mRNA_Ecto-sp13_S_contig15801.4275.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: D8LP49_ECTSI (EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP49_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 1.180e-161 Identity = 244/337 (72.40%), Postives = 273/337 (81.01%), Query Frame = 1
Query: 1 MEASTIRVDNTTKMGSVMDTIRFVLACDSSTANTTLRRLIQATDGLGSRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLLENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISRPDMVVTDSVPTATPLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREVM 1011
M+ +TIR D TK GSVMDTIR VL CDSS ANT RL+QA LGS RC R K+NGKGNETPVADAKTLIEIVWLLPGKKAH+FRRQSSEKVCRLLGGDLSLV+EIEARH +LQSTE+GR TQ FLL GREE A+++F+GMP FKY+ DR +AKRMI+QQL ALKR+RVD+L+ SY+++QDIGV LDGRTLIELRD+VTI+SR + V D+V ATPLLQD NT THEL +AQRG+ETGIV VSSKIGIRVPQ+L G+VGKLMRQLYIKKYALP NWNAFVKRQTL NGRPVMENC FSRDEDIIEQAIREVM
Sbjct: 7 MDGATIRADKQTKKGSVMDTIRMVLRCDSSNANTAFGRLLQAHPELGS--------------RCTRSKLNGKGNETPVADAKTLIEIVWLLPGKKAHSFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRETQEFLLHGREE--AVETFDGMPAGFKYLSETDRAQVAKRMIDQQLKAGDQALKRKRVDDLVHSYRAIQDIGVRLDGRTLIELRDSVTILSRQNTVEDDAVAVATPLLQDSNTSTHELASAQRGKETGIVVVSSKIGIRVPQNLCGKVGKLMRQLYIKKYALPGNWNAFVKRQTLINGRPVMENCFFSRDEDIIEQAIREVM 327
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: A0A6H5JW74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW74_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 2.700e-131 Identity = 215/338 (63.61%), Postives = 267/338 (78.99%), Query Frame = 1
Query: 1 MEASTIRVDNTTKMGSVMDTIRFVLACDSSTANTTLRRLIQATDGLGSRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLLENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISRPDMVVTDSVPTATPLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREVMQ 1014
M +TIRVD ++GSV+DTIR VL DSS ANT+L RLI A + LG+ RC ++++NGKG TPVADAKTLIEIVWLLPGKKA FRRQSSEKVCRLLGGDLSLV+EIEARH +LQSTE+GRATQ FLL REE A+++F+GMP F+Y+ +DR AK+M+E L + VALKR+RVD+++QSY++LQD+GV LDGRTLIELRDNVTI+SR D++V ++V A PLL D TPTHEL A QRG+ETGIV VSSKIGIRVPQ++SG VGK+M+Q+YI+KY L +++ F +RQTLFNGRP++EN +F RDEDIIE+AIR VM+
Sbjct: 904 MHGATIRVDKNEQVGSVIDTIRMVLGGDSSAANTSLNRLILANEELGT--------------RCTQLRINGKGKFTPVADAKTLIEIVWLLPGKKAREFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRATQEFLLGEREE--AVETFDGMPAGFRYLPVEDRAQFAKQMLELNLEMSKVALKRKRVDDMVQSYRALQDLGVLLDGRTLIELRDNVTILSRQDVMVNNAVAIAAPLLHDSTTPTHELGADQRGKETGIVVVSSKIGIRVPQNMSGTVGKMMKQMYIRKYELAPDFSGFARRQTLFNGRPILENLYFERDEDIIEEAIRAVMK 1225
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: UPI0000161E55 (EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E55) HSP 1 Score: 372 bits (956), Expect = 2.260e-127 Identity = 189/224 (84.38%), Postives = 210/224 (93.75%), Query Frame = 1
Query: 343 LSLVAEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLLENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISRPDMVVTDSVPTATPLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREVMQ 1014
+SLV+EIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQL E+TVALKRQRVDNLIQSYKSL+DIGVNLDGRTLIEL DNVTI+SR D+VV+D+VPT TPLLQD +TPTHELDAAQRGRETGIV VS+KIG+RVPQHL G VGKLM++LYIKKY L N+ AF+KR+T+FNGRP +EN +++RDEDIIEQAIREVMQ
Sbjct: 1 MSLVSEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLQESTVALKRQRVDNLIQSYKSLRDIGVNLDGRTLIELCDNVTILSRQDLVVSDAVPTPTPLLQDSSTPTHELDAAQRGRETGIVVVSAKIGLRVPQHLCGTVGKLMKKLYIKKYRLSSNFKAFIKRETIFNGRPGLENTYYARDEDIIEQAIREVMQ 224
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: B5LWG1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG1_9PHYC) HSP 1 Score: 311 bits (798), Expect = 1.400e-101 Identity = 172/350 (49.14%), Postives = 230/350 (65.71%), Query Frame = 1
Query: 16 IRVDNTTKMGSVMDTIRFVLACDSSTANTTLRRLIQATDGLGSRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLLD-GREEVEA--------IDSFEGMPPAFKYIDAKDRGDLAKRMIEQQL-------LENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISRPDMVVTDSVPTATPLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREVMQM 1017
IR D TTK GSV+D IR VL C SS ANT L L LG+ ++NGKG TPVADAKTL+EI++LLPG+KA FRR+S+EKVCRL+GGD+SLV EIE R +L+ST EGRATQ+FLL+ G E + + +EGMP F ++D D+ +AK +++Q L KRQR ++++ YK+L DIGV LD RT IE+RDNV+++++ D+ + S T D TPTH L A +RG ETGIV V++K+G+RVP +SG +GKLM++LY KKY L V+W+ F KRQTLF+GRP+ ENC+++RDEDIIE+AI+ M+M
Sbjct: 13 IRADATTKKGSVIDVIRSVLGCSSSAANTNLSNLKTRFSDLGN--------------NIAHAQINGKGKSTPVADAKTLVEIIFLLPGQKACKFRRKSAEKVCRLMGGDMSLVVEIEQRCTALESTPEGRATQAFLLNPGSSENSSSAPCASAQLKKYEGMPAGFSFLDPSDQCKVAKEVVQQALDGRKXXXXXXXXXXKRQRCEDMVGRYKTLMDIGVKLDDRTKIEIRDNVSLLTKRDLALEGSQDTEICAPIDPTTPTHTLCAGERGHETGIVVVAAKMGVRVPPAMSGAIGKLMKKLYKKKYGLSVDWDDFPKRQTLFHGRPINENCYYARDEDIIEEAIKTKMKM 348
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: B5LWM3_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM3_9PHYC) HSP 1 Score: 306 bits (783), Expect = 1.310e-99 Identity = 165/331 (49.85%), Postives = 227/331 (68.58%), Query Frame = 1
Query: 10 STIRVDNTTKMGSVMDTIRFVLACDSSTANTTLRRLIQATDGLGSRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLLENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISRPDMVVTDSVPTATPLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIR 1002
+TIR+DN T+ GSV+D IR VL CD+S+ANT RRL D L SR C +++NGKG TPVA+AKTL+EI++ LPGK A FRR+S+ ++CRLLGGD +LV EIE R L+ST +GR TQ+FLL G + D F GMP F+Y++ R +A ++ +ALKRQR++++I SY SL+ +GV LD RT++E+RDNV+++++ + + + + T L+ D TPTH L +RG E+GIV V+SK+G+RVP +SG +GKLM+ LY KKY LP +WN FVKRQTL+ GRPVMENC++ RDEDII +AI+
Sbjct: 11 ATIRIDNATQKGSVIDVIRMVLRCDASSANTAFRRL--KDDMLKSRAEFGAA--------CSHLRINGKGRLTPVANAKTLVEIIFSLPGKLAREFRRKSASQICRLLGGDPTLVFEIEQRRAELESTPKGRVTQAFLL-GESRHDTDDDFTGMPVGFRYLEESQRRAVAGEVV-------ALALKRQRIEDMIGSYASLRSLGVELDPRTMVEIRDNVSLLTKRKLSIEEREDSTTRLV-DPKTPTHVLGREERGNESGIVVVASKMGVRVPPSMSGPIGKLMKILYKKKYDLPNDWNDFVKRQTLYLGRPVMENCYYERDEDIITEAIK 322
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: Q6XM54_9PHYC (FirrV-1-A33 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM54_9PHYC) HSP 1 Score: 248 bits (632), Expect = 3.360e-75 Identity = 147/337 (43.62%), Postives = 212/337 (62.91%), Query Frame = 1
Query: 16 IRVDNTTKMGSVMDTIRFVLACDSST-ANTTLRRLIQATDG-LGSR-PXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLLENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISRPDMVVTDSVPTATPLL--QDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREVM 1011
IRVD ++MGSV+D I+ + S A TL LI D +G++ R ++++NG+G TPVADAKTLI I+WLLPG+ FR QS+E + R+LGGDL L EI+ + LQ T EGRA Q F+ ++ + +D FE + P+ + A+ + I+Q+ LK++ + ++I Y+SL++I V +D RT +E+RD V+I++R + + PLL +D +TPTH LDA +RG+ET IV VS+K+ +RVP LSG+VGKLMR+ YI KY LP NWN F+KRQT+ +GRP +EN ++ RD DIIE+AIREV+
Sbjct: 122 IRVDEESRMGSVIDVIKLICPEKSEFHAYKTLSNLIDDDDKCIGNKFKSDDSTIPLRLSERVKKIQINGRGRVTPVADAKTLIYIIWLLPGRAVAHFRAQSAEIIARVLGGDLRLAQEIQQQCAKLQETPEGRAFQDFMAPDAKK-QKMDMFEFLGPSKRVEIAEQFYAEKLKAIQQERQAKEQELKKKSITDIIDVYQSLKNIDVEIDDRTKVEIRDKVSILTR--QMEGQGSHASPPLLLCEDPSTPTHVLDAERRGQETNIVVVSAKMNVRVPPALSGKVGKLMRKKYINKYKLPTNWNDFIKRQTILHGRPCLENTYYERDADIIEEAIREVV 455
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: Q6XLT8_9PHYC (FirrV-1-K1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT8_9PHYC) HSP 1 Score: 230 bits (587), Expect = 3.870e-69 Identity = 152/378 (40.21%), Postives = 208/378 (55.03%), Query Frame = 1
Query: 16 IRVDNTTKMGSVMDTIRFVLACDSST-ANTTLRRLI-------QATDGLG-SRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPP--AFKYI------DAKDRGDLAKRMIEQQLLENTVALKR---------------------QRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISR---PDMVVTDSVPTAT-----PLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREVM 1011
IRVD T + S +D IR + + A+ L+R+I + T+ + SR R +K+NGKG+ TPVAD TL+EI+WL+PG FR S+E + R LGGDL+ EI H LQ T EGR Q F+L R++ E +P + YI D K++ ++ K++I QQL V + ++ LI +Y+SL+D+GV LD RT +ELRDNV+II++ D VV P T D + PTHEL +RG E+GIV VS IG+RVPQ +SG VGK M++LY++KY L WN FVKR+TLF GRP+ EN +F+RD+DII QAIREV+
Sbjct: 27 IRVDEVTGLASAIDVIRLICPDQNEKYASHILKRIIDQDADKEKVTNTVTLSRSEHSATIKPPFSERVKSIKINGKGHTTPVADVATLVEIIWLIPGSAVRQFRAHSAEALVRALGGDLAHAREIAEHHIKLQETPEGREFQDFMLPDRKKARV----ESVPDTRSENYILLSLVTDPKEKSEMVKKIINQQLKNRDVXXXXXXXXXXXXXXXXXXXXXXXXGKSINRLIGTYQSLKDLGVTLDERTFMELRDNVSIINKVHTKDRVV----PAVTGGGGIDRTVDPSVPTHELGPDERGEESGIVPVSIHIGVRVPQGMSGVVGKRMKKLYVEKYKLESGWNDFVKRRTLFRGRPITENVYFARDDDIIAQAIREVV 396
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC) HSP 1 Score: 216 bits (551), Expect = 4.880e-64 Identity = 145/357 (40.62%), Postives = 207/357 (57.98%), Query Frame = 1
Query: 1 MEASTIRVDNTTKMGSVMDTIRFVLACDSSTANTTLRRLIQATDGLGSRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLL-------DGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLLENTVALK---RQRVDNLIQ-SYKSLQDIGVNLDGRTLIELR----------DNVTIISRPDMVVTDSVPTATPLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREV 1008
M+ STIRVD TK+GSV+DTIR VL CDSS ANT+L RL+ + GLG + ++K+NG+G TPVADAKTLIEIVWLLPG++AHAFR Q K+CRLLGGD SLV+EIEARH +L TEEGRATQ F L D ++V+ + S E P FK A+++ A M+ + ++ V + + +++++ Q + + + + G + LR D+ +IS V D++ +AT L TP E + RG ET I ++K+GI V + G +GK + + Y K+Y + N KR T + G+P ENC++SRD D++++AIR V
Sbjct: 25 MDGSTIRVDKNTKLGSVIDTIRMVLECDSSNANTSLGRLVLSHPGLGE--------------KYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEE-PSWFKNATAEEKRAFASTMVNKAIVSEEVEMYDFCKAKLESVGQFTTRDMIEFGDRVRDAQRRALRAGNMMTSTPVDDTVVISAVARPVDDTIDSATGL--PLATP--ECSESVRGVETSICNEAAKLGICVGEK-GGEIGKELIRRYTKRYGVEAGLN-IPKRPTTYRGKPFNENCYWSRDADLVQEAIRIV 360
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: Q6XLT7_9PHYC (FirrV-1-L1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT7_9PHYC) HSP 1 Score: 202 bits (514), Expect = 1.620e-58 Identity = 129/351 (36.75%), Postives = 183/351 (52.14%), Query Frame = 1
Query: 16 IRVDNTTKMGSVMDTIRFVLACDSST---ANTTLRRLIQ-------ATDGLGSRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYI-----DAKDRGDLAKRMIEQQLLENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISR---PDMVVTDSVPTAT-PLLQDYNTPTHELDAAQRGRETGIVAVSSKIGIRVPQHLSGRVGKLMRQLYIKKYALPVNWNAFVKRQTLFNGRPVMENCHFSRDEDIIEQAIREVM 1011
IRVD T + S +D IR + C A TL+++I+ + S P R + +NG+GN TPVAD TL+EI+WL+PG FR S+E + R LGGDL+ EI H LQ T EGR Q F+L R++ ++S G + D K+R ++ K+++E ++ + ELRDNV I+++ D VV + + + D + PTHEL +RG E+GIV VS IG+RVPQ +SG VGK M++LY+ KY L WN F+KR+TLF GRP+ EN +++RD+DII QAIREV+
Sbjct: 27 IRVDEVTGLASAIDVIRLI--CPEKNGWYAANTLQKIIEQDSQETVVPETTVSSPDHSAMIKPPLSERVKYITINGRGNTTPVADVATLVEIIWLIPGSAVRQFRAHSAEALVRALGGDLAHAREIAEHHIKLQETSEGREFQDFMLPDRKKAR-VESVPGTCSETCILLGLVTDPKERSEMVKKLLETKVKDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDNVAIMNKVHTKDRVVPAVTGSGSIDRIVDPSVPTHELGPDERGEESGIVPVSIDIGVRVPQGMSGVVGKRMKKLYVAKYKLESGWNDFIKRRTLFRGRPISENVYYARDDDIIAQAIREVV 374
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Match: B5LWF8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWF8_9PHYC) HSP 1 Score: 189 bits (479), Expect = 5.310e-55 Identity = 110/244 (45.08%), Postives = 157/244 (64.34%), Query Frame = 1
Query: 1 MEASTIRVDNTTKMGSVMDTIRFVLACDSSTANTTLRRLIQATDGLGSRPXXXXXXXXXXXXRCPRMKMNGKGNETPVADAKTLIEIVWLLPGKKAHAFRRQSSEKVCRLLGGDLSLVAEIEARHNSLQSTEEGRATQSFLL-DG---REEVEA-----IDSFEGMPPAFKYIDAKDRGDLAKRMIEQQLLENTVALKRQRVDNLIQSYKSLQDIGVNLDGRTLIELRDNVTIISRPDMVVTDS 705
ME+S+IRVD +K GSV+DT++ VL C SS+ NT LRRL L R+++NGKG TPVADAK L+++V LLPG+KA FRR+S++ VCRLLGGD+SLV EIE R +LQ + EGR Q LL DG R V + ID +EGMP F+++DA D+ +AK +++Q L ALKR+R ++++ KSL DIGV+LD +T ++RDN++++++ D+ + S
Sbjct: 8 MESSSIRVDKASKKGSVIDTVKMVLGCTSSSGNTNLRRLTTRFPDL--------------CVDITRLRINGKGMATPVADAKLLVQVVLLLPGQKAIEFRRKSADVVCRLLGGDMSLVKEIEQRCATLQRSPEGRVIQDILLGDGDADRSVVTSSTSSQIDKYEGMPAGFRFLDASDQHRVAKEVVKQALDCKKQALKRRRCEDMVDQCKSLSDIGVDLDNQTKKDIRDNLSLLTKGDLALEGS 237 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15801.4275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15801.4275.1 >prot_Ecto-sp13_S_contig15801.4275.1 ID=prot_Ecto-sp13_S_contig15801.4275.1|Name=mRNA_Ecto-sp13_S_contig15801.4275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=340bp MEASTIRVDNTTKMGSVMDTIRFVLACDSSTANTTLRRLIQATDGLGSRPback to top mRNA from alignment at Ecto-sp13_S_contig15801:233..1252- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15801.4275.1 ID=mRNA_Ecto-sp13_S_contig15801.4275.1|Name=mRNA_Ecto-sp13_S_contig15801.4275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15801:233..1252- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15801:233..1252- >mRNA_Ecto-sp13_S_contig15801.4275.1 ID=mRNA_Ecto-sp13_S_contig15801.4275.1|Name=mRNA_Ecto-sp13_S_contig15801.4275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15801:233..1252- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |