prot_Ecto-sp13_S_contig15789.4260.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15789.4260.1
Unique Nameprot_Ecto-sp13_S_contig15789.4260.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length290
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15789.4260.1 vs. uniprot
Match: D7G6T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T4_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 3.110e-92
Identity = 157/173 (90.75%), Postives = 162/173 (93.64%), Query Frame = 0 
Query:  108 IHRDAAKQGVMVDVRRFRLAAEVDGQPSTYLTGTDLIRAWEQQDDGKTAVRREAIDGPYEMYTAAEVADKVHEDERANEAPAEQDARRYFAEGFVVPKPXXXXXXXXXKQALDDGNFSVKCDRWSPEGTPDDPKFNIRKSEFVHNVENHPAAMLPLVQYIDGFNANGMQTKAS 280
            I+ DAAK GVMVDVRRFRLAAEVDGQ S+YL GTDLIRAWEQQDDGKTAVRRE IDGP EMYTAAEVADKVHEDE ANEAPAEQDARRYFAEGFVVPKPXXXXXXXXXK+ALDDGN SV CDRWSPEGT DDPKF+IRKSEF+HNVENHPAAMLPLVQYIDGFNANGMQTK S
Sbjct:  295 IYWDAAKLGVMVDVRRFRLAAEVDGQSSSYLAGTDLIRAWEQQDDGKTAVRREVIDGPCEMYTAAEVADKVHEDEGANEAPAEQDARRYFAEGFVVPKPXXXXXXXXXKRALDDGNVSVTCDRWSPEGTSDDPKFSIRKSEFMHNVENHPAAMLPLVQYIDGFNANGMQTKNS 467
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15789.4260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6T4_ECTSI3.110e-9290.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15789contigEcto-sp13_S_contig15789:5..874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15789.4260.1mRNA_Ecto-sp13_S_contig15789.4260.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15789 5..874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15789.4260.1 ID=prot_Ecto-sp13_S_contig15789.4260.1|Name=mRNA_Ecto-sp13_S_contig15789.4260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp
QPSRRQTAEICAVDGGNVVQSRRQAAEPRRDCRRGSRVDTHLLCAGRESR
WNEGRQPERRACKIDASLRVRWNNGWHGRQEESVRQRHRHVYFGRRRRCP
TVPDPSNIHRDAAKQGVMVDVRRFRLAAEVDGQPSTYLTGTDLIRAWEQQ
DDGKTAVRREAIDGPYEMYTAAEVADKVHEDERANEAPAEQDARRYFAEG
FVVPKPPPEGGRRRRKQALDDGNFSVKCDRWSPEGTPDDPKFNIRKSEFV
HNVENHPAAMLPLVQYIDGFNANGMQTKASSWKRCKCMW*
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