prot_Ecto-sp13_S_contig15797.4268.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15797.4268.1
Unique Nameprot_Ecto-sp13_S_contig15797.4268.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: D7FR23_ECTSI (KRR-R motif-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR23_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 2.010e-63
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEKKVRN 108
            GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLK ENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEKK ++
Sbjct:  176 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEKKAKS 283          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A836CN64_9STRA (KRR1 small subunit processome component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN64_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.800e-46
Identity = 79/104 (75.96%), Postives = 88/104 (84.62%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEK 104
            GLKQ RKV+ DCMNN+HPVYNIKTLMIRRELAKDP L GE+W RFLP F+K+NV RKKP  +REK+ YTPFPPAQ P KVD QLESGE+FLNE QRK + RAEK
Sbjct:  194 GLKQARKVIVDCMNNIHPVYNIKTLMIRRELAKDPALAGEDWSRFLPSFNKRNVPRKKPRSVREKRAYTPFPPAQLPSKVDLQLESGEYFLNEAQRKGRARAEK 297          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A7S2DCQ6_9STRA (KRR-R motif-containing protein 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCQ6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.100e-43
Identity = 78/106 (73.58%), Postives = 91/106 (85.85%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIRE--KKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEK 104
            G+KQVRKVV DCMNN+HPVYNIK LMI+RELAKDP L GENW+RFLP+F KK V RKKP  +R+  K+ YTPFPPAQTP KVD QLESGE+FL+E QRKA++R+EK
Sbjct:  181 GIKQVRKVVEDCMNNIHPVYNIKILMIKRELAKDPALAGENWDRFLPKFAKKTVDRKKPFKVRDTAKRTYTPFPPAQTPSKVDLQLESGEYFLSETQRKARRRSEK 286          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A6G0XML2_9STRA (KRR1 small subunit processome component n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XML2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.500e-43
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEK 104
            GL+ VRK+V DC  NVHP+YNIKTLMI+RELAKDP L GENW+RFLP F KKNV+ KKP V+REKK YTPFPPA TP K+D+++ESGE+F+ E +RK  K+A+K
Sbjct:  185 GLRHVRKIVEDCFQNVHPIYNIKTLMIKRELAKDPKLSGENWDRFLPTFKKKNVQTKKPHVVREKKAYTPFPPAPTPSKIDKEIESGEYFMKEHERKEMKKAKK 288          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A1V9ZKL3_9STRA (KRR1 small subunit processome component n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZKL3_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.120e-43
Identity = 72/104 (69.23%), Postives = 89/104 (85.58%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEK 104
            GL+ VRK+V DC +NVHP+YNIKTLMI+RELAKDP L+GENWERFLP F KKN++ KKP V+REK+ YTPFPPAQ P KVD+++ESGE+F+ E +RKA K+A K
Sbjct:  181 GLRHVRKIVEDCFHNVHPIYNIKTLMIKRELAKDPALQGENWERFLPVFKKKNIQTKKPHVVREKREYTPFPPAQLPSKVDKEIESGEYFMKEHERKAMKKAAK 284          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A024TMB1_9STRA (KRR1 small subunit processome component n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMB1_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.230e-43
Identity = 71/104 (68.27%), Postives = 88/104 (84.62%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEK 104
            GL+ VRK+V DC  NVHP+YNIKTLMI+REL+KDP L GENW+RFLP F KKNV+ KKP V+REKK YTPFPPA TP K+D+++ESGE+F+ E +RKA K+A+K
Sbjct:  184 GLRHVRKIVEDCFQNVHPIYNIKTLMIKRELSKDPKLAGENWDRFLPVFKKKNVQTKKPHVVREKKAYTPFPPAPTPSKIDKEIESGEYFMKEHERKAMKQAKK 287          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A7S2W9F2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9F2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.100e-43
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNE 93
            GLKQVRKVV DCM N+HPVYNIK LMI+RELAKDP L  ENWERFLP+F +K V RKKP  +REKK YTPFPP Q P KVD QLESGE+FL+E
Sbjct:    7 GLKQVRKVVEDCMRNIHPVYNIKILMIKRELAKDPELANENWERFLPKFARKTVARKKPVNVREKKSYTPFPPQQQPSKVDLQLESGEYFLDE 99          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A1V9ZXJ5_9STRA (KRR1 small subunit processome component n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXJ5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 4.490e-43
Identity = 71/108 (65.74%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEKKVRN 108
            GL+ +RK+V DC +N+HP+YNIKTLMI+RELAKDP L+GENW+RFLP F KKNV+ KKP V+REKK YTPFPPAQ P K+D+++ESGE+F+   +RKA K+AEK+  N
Sbjct:  187 GLRHIRKIVEDCFHNIHPIYNIKTLMIKRELAKDPALQGENWDRFLPVFKKKNVQTKKPHVVREKKEYTPFPPAQMPSKIDKEIESGEYFMKAHERKAMKKAEKQAIN 294          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: B8C0X8_THAPS (KRR1 small subunit processome component n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0X8_THAPS)

HSP 1 Score: 153 bits (387), Expect = 7.540e-43
Identity = 74/106 (69.81%), Postives = 88/106 (83.02%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEKKV 106
            G+KQ R V+ DCMNN+HPVYNIK LMI REL +DP LK E+WERFLP F KKNVKR+KP  +++KK YTPFPPAQ P K+D QLESGE+FL+ER+RKAKK  EKK+
Sbjct:  204 GIKQTRNVILDCMNNIHPVYNIKRLMIMRELERDPKLKEESWERFLPTFKKKNVKRRKPHQLKKKKSYTPFPPAQQPSKIDLQLESGEYFLSERERKAKKLGEKKI 309          
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Match: A0A485KS03_9STRA (KRR1 small subunit processome component n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KS03_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.620e-42
Identity = 71/108 (65.74%), Postives = 88/108 (81.48%), Query Frame = 0
Query:    1 GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEKKVRN 108
            GL+ VR +V DC  NVHP+YNIKTLMI+REL KDP L+GENW+RFLP F KKNV  KKP V+REK+VYTPFPPA  P K+D+++ESGE+F+ E++RKA K+AEK   N
Sbjct:  192 GLRHVRSIVEDCFKNVHPIYNIKTLMIKRELQKDPKLQGENWDRFLPVFKKKNVATKKPHVVREKRVYTPFPPAPVPSKIDKEIESGEYFMKEQERKAMKKAEKAAAN 299          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15797.4268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR23_ECTSI2.010e-6396.30KRR-R motif-containing protein 1 n=1 Tax=Ectocarpu... [more]
A0A836CN64_9STRA1.800e-4675.96KRR1 small subunit processome component n=1 Tax=Tr... [more]
A0A7S2DCQ6_9STRA1.100e-4373.58KRR-R motif-containing protein 1 n=1 Tax=Dictyocha... [more]
A0A6G0XML2_9STRA2.500e-4368.27KRR1 small subunit processome component n=1 Tax=Ap... [more]
A0A1V9ZKL3_9STRA3.120e-4369.23KRR1 small subunit processome component n=3 Tax=Sa... [more]
A0A024TMB1_9STRA3.230e-4368.27KRR1 small subunit processome component n=2 Tax=Ap... [more]
A0A7S2W9F2_9STRA4.100e-4375.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1V9ZXJ5_9STRA4.490e-4365.74KRR1 small subunit processome component n=1 Tax=Th... [more]
B8C0X8_THAPS7.540e-4369.81KRR1 small subunit processome component n=1 Tax=Th... [more]
A0A485KS03_9STRA1.620e-4265.74KRR1 small subunit processome component n=1 Tax=Ap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..108
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..44
e-value: 3.4E-16
score: 60.9
IPR024166Ribosomal RNA assembly KRR1PANTHERPTHR12581HIV-1 REV BINDING PROTEIN 2, 3coord: 1..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15797contigEcto-sp13_S_contig15797:329..1572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15797.4268.1mRNA_Ecto-sp13_S_contig15797.4268.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15797 329..1572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15797.4268.1 ID=prot_Ecto-sp13_S_contig15797.4268.1|Name=mRNA_Ecto-sp13_S_contig15797.4268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
GLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKGENWERFLPQFH
KKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKK
RAEKKVRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR024166rRNA_assembly_KRR1