prot_Ecto-sp13_S_contig15788.4259.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15788.4259.1
Unique Nameprot_Ecto-sp13_S_contig15788.4259.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15788.4259.1 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 2.000e-5
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 0 
Query:    1 ELVTVGELKWLAELENSTYKKVFLAK 26
            ELVTVGE+KWLAELENST +KVFLAK
Sbjct:  430 ELVTVGEVKWLAELENSTDQKVFLAK 455
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15788.4259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD72_9PHAE2.000e-588.46Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15788contigEcto-sp13_S_contig15788:371..1019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15788.4259.1mRNA_Ecto-sp13_S_contig15788.4259.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15788 369..1019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15788.4259.1 ID=prot_Ecto-sp13_S_contig15788.4259.1|Name=mRNA_Ecto-sp13_S_contig15788.4259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
ELVTVGELKWLAELENSTYKKVFLAKWKPCHASRDVGNEERCGSTGPQAD
N
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