTACAGTACGAACCACCTGCTCCAGTTGGCGCTT
GCGCCGGAAAAAGTCGGAAGGATTGGACCTGATTCCGCGCTCGCTGCCGA
AGTGTTTTGGAGCTGCTCTGGAATCTACTGGAATCTACCTATCGCTCCAG
TTAAAATGTGTGGAGAGCCCTGCCGCGCGAACCTCCTAAAGCGCTTGATA
GGGGTAGGGGCGCCCGCCCCGCTCACCCCATCCTCTCAGCAGAAAGAGAT
AAGAGGAAAAGGGTCGCACCACGGATGATGTGACTTATCGAAGTAAGCTT
GTGGGCTCGAATCTCGCCGGGGTTACCAACCCCCCAAACTCGATGTGTAA
GGCGCGGAGTCGTGAGCAAACGCAACAGATAGGTGTACCCTTTCCTGTGG
CGTTGTTACCACTGAAGGCAAGCACTCTGCGGAGGAATATCGGAACGCCC
TCCTGTGCGACCCGTGCTGTTGTGGCAAACATGATGCACATGTAGACTGG
AGCCCAGAGTACATCAATGGGACAAAACAAGCAAAAAATCAATAGGTTGA
ATTGTAAAATTTTCTGACAACCGACTCGACCCCTCGGTGTTTCTTTTTCG
ACCAAACTCTGCCTCCGAAACGCGAGAGCCGTCTGCTTCCAAACTGACCT
GTCGCCGCTTCGACTGCCGGTGCTGCGCTGCCCAAAGGCCCGCCAACGGG
AGCTGGATGCCCTGGCGTCGACGCTGGTGGTAAGGCCCGTTCAGCCTAAA
TGTGGACCGCTGCTCGAGGCGTTAGACCTCATCTGGCGGGTGCCTGCCGT
CATGCTGTTCCTCCTATTCATGGGTGAGTGAATTTTGACAGAGGACGAAA
AAAGACAACAGGAGAGCGTATTGTACTTTTGATGTGTTGGGATCGAGGTT
TGCGAACCCGTGGGGTCGTTACGCTGCTCCTTCTGGTTGCGCGCGCAAGG
GCTCCTGTGTTGTTTCCCCACCCACGCACGCTCGCCGATTCTTGGATGGC
CGCCCCCGCCCCCGCCGACTCTCGCGTGTTCGCCACTGCTATTCCTCCTG
TTTCCCGGGAAAGTGCGGGAGGGGAATACGAAAGCCTTGGGGAGATGTCC
ACGTAGATGGGCGCCTCGAGCAGACGCTTTATTTATCTTACGAGTCGTCC
TGCTGTGCCGTCCCTGCATCGCCTTTTGGGGTGCTATTCAACGCTGAATT
GGTGGGTGTCGCCATAATAAGGCCGTGTTGAAGAGCTGCCTAGCACGCGC
ACATCGAATGCTGTCGTGGCGCACCTCTCTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTCTTCACATTAAACTCGTGTCAGTTGCTAATCCCAAAATCTA
GCAAAGACTCGGTCCGTGGTCACAAAAATGCGAGAGCCATCAGAAGATCT
AAAGAACACACACACTATTAGCAAGGAAAGGGTACACAACAAGCCAGAGG
TACACCTACAATCCCTGCATCACGTTTACGTGCCCAAAGCTAAACCACAC
GCCCACACACTACATTCGACTACAGCAGCAGCATCACCTCCCCCCTTGTC
CCACATTTTCCCAAAATGAATGTTTGTCGACTACAGCGTACTGCTGGCTG
AAGTCCTGTCTGTACAGTAACAACTCTCTGGGCGGGGTATTTTGTGTCGG
TCTGGGCTTGGAAGCGTTTTCAATCGCGTTGCCCTATCCCGTTGTTGTGG
GTGTGACCCTGATGCAACTCTGTCTCGCCTTGACGCGCGTTGACGTGCGG
GTTGTTGGGCCTGGTACTTGGGCGTCCTGCCCGGTGTTGCCCTACTGTAT
CAGCACAGCAGTTTTCCGGCGACCAAACACACGGCTCGAGGAGTGTCTTA
CGGAGTGTTTTACGGTTTACTCACGCTTAGCTCCCCCGTTATTCGCGCGA
TGAACATCGATCACTCTGCTCTAAAGTAGGTAGAACCAGTTTCCTACGGC
CGGCCGGAGTTGTATGGAATAAAGCTGCATTTCAGGGAGAAGGGGCTGAT
TTTTGGCCGCTGCACATCGTCGACAAGCGTCTCGCCGTCGCATACATCGC
GTCTCAACCCTGCATGGCAGCCGAAACATAACGTAACTATGCCGATGAAT
GAGCGCACCCTGCTGGTTGGCCTTTCTGCGAATACCCCCTCCCACCGGTT
CCGTTTTGCATCAATTTTCCCCGCCTGTTCGTTCAGGATTCGTCGTGTCG
ATACCCCTCATCATGCTCACCATGGTCGAGCAGCAGATCTTTCTCGCACT
CAACGGCGGCGGCAACGGGGGCGCGGGCAACAGCGGCGGCCTCTCGTCCA
TACTCATTCGCCTGGATTGCGCGTGGCTCCTGCTGCTGATGGGGATTCAG
GTCCGGGCCGAGTTCAAGGGCGAGTCGCTGTCGCGCCCGGCGATGCTCCT
ATTCACCCACGTCAGCACCCTCGACGCCGTCGTCATCTTGGGGACGTTGC
CTAGGGCTCTGTGCGCGGTGGTCAAGGTGAAAGAGGAATCATGGGGTGGA
TGCCTACACACCTACACGCTGGTGCTTACTCCTGGGAGAGTTGGTGCCGA
TCGGGGAGAGTCAGCGATTTTTTAAGAAAGGCTGCAGAACAGGAGCTACG
AGAGCATGTGTTGTTGGGCGGCGAAGGCCCCTGTCTCTTTCCCGCTGCCT
TGCTGGCGGACTTGTTTTGTACATCAAAGACATGAGCGCTGTGCTGGCGA
GCACCCTGCTTCCTCTTTCTTCCCCTGGTACTTGTCCTCGCTCACTTTCG
GTACCCACCGTTCACCGTACTGCTGTGTTGTTTTTAGATTCGACGGTTGA
TGGAATCTCTCATGTCCCTCTCCTTCCCTCTGTCTCTCTCCGTCTCCCTC
TGTCTCTCTGTGTCTCTCTCTTACTGTCTGTCTATCTGTCTGTCTGTCTG
TCTCTCTCTCTCTCTCTCTCCGTGGCCTGGCGTGTGGTAGGAGGAGCTGC
TTGCCGTTCCCGTGCTAGGGTGGATCATGGCTTCGCGTGGCGCCATCCCG
ATCAACCGAGGTCATCGTGCCTCCGCAGTGCAGGTTCGTGTATGTGTGTG
TCCGGTGGTTGGCGTGTCCATGCCCGTGCTCGTGTTGGTCGCACTTGGTA
ATGATTGCTCTGAAAAGCCGACCAACGACTAGAATAATCCGACGAAACGC
CGACTTCCTTTTTGCGGCCAGGGTCCCTAAGGGGCGCGCCCAAGCAGAGG
TTAGACGAAAATGATATATTATCCGTTGGCATCAACTCGCTGACCCACTT
GTACCCAAGCTAATGAAGTCCTTTGTCTCCGTGGGGGTGGGAGAGTGAGA
GTACGCGTGCTTTTCTGCCCATCGCGGGCCCCCGATCACCGGACGACATT
CTGCCCTTTTGAAGATTTTGCACATGCGTGAACGTGTGTTTTGGCCATGT
GTTGCAGGTAGGATACGTCCTCGTTGCGCATGCAATAACGTTGACTGATG
CCGTTGTCCCTCCAGTGCCTACCCGCCATCGGAAGCATGTGCAAACACCG
GGAGAGGTCCAACCGCTACTTGAGTATCATCTTTACATTGTTGCCACACT
GCTCAAACTTCACGACTTTGCAACAATTCACTACGACTACCATACGCTGT
TCCAGGCACTAGCGGAGGCGGCCGAGCGAGCGAGAGAGCTCCAGATGTTC
GTAGCGATGGCGCCCGAAGGCACGCGGTCAAAGACGGGCCAGCTGGGACC
CTTCAAGAAGGCGAGAGCGGGAGAGCAAAATAGCCATTTTCGTCCTCTTC
GGCGAGATACGGAAGATTACGCGGCAGTAGCATTGTTGCCTGTGTCGGAG
TCAGAACAGCAGCTGACGTGGAGAGACAGTATTTTCTTTCCATCGTCCAC
GGAAATTAATTCAGCGGGGCGCCCTCGTTCTTCGGAATCGCGGGGCAACG
CTATTGAAAACGAGCGAGCTCGTGAGGAGGACCACCTTGTGGTGGTTCTG
AGCTCCTGCGCTGAACGAACCGCTTGGAAGGAAGCTGTAGCAGGAGCCAT
ATGCTGTTGATGAGTTGTCATGCAGACAACTGTGAATGCCACGCAAGGGC
AACACAGCAGGGTACACCTCGCCTTTACCCCGTATGCTGTCGATCTGTCT
CCTCTGCTGTCGGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGTCCGT
TTTGTTTCAGGGAGCGTTCCACATGCAGGAACAGCTGCAGTGGCCGGTGA
TCCCAGTCACGATTCACGGAGCGTACGAGCTGTTCCCTTTAAAGTGGAAC
GTAAATCAGTGCGGCAAGGTAGGACCTCCAGTCAAGCAAATTTCGTGTGA
TGATCCCCCCCATCGCCGAAAAGTGGAAGCATACTTGTTGAAAGCTTTGT
CAATGTGGCCATCGCCGCCCCCGCCCCCGCCCCTCACCAACCGTCCTACC
TTTTGCGAGTGAAACAGGGCACCGCGCGTCCCAATGCTTAATTGAGCGAA
ACGCAGTTTTTGCGGGGTACGTTTCGAGTTGTTTTGTAGCGCTTCCAGGC
GTATACGGTATTCGTGTGCGTAAAAAAATGGCTGTTACGTCTGTATCACC
CTGTGCCTTTCGTCCTCCCATCTGTGCTTCTATTTCTTGTTGTCCCCCCT
GCTTCTCCTCGTGACGGCTCCCCTCCATTCTTTCGGGAAAAGCTTTTGCG
AGCGCACACCGGTGTGTTCATTTTTCGTGTTAATTTTGTTGGCCTGCTCT
GCCCGCGATCAGGTGGTGGTGAAGTATCACAGACCAATCGAAGCGGCCGA
GATCAAGTCTCGCGACGGGCTATCACAGAGATTGAGGCAGGCGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1581:5732..11975-

>mRNA_Ecto-sp13_S_contig1581.4282.1 ID=mRNA_Ecto-sp13_S_contig1581.4282.1|Name=mRNA_Ecto-sp13_S_contig1581.4282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1581:5732..11975- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCCGAAGTTGCGGTGTGTTGCAAGCCTCTGCACTGCAGCTGCTGCCGTT
CTCTTGTCCCTCCGTAGTGCAGAGGAGGCCGGAGACAATGATCGACACCA
AGCTGGAAGAGATCAGAGCGGCCGTCGCCGAATGCCACGTCGGCAAGGAC
GGGCCCACCCACGAGGCCAGGCAACAGGAAAACGCTCGGCGAATACGTGT
TTTCAAAAAGCTCGACGCCTACGCCCAGGATCTGGTGCAGCAGCTTGCTG
CCGCTACTGCCTCCAATGAGGACACCTCCAGGATCGAGGCCCGCCAACGG
GAGCTGGATGCCCTGGCGTCGACGCTGGTGGTAAGGCCCGTTCAGCCTAA
ATGTGGACCGCTGCTCGAGGCGTTAGACCTCATCTGGCGGGTGCCTGCCG
TCATGCTGTTCCTCCTATTCATGGGATTCGTCGTGTCGATACCCCTCATC
ATGCTCACCATGGTCGAGCAGCAGATCTTTCTCGCACTCAACGGCGGCGG
CAACGGGGGCGCGGGCAACAGCGGCGGCCTCTCGTCCATACTCATTCGCC
TGGATTGCGCGTGGCTCCTGCTGCTGATGGGGATTCAGGTCCGGGCCGAG
TTCAAGGGCGAGTCGCTGTCGCGCCCGGCGATGCTCCTATTCACCCACGT
CAGCACCCTCGACGCCGTCGTCATCTTGGGGACGTTGCCTAGGGCTCTGT
GCGCGGTGGTCAAGGAGGAGCTGCTTGCCGTTCCCGTGCTAGGGTGGATC
ATGGCTTCGCGTGGCGCCATCCCGATCAACCGAGGTCATCGTGCCTCCGC
AGTGCAGGCACTAGCGGAGGCGGCCGAGCGAGCGAGAGAGCTCCAGATGT
TCGTAGCGATGGCGCCCGAAGGCACGCGGTCAAAGACGGGCCAGCTGGGA
CCCTTCAAGAAGGCGAGAGCGGGAGAGCAAAATAGCCATTTTCCGTTCCA
CATGCAGGAACAGCTGCAGTGGCCGGTGATCCCAGTCACGATTCACGGAG
CGTACGAGCTGTTCCCTTTAAAGTGGAACGTAAATCAGTGCGGCAAGGTG
GTGGTGAAGTATCACAGACCAATCGAAGCGGCCGAGATCAAGTCTCGCGA
CGGGCTATCACAGAGATTGAGGCAGGCG
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