prot_Ecto-sp13_S_contig15808.4280.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15808.4280.1
Unique Nameprot_Ecto-sp13_S_contig15808.4280.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length882
Homology
BLAST of mRNA_Ecto-sp13_S_contig15808.4280.1 vs. uniprot
Match: A0A6H5JJJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ8_9PHAE)

HSP 1 Score: 1003 bits (2594), Expect = 0.000e+0
Identity = 797/902 (88.36%), Postives = 808/902 (89.58%), Query Frame = 0
Query:    1 MSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX------HLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLIDPAYSSSFDSDVDHHGGGEVATEGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSYGGPDGGGSYSMASGAAAAAPGAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMGSSFASPKAGGGAADAAAAASRLPAVGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEGKAAMGEDELGSLGMEKIPRSSVSSLSPRARQHNEWRARYGSSQSELKFAEGXXXXXXXXXXXXXLAASSRMASGMSDARLTSASTLSSFNGESIISAMPSADARARSSGAARASPDSASAAGGGGVFGRSDTGSDASADAAAGHGDPSGSKGLASALDRRVKSAAVAPSPTHSRSGRAETGATKSERTVDEDGDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDARARDAEXXXXXXXXXXXXXXX-------------TRTRAPQIMAGTRMSSSLSLSRSSSEASSLPSPVSVPSTSFQSHHAYMSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXAGVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGPPDGGVSNRWSTGTSAVELKSALKKETSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXX-SSRLGGLRQ 882
            MSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAE   XXXXXXXXXXXXXXXXXXXXXXXXX      HL ES A VEVDS+GASMSDAASTSLASSQSNTSESPLID AYSSSFDSDVD  GGGEVA EGS LVGGRN RGSGGVLS+ SETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGG STVYLARAGADGPRGVPWSYGGPDG GSYSMAS AA          AESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSM SSFASPKAG       AAASRLP VGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXX VARSLSQED RTEA SEG AAMGEDELGSLG+EKIP+SSVSSLSP ARQHNEWRARYGSSQSELKF EG XXXXX       LAASSRMASGMSDARLTSASTLSSFNGESI+SAMPSADARA+SSGA RASPD AS AGGGGVFG+SDTGSDASADAAAGHGD SGSKGLASALDRRVKSAAVAPSP  SRSGRA TGATKSE TVDE GDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXX             TRTRAPQ+ AGTRMSSSLSLSRSSSEASSLPSPV VPSTSFQSHHA+ SGGGGXXXXXXXXXXXXXXXXXXXXXXXXX GVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGP  GGVSNRWSTGTSAVELKSALKKE SFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXX S+R+GGLRQ
Sbjct:  419 MSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEAARXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXHLAESGAIVEVDSHGASMSDAASTSLASSQSNTSESPLIDQAYSSSFDSDVDQRGGGEVAAEGSPLVGGRNSRGSGGVLSIASETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGVSTVYLARAGADGPRGVPWSYGGPDGRGSYSMASDAAXXXXXXXXXXAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMASSFASPKAGXXXXXXXAAASRLPPVGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXXKVARSLSQEDPRTEAGSEGTAAMGEDELGSLGVEKIPKSSVSSLSPLARQHNEWRARYGSSQSELKFPEGGXXXXXRGS----LAASSRMASGMSDARLTSASTLSSFNGESIVSAMPSADARAQSSGATRASPDPASPAGGGGVFGQSDTGSDASADAAAGHGDASGSKGLASALDRRVKSAAVAPSPKRSRSGRAGTGATKSESTVDEGGDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRAPQMTAGTRMSSSLSLSRSSSEASSLPSPVFVPSTSFQSHHAFTSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGPTGGGVSNRWSTGTSAVELKSALKKEPSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXXSNRIGGLRQ 1316          
BLAST of mRNA_Ecto-sp13_S_contig15808.4280.1 vs. uniprot
Match: D8LSN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN4_ECTSI)

HSP 1 Score: 920 bits (2377), Expect = 1.280e-313
Identity = 720/883 (81.54%), Postives = 725/883 (82.11%), Query Frame = 0
Query:    1 MSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLIDPAYSSSFDSDVDHHGGGEVATEGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSYGGPDGGGSYSMASGAAAAAPGAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMGSSFASPKAGGGAADAAAAASRLPAVGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEGKAAMGEDELGSLGMEKIPRSSVSSLSPRARQHNEWRARYGSSQSELKFAEGXXXXXXXXXXXXXLAASSRMASGMSDARLTSASTLSSFNGESIISAMPSADARARSSGAARASPDSASAAGGGGVFGRSDTGSDASADAAAGHGDPSGSKGLASALDRRVKSAAVAPSPTHSRSGRAETGATKSERTVDEDGDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDARARDAEXXXXXXXXXXXXXXXTRTRAPQIMAGTRMSSSLSLSRSSSEASSLPSPVSVPSTSFQSHHAYMSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXAGVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGPPDGG-VSNRWSTGTSAVELKSALKKETSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXSSRLGGLRQ 882
            MSDISSELPH KTDNPLFSS+SNRD           XXXXXXXXXXXXXXXXXXXXXXXXXX  HLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLID AYSSSFDSDVDHHGGGEVA EGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSY GPDGGGSYSMAS  AA A GAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSM SSFASPKAGGGAA    AASRLP VGLRKGISNESLKAIKI SGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEG AA GEDELGSLGMEKIPRSSVSSLSP ARQHNEWRARYGSSQSELKFAEGXXXXXXXXXX    AASSRMASG SDARLTSASTLSSFNGESI+SAMPS DARARSSGA RASPD ASAAGGG VFG+SD GSDASADAAAGHGD S SKGLASALDRRVKSAAVAPSPTHSRSGRA TGATKSE TVDEDGDEFYDATSTA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                        GVLD TRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXX DVGPP GG VSNRWSTGTSAVELKSALKKE+SFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXSSR+GGLRQ
Sbjct:  659 MSDISSELPH-KTDNPLFSSNSNRD---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGHLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLIDQAYSSSFDSDVDHHGGGEVAAEGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSYSGPDGGGSYSMASADAAGAAGAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMASSFASPKAGGGAA----AASRLPPVGLRKGISNESLKAIKIASGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEGTAATGEDELGSLGMEKIPRSSVSSLSPLARQHNEWRARYGSSQSELKFAEGXXXXXXXXXX----AASSRMASGTSDARLTSASTLSSFNGESIVSAMPSEDARARSSGATRASPDPASAAGGGSVFGQSDNGSDASADAAAGHGDASISKGLASALDRRVKSAAVAPSPTHSRSGRAGTGATKSESTVDEDGDEFYDATSTADGAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------------------GVLDDTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXXDVGPPGGGGVSNRWSTGTSAVELKSALKKESSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXSSRMGGLRQ 1425          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15808.4280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJJ8_9PHAE0.000e+088.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSN4_ECTSI1.280e-31381.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15808contigEcto-sp13_S_contig15808:318..3948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15808.4280.1mRNA_Ecto-sp13_S_contig15808.4280.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15808 318..3960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15808.4280.1 ID=prot_Ecto-sp13_S_contig15808.4280.1|Name=mRNA_Ecto-sp13_S_contig15808.4280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=882bp
MSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEAARARGTGSRSMSG
GGSGSGSGSRSGSGHLTESDATVEVDSYGASMSDAASTSLASSQSNTSES
PLIDPAYSSSFDSDVDHHGGGEVATEGSSLVGGRNPRGSGGVLSVTSETS
SRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGV
PWSYGGPDGGGSYSMASGAAAAAPGAEDDDAESVFRPPSPGSVSRPLQPL
LAQQSPMSCVSGFTSKSNSFAMSSRSSSMGSSFASPKAGGGAADAAAAAS
RLPAVGLRKGISNESLKAIKITSGGGDAEREAVREAVRRQRRKVARSLSQ
EDRRTEASSEGKAAMGEDELGSLGMEKIPRSSVSSLSPRARQHNEWRARY
GSSQSELKFAEGGGGGGGGGGGGGSLAASSRMASGMSDARLTSASTLSSF
NGESIISAMPSADARARSSGAARASPDSASAAGGGGVFGRSDTGSDASAD
AAAGHGDPSGSKGLASALDRRVKSAAVAPSPTHSRSGRAETGATKSERTV
DEDGDEFYDATSTAGGAGGGGGDGGGSVVAAAAEAAAARVTAAAASRTGG
GSGGSASLRHAGGTAAAAATAATDARARDAETAAVVAAAEAAAAAATRTR
APQIMAGTRMSSSLSLSRSSSEASSLPSPVSVPSTSFQSHHAYMSGGGGS
GGGGSSSGASSARAASAAAAAVAAAGVLDGTRGLDQASIVAAEECRDRAI
EAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQA
GAAAAAAAAAADVGPPDGGVSNRWSTGTSAVELKSALKKETSFRSTAEKP
RSVSFAYDSDGDDDDDYDSDGDGSSRLGGLRQ
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