mRNA_Ecto-sp13_S_contig15808.4280.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15808.4280.1
Unique NamemRNA_Ecto-sp13_S_contig15808.4280.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15808.4280.1 vs. uniprot
Match: A0A6H5JJJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ8_9PHAE)

HSP 1 Score: 1009 bits (2610), Expect = 0.000e+0
Identity = 800/906 (88.30%), Postives = 812/906 (89.62%), Query Frame = 1 
Query:    1 EVGDMSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX------HLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLIDPAYSSSFDSDVDHHGGGEVATEGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSYGGPDGGGSYSMASGAAAAAPGAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMGSSFASPKAGGGAADAAAAASRLPAVGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEGKAAMGEDELGSLGMEKIPRSSVSSLSPRARQHNEWRARYGSSQSELKFAEGXXXXXXXXXXXXXLAASSRMASGMSDARLTSASTLSSFNGESIISAMPSADARARSSGAARASPDSASAAGGGGVFGRSDTGSDASADAAAGHGDPSGSKGLASALDRRVKSAAVAPSPTHSRSGRAETGATKSERTVDEDGDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDARARDAEXXXXXXXXXXXXXXX-------------TRTRAPQIMAGTRMSSSLSLSRSSSEASSLPSPVSVPSTSFQSHHAYMSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXAGVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGPPDGGVSNRWSTGTSAVELKSALKKETSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXX-SSRLGGLRQ 2658
            E+GDMSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAE   XXXXXXXXXXXXXXXXXXXXXXXXX      HL ES A VEVDS+GASMSDAASTSLASSQSNTSESPLID AYSSSFDSDVD  GGGEVA EGS LVGGRN RGSGGVLS+ SETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGG STVYLARAGADGPRGVPWSYGGPDG GSYSMAS AA          AESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSM SSFASPKAG       AAASRLP VGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXX VARSLSQED RTEA SEG AAMGEDELGSLG+EKIP+SSVSSLSP ARQHNEWRARYGSSQSELKF EG XXXXX       LAASSRMASGMSDARLTSASTLSSFNGESI+SAMPSADARA+SSGA RASPD AS AGGGGVFG+SDTGSDASADAAAGHGD SGSKGLASALDRRVKSAAVAPSP  SRSGRA TGATKSE TVDE GDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXX             TRTRAPQ+ AGTRMSSSLSLSRSSSEASSLPSPV VPSTSFQSHHA+ SGGGGXXXXXXXXXXXXXXXXXXXXXXXXX GVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGP  GGVSNRWSTGTSAVELKSALKKE SFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXX S+R+GGLRQ
Sbjct:  415 ELGDMSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEAARXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXHLAESGAIVEVDSHGASMSDAASTSLASSQSNTSESPLIDQAYSSSFDSDVDQRGGGEVAAEGSPLVGGRNSRGSGGVLSIASETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGVSTVYLARAGADGPRGVPWSYGGPDGRGSYSMASDAAXXXXXXXXXXAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMASSFASPKAGXXXXXXXAAASRLPPVGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXXKVARSLSQEDPRTEAGSEGTAAMGEDELGSLGVEKIPKSSVSSLSPLARQHNEWRARYGSSQSELKFPEGGXXXXXRGS----LAASSRMASGMSDARLTSASTLSSFNGESIVSAMPSADARAQSSGATRASPDPASPAGGGGVFGQSDTGSDASADAAAGHGDASGSKGLASALDRRVKSAAVAPSPKRSRSGRAGTGATKSESTVDEGGDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRAPQMTAGTRMSSSLSLSRSSSEASSLPSPVFVPSTSFQSHHAFTSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGPTGGGVSNRWSTGTSAVELKSALKKEPSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXXSNRIGGLRQ 1316
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15808.4280.1 vs. uniprot
Match: D8LSN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN4_ECTSI)

HSP 1 Score: 927 bits (2396), Expect = 1.530e-316
Identity = 724/887 (81.62%), Postives = 729/887 (82.19%), Query Frame = 1 
Query:    1 EVGDMSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLIDPAYSSSFDSDVDHHGGGEVATEGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSYGGPDGGGSYSMASGAAAAAPGAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMGSSFASPKAGGGAADAAAAASRLPAVGLRKGISNESLKAIKITSGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEGKAAMGEDELGSLGMEKIPRSSVSSLSPRARQHNEWRARYGSSQSELKFAEGXXXXXXXXXXXXXLAASSRMASGMSDARLTSASTLSSFNGESIISAMPSADARARSSGAARASPDSASAAGGGGVFGRSDTGSDASADAAAGHGDPSGSKGLASALDRRVKSAAVAPSPTHSRSGRAETGATKSERTVDEDGDEFYDATSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDARARDAEXXXXXXXXXXXXXXXTRTRAPQIMAGTRMSSSLSLSRSSSEASSLPSPVSVPSTSFQSHHAYMSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXAGVLDGTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXADVGPPDGG-VSNRWSTGTSAVELKSALKKETSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXSSRLGGLRQ 2658
            EVGDMSDISSELPH KTDNPLFSS+SNRD           XXXXXXXXXXXXXXXXXXXXXXXXXX  HLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLID AYSSSFDSDVDHHGGGEVA EGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSY GPDGGGSYSMAS  AA A GAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSM SSFASPKAGGGAA    AASRLP VGLRKGISNESLKAIKI SGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEG AA GEDELGSLGMEKIPRSSVSSLSP ARQHNEWRARYGSSQSELKFAEGXXXXXXXXXX    AASSRMASG SDARLTSASTLSSFNGESI+SAMPS DARARSSGA RASPD ASAAGGG VFG+SD GSDASADAAAGHGD S SKGLASALDRRVKSAAVAPSPTHSRSGRA TGATKSE TVDEDGDEFYDATSTA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                        GVLD TRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXX DVGPP GG VSNRWSTGTSAVELKSALKKE+SFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXSSR+GGLRQ
Sbjct:  655 EVGDMSDISSELPH-KTDNPLFSSNSNRD---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGHLTESDATVEVDSYGASMSDAASTSLASSQSNTSESPLIDQAYSSSFDSDVDHHGGGEVAAEGSSLVGGRNPRGSGGVLSVTSETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGVPWSYSGPDGGGSYSMASADAAGAAGAEDDDAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFTSKSNSFAMSSRSSSMASSFASPKAGGGAA----AASRLPPVGLRKGISNESLKAIKIASGGGDAEREAVXXXXXXXXXXVARSLSQEDRRTEASSEGTAATGEDELGSLGMEKIPRSSVSSLSPLARQHNEWRARYGSSQSELKFAEGXXXXXXXXXX----AASSRMASGTSDARLTSASTLSSFNGESIVSAMPSEDARARSSGATRASPDPASAAGGGSVFGQSDNGSDASADAAAGHGDASISKGLASALDRRVKSAAVAPSPTHSRSGRAGTGATKSESTVDEDGDEFYDATSTADGAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------------------GVLDDTRGLDQASIVAAEECRDRAIEAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQAGAXXXXXXXXXDVGPPGGGGVSNRWSTGTSAVELKSALKKESSFRSTAEKPRSVSFAYDSXXXXXXXXXXXXXXSSRMGGLRQ 1425
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15808.4280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJJ8_9PHAE0.000e+088.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSN4_ECTSI1.530e-31681.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15808contigEcto-sp13_S_contig15808:318..3960 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2658
Hectar predicted targeting categoryother localisation
Exons4
Cds size2646
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462836.0826478-CDS-Ecto-sp13_S_contig15808:317..11371681462836.0826478-CDS-Ecto-sp13_S_contig15808:317..1137Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15808 318..1137 -
1681462836.0933573-CDS-Ecto-sp13_S_contig15808:1179..16181681462836.0933573-CDS-Ecto-sp13_S_contig15808:1179..1618Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15808 1180..1618 -
1681462836.1044075-CDS-Ecto-sp13_S_contig15808:2017..24531681462836.1044075-CDS-Ecto-sp13_S_contig15808:2017..2453Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15808 2018..2453 -
1681462836.1124735-CDS-Ecto-sp13_S_contig15808:2997..39481681462836.1124735-CDS-Ecto-sp13_S_contig15808:2997..3948Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15808 2998..3948 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462836.1201725-UTR-Ecto-sp13_S_contig15808:3948..39601681462836.1201725-UTR-Ecto-sp13_S_contig15808:3948..3960Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15808 3949..3960 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15808.4280.1prot_Ecto-sp13_S_contig15808.4280.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15808 318..3948 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15808.4280.1

>prot_Ecto-sp13_S_contig15808.4280.1 ID=prot_Ecto-sp13_S_contig15808.4280.1|Name=mRNA_Ecto-sp13_S_contig15808.4280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=882bp
MSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEAARARGTGSRSMSG
GGSGSGSGSRSGSGHLTESDATVEVDSYGASMSDAASTSLASSQSNTSES
PLIDPAYSSSFDSDVDHHGGGEVATEGSSLVGGRNPRGSGGVLSVTSETS
SRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGASTVYLARAGADGPRGV
PWSYGGPDGGGSYSMASGAAAAAPGAEDDDAESVFRPPSPGSVSRPLQPL
LAQQSPMSCVSGFTSKSNSFAMSSRSSSMGSSFASPKAGGGAADAAAAAS
RLPAVGLRKGISNESLKAIKITSGGGDAEREAVREAVRRQRRKVARSLSQ
EDRRTEASSEGKAAMGEDELGSLGMEKIPRSSVSSLSPRARQHNEWRARY
GSSQSELKFAEGGGGGGGGGGGGGSLAASSRMASGMSDARLTSASTLSSF
NGESIISAMPSADARARSSGAARASPDSASAAGGGGVFGRSDTGSDASAD
AAAGHGDPSGSKGLASALDRRVKSAAVAPSPTHSRSGRAETGATKSERTV
DEDGDEFYDATSTAGGAGGGGGDGGGSVVAAAAEAAAARVTAAAASRTGG
GSGGSASLRHAGGTAAAAATAATDARARDAETAAVVAAAEAAAAAATRTR
APQIMAGTRMSSSLSLSRSSSEASSLPSPVSVPSTSFQSHHAYMSGGGGS
GGGGSSSGASSARAASAAAAAVAAAGVLDGTRGLDQASIVAAEECRDRAI
EAGTAAAGAAVASGEVTTEAQLMAAGAVAAAKATKGRAVPDDVRRKAIQA
GAAAAAAAAAADVGPPDGGVSNRWSTGTSAVELKSALKKETSFRSTAEKP
RSVSFAYDSDGDDDDDYDSDGDGSSRLGGLRQ
back to top

mRNA from alignment at Ecto-sp13_S_contig15808:318..3960-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15808.4280.1 ID=mRNA_Ecto-sp13_S_contig15808.4280.1|Name=mRNA_Ecto-sp13_S_contig15808.4280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3643bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15808:318..3960- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGTGGGGGACATGTCGGACATCTCGTCGGAGCTCCCTCACGACAAGAC
CGACAACCCCCTCTTCTCGAGCGATTCGAACCGCGACGGCGGTGGCTCTT
CGCCGACTTCGGTCGCCGAGGCGGCCCGCGCCCGCGGCACCGGCAGCAGG
AGCATGAGCGGCGGCGGCAGCGGCAGTGGCAGCGGCAGCCGCAGCGGCAG
CGGCCACCTGACGGAGAGTGATGCCACCGTTGAGGTGGACTCCTACGGCG
CGAGCATGAGCGACGCCGCGTCAACGTCGCTGGCCTCTTCGCAGTCCAAC
ACGAGCGAGTCGCCGCTGATCGACCCGGCGTACTCGTCCAGCTTCGACTC
CGACGTCGACCACCACGGGGGCGGAGAGGTCGCCACCGAAGGCTCGTCGC
TGGTTGGCGGTAGGAACCCGCGCGGCAGCGGCGGCGTGCTCAGCGTCACC
TCGGAAACGTCGTCCAGGATGCCGTTCGGCCTGTCGCCGGTCGCCGAGAG
GACCGACAGCAGGGGCGAGTCGCCGGGCCTGACCACGAACAGCAGCAGCA
CGACGGGCGGGGCGAGCACGGTCTACCTCGCCCGCGCAGGCGCCGACGGG
CCCAGAGGCGTGCCGTGGTCCTACGGCGGCCCCGACGGCGGCGGGAGTTA
CTCGATGGCAAGCGGCGCCGCCGCCGCAGCCCCCGGCGCGGAGGACGATG
ACGCCGAGAGCGTGTTCAGGCCGCCGTCTCCTGGGTCGGTGTCGAGGCCG
CTGCAGCCGCTGCTCGCGCAGCAGTCGCCCATGTCCTGCGTGTCGGGCTT
CACCTCCAAGTCCAACTCGTTCGCCATGTCGTCGCGCTCGAGCTCCATGG
GGAGCTCCTTCGCCAGCCCCAAGGCCGGCGGCGGCGCGGCCGACGCCGCC
GCTGCCGCCTCGCGGCTGCCGGCGGTGGGCCTGCGCAAGGGCATCTCGAA
CGAGAGCCTGAAAGTGAGTCGTCGTCGTTTTGTCGGAGATGTGTAACGTG
TACGTGAGTGTGCGTGCGTTGTGTACTATGCCGAAATATCCCGCAGTAGG
CCATTCCATTCGACGGCGCCCGTTGAAAGAGAGACACACTCAGAGGTGTG
TGTGTGAGAGAGAAAGAGAGACCCAACAGACGTTTCTCACGTGGATACAG
AAACATACATGAATCGCCGCTTGTTGTGCTCTCGCTGTTGCAGGACGGGG
TCGATTGACGGCTGGCTCCTGAGGCGGCTTCCGTTTGTTTTCGGAGTGTT
CGGTGCCTTGCCTCGTTTTGGCAGAGTCCGCCAAATAGCCCCAACACTCG
CCTCTTAATCTAAATAGCGCACCCCTCCCTTCTCAGCTGGTGTTGTGTTT
TCTGTTTTCCTAACCAAAAGCACAACGGAATCGTCTCTTCCATCGGAATG
AACAAGGAGTCCGGGACATGTCAGCAATGAATTTATTCATGTGTGTCCGA
AGTTTCGTTGTTCTTGTTTTGTCGGTCTCCTCTTCCCCCTTCCCTCCTCC
ATTGTAGGCCATCAAGATCACCTCCGGTGGCGGCGACGCCGAGCGCGAGG
CCGTCCGGGAGGCCGTCCGCAGGCAGCGGCGGAAGGTTGCGCGGTCGCTG
TCCCAGGAGGACCGCAGGACCGAGGCCAGCAGCGAGGGAAAAGCGGCGAT
GGGCGAGGACGAGCTCGGAAGCCTCGGCATGGAGAAAATCCCCAGGAGTT
CGGTGTCCTCGCTAAGCCCGCGGGCGCGGCAGCACAACGAGTGGCGGGCG
CGGTACGGGTCTTCCCAGTCGGAGCTCAAGTTTGCCGAAGGAGGGGGAGG
CGGCGGCGGCGGCGGTGGCGGTGGCGGTAGCTTGGCCGCGTCGTCGCGGA
TGGCCAGCGGCATGAGCGATGCGCGGCTGACCAGCGCCAGCACCTTGTCG
AGCTTCAACGGGGAGAGCATCATTAGCGCCATGCCCTCGGCAGGTGTGGA
AGGTTGGGCTCGCGCGTTTTTTTCTCAGGATGTTACCTTTATCGTTTCTT
GCTTTGGTGTTGCAGTCGACGCTTTGGCTCATGCCGCCTCTGAAGTCCAC
ACTCGAAAGAGGTGCCGACGGGTCCACAGAGCGGCCTTGCATCCAATTTC
ACGAAGTTTGCCGGGCACAGATTGACCGCATGAACGTGCGGACGCACGCA
CAGCGGAGAGCGTTTTTGCGTGTGACAGTGTTTGGCGTTCCTGCTCTCTC
ACGAGAACATTTAAATGTATTATTTTCGTTGTTCAGAGCCGGATGTTGTA
CTGCAGTCGATGCGATAGTTTCATTAAAGAACAACCAATCTCCTCCCAAC
CCTGCTCTTAAATCCGAACACCCTCCCTTACCTCGCGCACAGATGCCCGC
GCTCGAAGCTCAGGAGCAGCCAGGGCCTCCCCGGATTCCGCGAGTGCGGC
CGGCGGCGGAGGCGTTTTCGGGCGGAGTGACACCGGCTCGGACGCCTCCG
CCGATGCCGCCGCCGGCCACGGCGATCCCAGCGGCTCCAAGGGTCTGGCG
AGTGCCCTGGACCGTCGCGTCAAGTCCGCGGCCGTCGCGCCTAGCCCGAC
GCACTCCAGGTCCGGCCGCGCGGAGACGGGGGCCACTAAGAGCGAGAGAA
CGGTCGACGAGGACGGGGACGAGTTCTACGACGCCACGTCTACTGCCGGC
GGCGCCGGGGGCGGCGGCGGCGACGGCGGCGGCAGCGTGGTCGCTGCGGC
GGCGGAGGCGGCGGCCGCTCGAGTAACGGCCGCCGCTGCTTCGAGGACCG
GAGGAGGAAGCGGCGGCAGCGCGAGCCTGCGGTTCTCTTCGCGGCGGCGG
ACAGCTGGGCGCGACAGCAGCAGGCATGCTGGGGGCACCGCCGCCGCGGC
CGCCACCGCCGCTACCGATGCCAGAGCAAGAGACGCGGAGACGGCGGCGG
TGGTGGCCGCGGCCGAAGCGGCGGCGGCGGCGGCTACCAGAACCAGGGCC
CCGCAGATTATGGCCGGGACGCGCATGTCGTCGTCGCTGTCGCTCTCCAG
GTCTTCGTCTGAGGCTAGCTCCTTGCCCTCGCCTGTCTCCGTCCCGTCCA
CCTCGTTCCAGTCGCACCATGCGTACATGTCCGGCGGTGGTGGCAGCGGC
GGCGGCGGCAGCAGCAGCGGGGCCTCCTCGGCAAGGGCCGCCTCGGCGGC
CGCCGCGGCCGTCGCCGCCGCGGGGGTGCTGGACGGCACCCGGGGGCTCG
ACCAGGCGTCGATCGTGGCGGCAGAGGAATGCCGGGACCGCGCGATCGAG
GCGGGAACGGCGGCGGCGGGGGCGGCGGTAGCGTCCGGGGAGGTGACCAC
GGAGGCACAGCTCATGGCGGCGGGCGCGGTGGCAGCGGCGAAGGCCACCA
AGGGGCGCGCGGTGCCCGACGACGTGCGCCGGAAGGCCATCCAGGCGGGA
GCGGCGGCGGCCGCGGCGGCGGCCGCGGCGGACGTGGGGCCGCCCGACGG
CGGCGTCAGCAACCGCTGGAGCACGGGCACCAGCGCGGTGGAGCTCAAGT
CCGCCCTCAAGAAGGAAACCTCGTTCCGGAGCACGGCGGAGAAGCCGCGA
AGCGTGTCGTTCGCGTACGACAGTGACGGCGACGACGACGACGACTACGA
CAGCGACGGCGACGGCAGCAGCAGGTTGGGAGGGCTTCGACAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15808:318..3960-

>mRNA_Ecto-sp13_S_contig15808.4280.1 ID=mRNA_Ecto-sp13_S_contig15808.4280.1|Name=mRNA_Ecto-sp13_S_contig15808.4280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2646bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15808:318..3960- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGACATCTCGTCGGAGCTCCCTCACGACAAGACCGACAACCCCCT
CTTCTCGAGCGATTCGAACCGCGACGGCGGTGGCTCTTCGCCGACTTCGG
TCGCCGAGGCGGCCCGCGCCCGCGGCACCGGCAGCAGGAGCATGAGCGGC
GGCGGCAGCGGCAGTGGCAGCGGCAGCCGCAGCGGCAGCGGCCACCTGAC
GGAGAGTGATGCCACCGTTGAGGTGGACTCCTACGGCGCGAGCATGAGCG
ACGCCGCGTCAACGTCGCTGGCCTCTTCGCAGTCCAACACGAGCGAGTCG
CCGCTGATCGACCCGGCGTACTCGTCCAGCTTCGACTCCGACGTCGACCA
CCACGGGGGCGGAGAGGTCGCCACCGAAGGCTCGTCGCTGGTTGGCGGTA
GGAACCCGCGCGGCAGCGGCGGCGTGCTCAGCGTCACCTCGGAAACGTCG
TCCAGGATGCCGTTCGGCCTGTCGCCGGTCGCCGAGAGGACCGACAGCAG
GGGCGAGTCGCCGGGCCTGACCACGAACAGCAGCAGCACGACGGGCGGGG
CGAGCACGGTCTACCTCGCCCGCGCAGGCGCCGACGGGCCCAGAGGCGTG
CCGTGGTCCTACGGCGGCCCCGACGGCGGCGGGAGTTACTCGATGGCAAG
CGGCGCCGCCGCCGCAGCCCCCGGCGCGGAGGACGATGACGCCGAGAGCG
TGTTCAGGCCGCCGTCTCCTGGGTCGGTGTCGAGGCCGCTGCAGCCGCTG
CTCGCGCAGCAGTCGCCCATGTCCTGCGTGTCGGGCTTCACCTCCAAGTC
CAACTCGTTCGCCATGTCGTCGCGCTCGAGCTCCATGGGGAGCTCCTTCG
CCAGCCCCAAGGCCGGCGGCGGCGCGGCCGACGCCGCCGCTGCCGCCTCG
CGGCTGCCGGCGGTGGGCCTGCGCAAGGGCATCTCGAACGAGAGCCTGAA
AGCCATCAAGATCACCTCCGGTGGCGGCGACGCCGAGCGCGAGGCCGTCC
GGGAGGCCGTCCGCAGGCAGCGGCGGAAGGTTGCGCGGTCGCTGTCCCAG
GAGGACCGCAGGACCGAGGCCAGCAGCGAGGGAAAAGCGGCGATGGGCGA
GGACGAGCTCGGAAGCCTCGGCATGGAGAAAATCCCCAGGAGTTCGGTGT
CCTCGCTAAGCCCGCGGGCGCGGCAGCACAACGAGTGGCGGGCGCGGTAC
GGGTCTTCCCAGTCGGAGCTCAAGTTTGCCGAAGGAGGGGGAGGCGGCGG
CGGCGGCGGTGGCGGTGGCGGTAGCTTGGCCGCGTCGTCGCGGATGGCCA
GCGGCATGAGCGATGCGCGGCTGACCAGCGCCAGCACCTTGTCGAGCTTC
AACGGGGAGAGCATCATTAGCGCCATGCCCTCGGCAGATGCCCGCGCTCG
AAGCTCAGGAGCAGCCAGGGCCTCCCCGGATTCCGCGAGTGCGGCCGGCG
GCGGAGGCGTTTTCGGGCGGAGTGACACCGGCTCGGACGCCTCCGCCGAT
GCCGCCGCCGGCCACGGCGATCCCAGCGGCTCCAAGGGTCTGGCGAGTGC
CCTGGACCGTCGCGTCAAGTCCGCGGCCGTCGCGCCTAGCCCGACGCACT
CCAGGTCCGGCCGCGCGGAGACGGGGGCCACTAAGAGCGAGAGAACGGTC
GACGAGGACGGGGACGAGTTCTACGACGCCACGTCTACTGCCGGCGGCGC
CGGGGGCGGCGGCGGCGACGGCGGCGGCAGCGTGGTCGCTGCGGCGGCGG
AGGCGGCGGCCGCTCGAGTAACGGCCGCCGCTGCTTCGAGGACCGGAGGA
GGAAGCGGCGGCAGCGCGAGCCTGCGGCATGCTGGGGGCACCGCCGCCGC
GGCCGCCACCGCCGCTACCGATGCCAGAGCAAGAGACGCGGAGACGGCGG
CGGTGGTGGCCGCGGCCGAAGCGGCGGCGGCGGCGGCTACCAGAACCAGG
GCCCCGCAGATTATGGCCGGGACGCGCATGTCGTCGTCGCTGTCGCTCTC
CAGGTCTTCGTCTGAGGCTAGCTCCTTGCCCTCGCCTGTCTCCGTCCCGT
CCACCTCGTTCCAGTCGCACCATGCGTACATGTCCGGCGGTGGTGGCAGC
GGCGGCGGCGGCAGCAGCAGCGGGGCCTCCTCGGCAAGGGCCGCCTCGGC
GGCCGCCGCGGCCGTCGCCGCCGCGGGGGTGCTGGACGGCACCCGGGGGC
TCGACCAGGCGTCGATCGTGGCGGCAGAGGAATGCCGGGACCGCGCGATC
GAGGCGGGAACGGCGGCGGCGGGGGCGGCGGTAGCGTCCGGGGAGGTGAC
CACGGAGGCACAGCTCATGGCGGCGGGCGCGGTGGCAGCGGCGAAGGCCA
CCAAGGGGCGCGCGGTGCCCGACGACGTGCGCCGGAAGGCCATCCAGGCG
GGAGCGGCGGCGGCCGCGGCGGCGGCCGCGGCGGACGTGGGGCCGCCCGA
CGGCGGCGTCAGCAACCGCTGGAGCACGGGCACCAGCGCGGTGGAGCTCA
AGTCCGCCCTCAAGAAGGAAACCTCGTTCCGGAGCACGGCGGAGAAGCCG
CGAAGCGTGTCGTTCGCGTACGACAGTGACGGCGACGACGACGACGACTA
CGACAGCGACGGCGACGGCAGCAGCAGGTTGGGAGGGCTTCGACAG
back to top