prot_Ecto-sp13_S_contig15773.4251.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15773.4251.1
Unique Nameprot_Ecto-sp13_S_contig15773.4251.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A6H5K3L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L9_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.320e-50
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 NTCPRALLRELDHVFPGVDLNNCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            +TCPRALLRELDHVFPGVDL+ CLAIPTNQKA MDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLP+
Sbjct:   29 HTCPRALLRELDHVFPGVDLDACLAIPTNQKAGMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPM 111          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A835Z3S3_9STRA (Methylmalonic aciduria and homocystinuria type D protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.150e-32
Identity = 57/85 (67.06%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    1 NTCPRALLRELDHVF--PGVDLNNCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            +TCPRAL REL HVF   GVDL  CLA+PTNQKA  DLV MG  V+ EKD LLN F  FA+ LC  +RE G+WADYIDPCSGLP+
Sbjct:    6 HTCPRALQRELTHVFRGTGVDLTGCLAVPTNQKAGTDLVNMGSDVDIEKDRLLNVFVDFAAWLCSTLREQGFWADYIDPCSGLPM 90          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: D8LKC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKC2_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.100e-26
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    1 NTCPRALLRELDHVFPGVDLNNCLAIPTNQKAVMDLVAMGDTVETEKDVLLNS 53
            +TCPRALLRELDHVFP VDL++CLAIPTNQKAVMDLVAMGDTVETEKDVLLNS
Sbjct:   29 HTCPRALLRELDHVFPAVDLDDCLAIPTNQKAVMDLVAMGDTVETEKDVLLNS 81          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A1Z5JV11_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV11_FISSO)

HSP 1 Score: 103 bits (256), Expect = 7.050e-26
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0
Query:    1 NTCPRALLRELDHVFPGVDLN--------NCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            +T P+ LLRE  HVFP  +L           LAIPTNQ AV DLVA+GD +E EKD  LN F  FA+  C+++++AGYWAD+IDPCSGLP+
Sbjct:   37 HTLPKPLLREFHHVFPEENLKLPAVDEACEFLAIPTNQHAVEDLVAIGDKIEQEKDRCLNVFMEFANDFCRKLQQAGYWADFIDPCSGLPM 127          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A7S2FSY7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSY7_9STRA)

HSP 1 Score: 103 bits (258), Expect = 8.730e-26
Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    3 CPRALLRELDHVFPGVDL-NNCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            CP+A+ REL HVF G  + ++ +AIPTNQ + MDLV +GD VE EKD  LN F  F   +C+Q+R  GYWADYIDPCSGLP+
Sbjct:   56 CPKAMRRELKHVFTGKTVTDDWIAIPTNQHSEMDLVNVGDDVEFEKDRCLNVFMDFGKAICEQLRSCGYWADYIDPCSGLPM 137          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A7R9UF95_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF95_9STRA)

HSP 1 Score: 103 bits (258), Expect = 8.920e-26
Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    3 CPRALLRELDHVFPGVDLNN--CLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            CP+ ++REL H+FPGV       +A PT Q AV DLV +G+++E EKD LLN F +FA  +C QI+E G+WADYIDPCSGLP+
Sbjct:   48 CPKPMVRELRHIFPGVITGEEAPIAFPTVQHAVQDLVRVGESIEDEKDKLLNRFVAFAEEVCSQIKERGFWADYIDPCSGLPM 130          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A7S2CG30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG30_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.960e-25
Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    3 CPRALLRELDHVFPGVDLN-NCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            CP+  LRE+ H+FPG+D++ + LA+PT Q +VMDLV +GD VE+EKD  L  F      LC +I+  G+WADYIDPCSGLP+
Sbjct:   36 CPKQFLREIRHIFPGLDIDESLLALPTAQHSVMDLVNVGDDVESEKDRCLIQFMELGKSLCLEIQARGHWADYIDPCSGLPM 117          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A7S2Y0K1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0K1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 9.260e-25
Identity = 49/82 (59.76%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    4 PRALLRELDHVFPGVDL--NNCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            PRALL EL HVFP   L    CLA+PT Q++  DLV  GD VE EKD  LN F+SFA  +C+++  AG+WADYIDPCSGLP+
Sbjct:   27 PRALLSELRHVFPNRSLYSEGCLAVPTLQQSTQDLVNWGDEVELEKDRCLNVFSSFARTVCERLIAAGHWADYIDPCSGLPM 108          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A7S0RSJ5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RSJ5_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 1.300e-24
Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    1 NTCPRALLRELDHVFPGVDLNNCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            ++CP  + RE+  VFP VDL+  L +PT Q A MDLV  G+TV+ EKD LL  F ++AS +C ++   G+WADYIDPCSGLP+
Sbjct:   18 HSCPARIRREVASVFPSVDLDKLLIVPTCQHAAMDLVQTGETVDVEKDNLLEKFMAWASAVCSKLGAQGHWADYIDPCSGLPM 100          
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Match: A0A7S1U3I4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3I4_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.150e-24
Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    3 CPRALLRELDHVFPGVDLNNCLAIPTNQKAVMDLVAMGDTVETEKDVLLNSFASFASGLCKQIREAGYWADYIDPCSGLPV 83
            C R+++REL  VFP VD+   +AIPT Q AV DLVA+G+ VE EKD LLN F  FA  + +     G+WADYIDPCSGLP+
Sbjct:   23 CQRSMIRELKSVFPTVDMAGAVAIPTVQHAVTDLVAVGEDVENEKDRLLNVFVDFAKDVVEAFAAGGFWADYIDPCSGLPM 103          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15773.4251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3L9_9PHAE2.320e-5093.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3S3_9STRA3.150e-3267.06Methylmalonic aciduria and homocystinuria type D p... [more]
D8LKC2_ECTSI2.100e-2692.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Z5JV11_FISSO7.050e-2654.95Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2FSY7_9STRA8.730e-2658.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9UF95_9STRA8.920e-2656.63Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2CG30_9STRA7.960e-2554.88Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2Y0K1_9STRA9.260e-2559.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0RSJ5_9CHLO1.300e-2453.01Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S1U3I4_9STRA2.150e-2456.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019362Methylmalonic aciduria and homocystinuria type D proteinPFAMPF10229MMADHCcoord: 2..82
e-value: 2.4E-19
score: 70.1
IPR019362Methylmalonic aciduria and homocystinuria type D proteinPANTHERPTHR13192MY011 PROTEINcoord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15773contigEcto-sp13_S_contig15773:48..3034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15773.4251.1mRNA_Ecto-sp13_S_contig15773.4251.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15773 48..3034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15773.4251.1 ID=prot_Ecto-sp13_S_contig15773.4251.1|Name=mRNA_Ecto-sp13_S_contig15773.4251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
NTCPRALLRELDHVFPGVDLNNCLAIPTNQKAVMDLVAMGDTVETEKDVL
LNSFASFASGLCKQIREAGYWADYIDPCSGLPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019362MMADHC