prot_Ecto-sp13_S_contig1579.4263.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1579.4263.1
Unique Nameprot_Ecto-sp13_S_contig1579.4263.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length74
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1579.4263.1 vs. uniprot
Match: D8LGJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ8_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 3.070e-15
Identity = 43/49 (87.76%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:   14 MKGGAAQ-SSQISANALPDVGGAAWAFVVVVGALTRVASSSRSFC--GW 59
            MKGGAAQ SSQISANALPDVGGAAWAFVVVVGALTRV SSSR F   GW
Sbjct:    1 MKGGAAQQSSQISANALPDVGGAAWAFVVVVGALTRVVSSSRFFLAGGW 49
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1579.4263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGJ8_ECTSI3.070e-1587.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1579contigEcto-sp13_S_contig1579:15575..15796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1579.4263.1mRNA_Ecto-sp13_S_contig1579.4263.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1579 15575..15797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1579.4263.1 ID=prot_Ecto-sp13_S_contig1579.4263.1|Name=mRNA_Ecto-sp13_S_contig1579.4263.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp
GASAGLFGWAVLQMKGGAAQSSQISANALPDVGGAAWAFVVVVGALTRVA
SSSRSFCGWVGGAGMHLAMERRPP
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