mRNA_Ecto-sp13_S_contig15783.4255.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI) HSP 1 Score: 815 bits (2105), Expect = 7.790e-297 Identity = 384/418 (91.87%), Postives = 394/418 (94.26%), Query Frame = 1
Query: 1 MYKSYLSMCAGPLLLAFAVKAADYNAPAPTPSPTYARPVSRYSGPTPTYGSESSDSL---DANAGPNDDYTSPATTPSPTTEIYPDLSESYDAEVTPEPVMDTPXXXPDMETTSGPTEYYIETTEDGDMEKMPTSDSGPKEEQDKEEEPLPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDNEDVPDYDFRTCSHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG 1245
M KS+LSMCAGPLL A AV AADYN PAPTPSPTY+RPVSRYSGPTPTY +SSDS DANAGPNDDYTSPAT PTTEIYPDL+ESY+AEVTPEPVMDTP PDMETTSGPTEYY+ETTEDGDMEK+PTSD G KEE EP+PMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKY+LDEPKGEMEYNLVRECDNEDVPDYDFRTC+HNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG
Sbjct: 1 MNKSFLSMCAGPLLFALAVNAADYNEPAPTPSPTYSRPVSRYSGPTPTYWPDSSDSXXXXDANAGPNDDYTSPATXXXPTTEIYPDLNESYEAEVTPEPVMDTPAPSPDMETTSGPTEYYVETTEDGDMEKVPTSDGGSKEEXXXXXEPIPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG 418
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI) HSP 1 Score: 704 bits (1818), Expect = 5.230e-249 Identity = 337/415 (81.20%), Postives = 346/415 (83.37%), Query Frame = 1
Query: 1 MYKSYLSMCAGPLLLAFAVKAADYNAPAPTPSPTYARPVSRYSGPTPTYGSESSDSLDANAGPNDDYTSPATTPSPTTEIYPDLSESYDAEVTPEPVMDTPXXXPDMETTSGPTEYYIETTEDGDMEKMPTSDSGPKEEQDKEEEPLPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDNEDVPDYDFRTCSHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG 1245
M KS LSMCAGPLLLA A K AGPNDDY SPATTPSPTTEIYPDL E Y+AEVTPEPV+DTP PDMETTSGPTEYY+ETTEDGDMEKMP SD G ++ P+PMENPEDGMSCSTYDEDVDVA ILPETCEWNTYMCCWTGHDGS GMYGN DVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWAD ADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACS+FG EGIEPC NSLRS YK RLDEPKGE+EYNLVRECDNEDVPDYDFRTC+HNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG
Sbjct: 1 MNKSVLSMCAGPLLLALAAK----------------------------------------AGPNDDYNSPATTPSPTTEIYPDLGEYYEAEVTPEPVVDTPAPSPDMETTSGPTEYYVETTEDGDMEKMPMSDGGSEKXXXXXXXPIPMENPEDGMSCSTYDEDVDVANILPETCEWNTYMCCWTGHDGSGGMYGNTDVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSRFGREGIEPCGANSLRSHYKNRLDEPKGELEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG 375
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 1.410e-166 Identity = 216/302 (71.52%), Postives = 250/302 (82.78%), Query Frame = 1
Query: 340 TEYYIETTEDGDMEKMPTSDSGPKEEQDKEEEPLPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDNEDVPDYDFRTCSHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG 1245
T+YY+E T+ G E+ T SG + EEE PMENP+DG SCSTYDEDV+VA +L TCEW+TYMCCWTG DG+ GM N+DVCRVLDYPEEGD E+PRD EG VYCHGFAW + AD+D+HILPLYHYV NV RT++GG+YGNVEG P CGCIE+MP VS + CS++ EGI C +N L SQY+ RL EP G M+ NLVR CDNEDVPDYD+ +CSHNTYMCCWTENDG+GMADNTDVCRV+DYPSMGET E+PG+SEGEVHCHGFVWPEDATDKYIHLL+QFVQ+FDHRDRRGY+G
Sbjct: 107 TDYYVEATDGG--EETITMGSGT--DDGGEEEGAPMENPDDGASCSTYDEDVEVAKLLDSTCEWDTYMCCWTGSDGADGMTANSDVCRVLDYPEEGDSFEMPRDSEGSVYCHGFAWVEGADVDTHILPLYHYVKNVGRTEEGGFYGNVEGAPECGCIEEMPQVSYSECSRYSWEGIVGCGNNGLLSQYRGRLGEPYGPMDDNLVRTCDNEDVPDYDYGSCSHNTYMCCWTENDGEGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHLLSQFVQNFDHRDRRGYYG 404
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: A0A6H5JT81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT81_9PHAE) HSP 1 Score: 476 bits (1226), Expect = 1.700e-166 Identity = 210/215 (97.67%), Postives = 213/215 (99.07%), Query Frame = 1
Query: 493 VDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDNEDVPDYDFRTCSHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEV 1137
VDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVL+YPEEGDVLELPRDDEGPVYCHGFAWAD ADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKY+LDEPKGEMEYNLVRECDNEDVPDYDFRTC+HNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPG SEGEV
Sbjct: 4 VDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLNYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGGSEGEV 218
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 1.540e-155 Identity = 230/416 (55.29%), Postives = 274/416 (65.87%), Query Frame = 1
Query: 1 MYKSYLSMCAGPLLLAFAVKAAD-YNAPAPTPSPTYARPVSRYSGPTPTYGSESSDSLDANAGPNDDYTSPATTPSPTTEIYPDLSESYDAEVTPEPVMDTPXXXPDMETTSGPTEYYIETTEDGDMEKMPTSDSGPKEEQDKEEEPLPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDNEDVPDYDFRTCSHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG 1245
M+ S+LS+CAGPLLLA A A D +APAPTP YSG D++ G SPAT+P+ T + D S+ Y V PEP T +DG++E +EE +P+EN DG CSTYDEDV VA +LPE CEWNTYMCCWTG+DG GM N DVCRV DYPEEG+ LE PRD EG VYCHGF WAD AD++++ILPLYH V N RT++GGYYGNVEG P CGC+E+MPVVS + CS+F G+GI C ++ L S Y R+DEP G +E NLVR CDN DVPD+DFR C +TYMCCWTEND +G+ DNTDVCR+ DYPS GET EYPG+SEG+VHCHG VWPEDATDKYIHLLAQ+VQ FDH +GY+G
Sbjct: 1 MHTSFLSVCAGPLLLALAANACDDSSAPAPTPE---------YSG-------------DSSKGTTPSPVSPATSPTDTVVAFAD-SDDY---VEPEP-----------------------TDDDGEVE---------------DEEGVPLENDGDGEVCSTYDEDVHVAYLLPEMCEWNTYMCCWTGNDGPDGMTSNTDVCRVWDYPEEGNSLEFPRDSEGSVYCHGFGWADGADVNTNILPLYHSVINTGRTEEGGYYGNVEGAPQCGCLEEMPVVSFSECSRFDGDGITDCGEHGLYSNYVSRIDEPNGPLEDNLVRICDNYDVPDFDFRECDSHTYMCCWTENDAKGVLDNTDVCRIHDYPSAGETLEYPGDSEGDVHCHGIVWPEDATDKYIHLLAQYVQTFDHIGNKGYYG 352
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: A0A6H5L319_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L319_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 8.150e-134 Identity = 185/314 (58.92%), Postives = 219/314 (69.75%), Query Frame = 1
Query: 442 PMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYY-----GNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDNEDVPDYDFRTCSHNTYMCCWTENDGQGMADNT----------------------------------------DVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFGK 1248
PMENP+DG SCSTY+E V+VA +L TCEW+ YMCCWTG+DG+ GM N+DVCRVLDYPEEGD E+PR+ EG V CHGFAWA+ AD+D+HILPLYHYV NV RT++ G+Y +VEG P CGCIE++P VS + CS++ EGI C +N L SQY+ L EP G M+ NLVR CDNED+PDYD +CSHNTYMCC TENDGQGMA+NT DVCRV+DYPS+G E+ G+SE E H HGFVW EDATDKYIHLL+QFVQ FDHRDRRGY+GK
Sbjct: 19 PMENPDDGASCSTYEEHVEVAKLLDSTCEWDPYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRESEGFVCCHGFAWAEGADVDTHILPLYHYVKNVGRTEEAGFYEMKLPDSVEGTPECGCIEEIPSVSCSECSRYSWEGIAGCGNNGLLSQYRGCLGEPCGPMDDNLVRTCDNEDIPDYDHGSCSHNTYMCCLTENDGQGMAENTVRRRVPAVASCVEFSCYSADRKDVGLTMLSVILGHLGATKDVCRVLDYPSVGGALEFAGDSEREAHRHGFVWTEDATDKYIHLLSQFVQKFDHRDRRGYYGK 332
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: D7FT53_ECTSI (Imm downregulated 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT53_ECTSI) HSP 1 Score: 240 bits (612), Expect = 8.720e-75 Identity = 109/177 (61.58%), Postives = 131/177 (74.01%), Query Frame = 1
Query: 439 LPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDD-GGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDN 966
L + + DG SCSTYDED++VA +L TCEW+TYMCC+T HD +G+ N DVC V P EG LE+P D EGPVYCHGFAW + AD+++HILPLYHYV N+ RT++ GGYYGNVEG P CGCIE+MP VS A CS+F +GI C + L SQY RLD P GEME+NLVR CDN
Sbjct: 10 LAVSSASDGGSCSTYDEDLEVAKLLDGTCEWDTYMCCYTNHDSGEGVTANTDVCSV---PSEG--LEMPGDSEGPVYCHGFAWPEGADVNNHILPLYHYVKNIGRTEEEGGYYGNVEGAPECGCIEEMPQVSFAECSRFSIDGIGECGEGGLYSQYNGRLDAPYGEMEHNLVRSCDN 181
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: A0A6H5L9G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G6_9PHAE) HSP 1 Score: 217 bits (553), Expect = 5.950e-66 Identity = 100/177 (56.50%), Postives = 123/177 (69.49%), Query Frame = 1
Query: 439 LPMENPEDGMSCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDD-GGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYRLDEPKGEMEYNLVRECDN 966
L + + DG SC+TYDED++VA +L +TCEW+TYMCC+T HD +G+ N DVC V P EG V YCHGFAW D AD+++HILPLYHYV N+ RT++ GGYYG+VEG P CGCIE+MP VS A CS+F +GI C + L SQY RL P GEME+NLVR CDN
Sbjct: 17 LAVSSASDGGSCTTYDEDLEVAKLLDDTCEWDTYMCCFTNHDSGEGVTANTDVCSV---PNEGSV-----------YCHGFAWPDGADVNNHILPLYHYVKNIGRTEEEGGYYGSVEGAPECGCIEEMPQVSFAECSRFDIDGIVGCGEGGLYSQYNGRLGAPYGEMEHNLVRSCDN 179
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: A0A6H5JNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM0_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 6.840e-22 Identity = 49/62 (79.03%), Postives = 49/62 (79.03%), Query Frame = -3
Query: 293 WSRTSRPPGSPSAAVPLPCLALPSAHCPTSASSPYPHPPSSRCSTPWDLTWFPCRGWALGCP 478
WSRTSRP G PSAAVPLP L LP H PTSASSP HPPSSR STPWDLTW PCR WA GCP
Sbjct: 2 WSRTSRPAGFPSAAVPLPPLPLPLTHRPTSASSPCLHPPSSRRSTPWDLTWSPCRVWAPGCP 63
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Match: D7G8D2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D2_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 8.440e-21 Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 973 VPDYDFRTCSHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHLLAQFVQHFDHRDRRGYFG 1245
V ++DF C +NT+MCCW +G + DNTDVC GE E+PG+SEG VHCHGFVWPE+A+D +I LA V +H D + Y G
Sbjct: 51 VKNFDFNQCDYNTWMCCWDGRNGLAVKDNTDVCSY-----RGE--EFPGDSEGPVHCHGFVWPENASDDFIKYLALDVAFINHVDEKAYTG 134 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15783.4255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15783.4255.1 >prot_Ecto-sp13_S_contig15783.4255.1 ID=prot_Ecto-sp13_S_contig15783.4255.1|Name=mRNA_Ecto-sp13_S_contig15783.4255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=417bp MYKSYLSMCAGPLLLAFAVKAADYNAPAPTPSPTYARPVSRYSGPTPTYGback to top mRNA from alignment at Ecto-sp13_S_contig15783:570..4064+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15783.4255.1 ID=mRNA_Ecto-sp13_S_contig15783.4255.1|Name=mRNA_Ecto-sp13_S_contig15783.4255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3495bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15783:570..4064+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15783:570..4064+ >mRNA_Ecto-sp13_S_contig15783.4255.1 ID=mRNA_Ecto-sp13_S_contig15783.4255.1|Name=mRNA_Ecto-sp13_S_contig15783.4255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1251bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15783:570..4064+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |