mRNA_Ecto-sp13_S_contig15768.4249.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15768.4249.1
Unique NamemRNA_Ecto-sp13_S_contig15768.4249.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: D7FKQ7_ECTSI (Eukaryotic translation initiation factor 2B delta subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ7_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 2.630e-173
Identity = 258/261 (98.85%), Postives = 259/261 (99.23%), Query Frame = 1 
Query:  283 MFSHLEQNRGVLPVTSKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
            MFSHLEQNRGVLP+TSKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKI EFINTRITLAANEIAKNAITKIRDGDVILTYG RSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK
Sbjct:    1 MFSHLEQNRGVLPLTSKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKIKEFINTRITLAANEIAKNAITKIRDGDVILTYG-RSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 260
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BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: A0A6H5JHE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHE2_9PHAE)

HSP 1 Score: 478 bits (1230), Expect = 1.190e-167
Identity = 258/290 (88.97%), Postives = 259/290 (89.31%), Query Frame = 1 
Query:  283 MFSHLEQNRGVLPVTSKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHK-----------------------------ALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
            MFSHLEQNRGVLP+TSKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHK                             ALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYG RSSLVESVLVAAQQAKRGSFRVIIVDSRP VEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK
Sbjct:    1 MFSHLEQNRGVLPLTSKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKVREVLALILLLCKTVNVLTDEPLTKNLCKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYG-RSSLVESVLVAAQQAKRGSFRVIIVDSRPEVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 289
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BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: A0A8K1C2L3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2L3_PYTOL)

HSP 1 Score: 299 bits (766), Expect = 7.780e-94
Identity = 154/268 (57.46%), Postives = 202/268 (75.37%), Query Frame = 1 
Query:  277 VHMFSHLEQNRGVLPVT-----SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
            V  FSHL Q      ++     S  +IHP+IL+LG KY+ G++ G  AR VAML AFKQV+ DYSTPPDKMLS DLDK L+P++QYLIDCRPHS+ MGNA + LRNII  +PP L E EAK  I+++I+E+I +RI LA   ++K A +KI DGDV+LTY +RS++VE VL  A + ++ SFRVI+VDSRP  EG+++ + L+  GI CTY+ + A+SYIMR+VTKV +GASA MSNGA +SRVGTA+VA+ AR  N+P++FCCETYK
Sbjct:  193 VSWFSHLPQYERESSLSLNVGFSNKEIHPSILSLGLKYAEGKIAGGNARCVAMLTAFKQVIADYSTPPDKMLSRDLDKTLKPLIQYLIDCRPHSIGMGNAIRRLRNIIGTTPPELSESEAKKHILEEIDEYIQSRILLAMKAVSKIAQSKIVDGDVVLTY-ARSNVVEMVLKEAHEQRKLSFRVIVVDSRPHYEGKKMVKALADLGIQCTYIQINALSYIMRDVTKVLLGASAFMSNGAAVSRVGTALVALTAREANVPVLFCCETYK 459
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BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: W4HC42_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HC42_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.760e-90
Identity = 163/352 (46.31%), Postives = 229/352 (65.06%), Query Frame = 1 
Query:   46 VIKPKPKLTKAERREIQERQRAAKASARTGEXXXXXXXXXXGKHGQASSLSPSLPRSG-------HASAGQKQAGVQQGALANNVHMFSHLEQNRGVLPVT-----SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
              + KPKLTK ERR  QE QR AKA+                K    +  +P+ P +          +   K + +Q+      V +FSHL Q      ++     SK +IHPAIL+LG KY+ G++ G  AR VAML AF+QV+ DY TPPDK+L  DLDK LRP++Q+LIDCRPHS+ MGNA + +RN+IA   PS  +++AK  ++D+I+++I  RI +A   ++K A +KI DGDVILTY +R+ ++E +L  A   K   FRV++VDSRP  EG++L   L+  G+PCTY+ + A+SY+M+EVTKVF+GA+A+MSNGAV++RVGTA+ AM A   N+P++FCCETYK
Sbjct:   62 TFEKKPKLTKEERRAQQEAQRLAKAAG------------APAKTAPKAXXAPAPPTARMQYDDPKKVAKYSKSSVIQRTQAQKQVALFSHLPQFERESSLSLNVGFSKAEIHPAILSLGLKYAEGKLVGGNARCVAMLTAFQQVIKDYHTPPDKVLRRDLDKTLRPLIQFLIDCRPHSIGMGNAIRYVRNVIATLDPSKGDDDAKTFVLDEIDQYIENRIVMAMTAVSKFACSKIVDGDVILTY-ARADIIEVLLKQAFDQKI-QFRVLVVDSRPHFEGKKLIRALAEHGLPCTYIQINALSYVMKEVTKVFLGATAIMSNGAVVARVGTALCAMTAHEFNVPVLFCCETYK 399
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BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: K3WT83_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT83_GLOUD)

HSP 1 Score: 285 bits (728), Expect = 2.350e-88
Identity = 142/268 (52.99%), Postives = 203/268 (75.75%), Query Frame = 1 
Query:  277 VHMFSHLEQNRGVLPVT-----SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
            V +FSHL Q      ++     S  +IHP++L+LG KY+ G++ G  AR +AML AFK+V+ DY TP +K+LS DLDK LRP++QYLIDCRPH +SMGNA ++LR+II+ + P L ++EAK  I+ +I+E+I +RI LA   ++K+A +KI +GDVILTY +RS++VE +L  A + ++ +FRVI+VDSRP  EG++L ++L+  G+PCTY+ + A+SYIMR+VTKV +GASA MSNG  + RVGTA+VA+ AR  N+P++FCCETYK
Sbjct:  177 VPLFSHLPQYERESSLSLNVGFSNKEIHPSVLSLGLKYAEGKILGGNARCIAMLNAFKEVIADYVTPVNKVLSRDLDKSLRPLIQYLIDCRPHCISMGNAIRSLRSIISTTSPELSDDEAKKHIIGEIDEYIQSRIILAMRAVSKHAQSKISEGDVILTY-ARSNVVEMILKEAHELRKINFRVIVVDSRPHYEGKKLVKSLADTGLPCTYIHINALSYIMRDVTKVLLGASAFMSNGVAVGRVGTAMVAITARDANIPVLFCCETYK 443
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BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: A0A5D6Y8P8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8P8_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.660e-87
Identity = 143/268 (53.36%), Postives = 199/268 (74.25%), Query Frame = 1 
Query:  277 VHMFSHLEQNRGVLPVT-----SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
            V +FSHL Q      ++     S  ++HP++LALG KY+ G++ G  AR VAML AFK V+ DY TP +K+LS DLDK LRP++QYLIDCRPH +SMGNA ++LR+II+ +PP L ++EAK  I+ +I+E+I +RI LA   ++K+A +KI DGDV+LTY +RS++VE++L  A  A+R  FRV++ DSRP  EG++L ++L+  G+ CTYV L A+SY+MR+VTKV +GASA MSNG  + RVGTA+VAM A    +P++FCCETYK
Sbjct:  183 VPLFSHLPQYERESSLSLNVGFSNKELHPSVLALGLKYAEGKIAGGNARCVAMLTAFKHVIADYVTPLNKVLSRDLDKALRPLIQYLIDCRPHCISMGNAIRSLRSIISTTPPELSDDEAKKHILGEIDEYIQSRILLAMKAVSKHAQSKISDGDVVLTY-ARSNVVEALLKEAHDARRVRFRVVVADSRPHFEGKKLVKSLADAGLQCTYVHLNALSYVMRDVTKVLLGASAFMSNGVAVGRVGTALVAMNAHDAGVPVLFCCETYK 449
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BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: A0A225VWI3_9STRA (Translation initiation factor eIF-2B subunit delta n=16 Tax=Phytophthora TaxID=4783 RepID=A0A225VWI3_9STRA)

HSP 1 Score: 282 bits (722), Expect = 2.340e-87
Identity = 142/272 (52.21%), Postives = 197/272 (72.43%), Query Frame = 1 
Query:  277 VHMFSHLEQNRGVLPVT------SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAK---RGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
            V MFSHL Q      ++      +K ++H A+LALG KY+ G+++G  AR +AM+ AFKQV+ DY TPPDK LS DLDKRLRP++QYLIDCRPH + MGNA + LR +I  +PP L EEEAK  I D++++++ +RI LA+  + KNA +KI  GDVILTY +R+++VE +L+   +       + R+I+VDSRP  EGR+L   L++ G+ C+Y+ + A+SYIMREVTKVF+GA+A MSNG  ++RVGTA+VAM A   N+P++FCCETYK
Sbjct:  173 VEMFSHLPQYERESSLSLNVGFSNKEEVHAAVLALGLKYAEGKISGGNARCIAMITAFKQVIDDYITPPDKQLSRDLDKRLRPLIQYLIDCRPHGIGMGNAIRRLRRVIGSTPPELSEEEAKRRIRDEMDDYVQSRILLASRAVVKNAQSKISAGDVILTY-ARANVVEELLLETAKISPEIASTLRIIVVDSRPHYEGRKLVSALASAGLQCSYLQINALSYIMREVTKVFLGAAAFMSNGVAVARVGTALVAMTAHEANVPVLFCCETYK 443
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: A0A3R7YCN4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7YCN4_9STRA)

HSP 1 Score: 275 bits (702), Expect = 3.340e-87
Identity = 134/245 (54.69%), Postives = 188/245 (76.73%), Query Frame = 1 
Query:  331 KGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
            + +IHPAIL+LG KY+ G++ G  AR VAML AF+QV+ DY TPPDK+L  DLDK LRP++Q+LIDCRPHS+ MGNA + +RN+IA   PS  +++AK  ++D+I+++I  RI +A   ++K A +KI DGDVILTY +R+ ++E +L  A   K   FRV++VDSRP  EG++L   L+  G+PCTY+ + A+SY+M+EVTKVF+GA+A+MSNGAV++RVGTA+ AM A   N+P++FCCETYK
Sbjct:   70 QAEIHPAILSLGLKYAEGKLVGGNARCVAMLTAFQQVIKDYHTPPDKVLRRDLDKTLRPLIQFLIDCRPHSIGMGNAIRYVRNVIATLDPSKGDDDAKTFVLDEIDQYIENRIVMAMTAVSKFACSKIVDGDVILTY-ARADIIEVLLKQAFDQKI-QFRVLVVDSRPHFEGKKLIRALAEHGLPCTYIQINALSYVMKEVTKVFLGATAIMSNGAVVARVGTALCAMTAHEFNVPVLFCCETYK 312
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: A0A6G0XLH0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLH0_9STRA)

HSP 1 Score: 280 bits (715), Expect = 7.850e-87
Identity = 158/345 (45.80%), Postives = 224/345 (64.93%), Query Frame = 1 
Query:   46 VIKPKPKLTKAERREIQERQRAAKASARTGEXXXXXXXXXXGKHGQASSLSPSLPRSGHASAGQKQAGVQQGALANNVHMFSHLEQNRGVLPVT-----SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
              + KPKL+K ERR  Q     AKA+   G           G     + L    P+    +   K + +Q+      V MFSHL Q      ++     SK +IHPAIL+LG KY+ G++ G  AR VAML AF+QV+ DY  PPDK+L  DLDK LRP++Q+LIDCRPHS+ MGNA + +RN+IA   P+  +++AK  I+++I+++I TRI ++   ++K A +KI DGDVILTY +R+ ++E +L  A   K   FRV++VDSRP  EG++L   L+  G+PCTY+ + A+SY+M+EVTKVF+GA+A+MSNGA ++RVGTA+ AM A   N+P++FCCETYK
Sbjct:   62 TFEKKPKLSKEERRAQQXXXXXAKAA---GNAKPAATKPVAGPAPPTARLQYDDPKK--VAKYSKSSVIQRTQAQKQVAMFSHLPQFERESSLSLNVGFSKAEIHPAILSLGLKYAEGKIAGGNARCVAMLTAFQQVIKDYQCPPDKVLRRDLDKTLRPLIQFLIDCRPHSIGMGNAIRYVRNVIATLDPAKGDDDAKQFILEEIDQYIQTRIVMSMTAVSKFACSKIVDGDVILTY-ARADVIEMLLKQAHDDKI-KFRVLVVDSRPHFEGKKLIRALAEHGVPCTYLQINALSYVMKEVTKVFLGATAIMSNGAAVARVGTALCAMTAHEFNVPVLFCCETYK 399
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Match: A0A024UTM5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTM5_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.330e-86
Identity = 166/351 (47.29%), Postives = 230/351 (65.53%), Query Frame = 1 
Query:   46 VIKPKPKLTKAERREIQERQRAAKASARTGEXXXXXXXXXXGKHGQASSLSPSLPRSGHASAGQKQAGVQQGALANNVHMFSHLEQNRGVLPVT-----SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKINEFINT------RITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK 1065
              + KPKLTK ERR  QE QR AK+    G      XXXXX     ++ L    P+    +   K + +Q+      V +FSHL Q      ++     SK +IHPAIL+LG KY+ G++ G  AR VAML AFKQV+ DY  P DK+L  DLDK LRP++Q+LIDCRPHS+ MGNA + +RN+IA   PS  +++AK+ ++D+I+++I        RI +A   +AK A TKI DGDVILTY +R+ ++E +L  A   K   FRV++VDSRP  EG++L   L+  G+PC Y+ + A+SY+M+EVTKVF+GA+A+MSNGA ++RVGTA+ AM A+  N+P++FCCETYK
Sbjct:   50 TFEKKPKLTKEERRAQQEAQRLAKSG---GAPAKPTXXXXXXXXPPSARLQYDDPKK--VAKYSKSSVIQRTQAQKQVALFSHLPQFERESSLSLNVGFSKAEIHPAILSLGLKYAEGKLAGGNARCVAMLTAFKQVIKDYHAPADKVLRRDLDKTLRPLIQFLIDCRPHSIGMGNAIRYVRNVIATLDPSKGDDDAKSFVLDEIDQYIQASLSNRNRILMAMTAVAKYACTKIVDGDVILTY-ARADIIEVLLKQAYDGKT-KFRVLVVDSRPHFEGKKLVRALAEHGVPCAYLQINALSYVMKEVTKVFLGATAIMSNGAAVARVGTALCAMTAQEFNVPVLFCCETYK 393
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15768.4249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ7_ECTSI2.630e-17398.85Eukaryotic translation initiation factor 2B delta ... [more]
A0A6H5JHE2_9PHAE1.190e-16788.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1C2L3_PYTOL7.780e-9457.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4HC42_9STRA2.760e-9046.31Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
K3WT83_GLOUD2.350e-8852.99Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y8P8_9STRA1.660e-8753.36Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225VWI3_9STRA2.340e-8752.21Translation initiation factor eIF-2B subunit delta... [more]
A0A3R7YCN4_9STRA3.340e-8754.69Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0XLH0_9STRA7.850e-8745.80Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UTM5_9STRA1.330e-8647.29Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15768contigEcto-sp13_S_contig15768:67..3745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score495.0
Seed ortholog evalue2.9e-137
Seed eggNOG ortholog2880.D7FKQ7
Model size1065
KEGG koko:K03680
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001541,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005851,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007272,GO:0007275,GO:0007399,GO:0007417,GO:0007548,GO:0008135,GO:0008150,GO:0008152,GO:0008366,GO:0008406,GO:0008585,GO:0009058,GO:0009059,GO:0009987,GO:0010001,GO:0010467,GO:0014003,GO:0019538,GO:0021782,GO:0022008,GO:0022414,GO:0023052,GO:0030154,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0034645,GO:0042063,GO:0042552,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045137,GO:0046545,GO:0046660,GO:0048468,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048608,GO:0048709,GO:0048731,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050851,GO:0050852,GO:0050896,GO:0051716,GO:0061458,GO:0065007,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons8
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG1184@1,KOG1467@2759
Cds size1038
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15768.4249.1prot_Ecto-sp13_S_contig15768.4249.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15768 67..3718 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462833.4973338-CDS-Ecto-sp13_S_contig15768:66..1321681462833.4973338-CDS-Ecto-sp13_S_contig15768:66..132Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 67..132 -
1681462833.5122797-CDS-Ecto-sp13_S_contig15768:288..3601681462833.5122797-CDS-Ecto-sp13_S_contig15768:288..360Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 289..360 -
1681462833.5245442-CDS-Ecto-sp13_S_contig15768:567..7481681462833.5245442-CDS-Ecto-sp13_S_contig15768:567..748Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 568..748 -
1681462833.534727-CDS-Ecto-sp13_S_contig15768:903..10821681462833.534727-CDS-Ecto-sp13_S_contig15768:903..1082Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 904..1082 -
1681462833.544728-CDS-Ecto-sp13_S_contig15768:1543..16391681462833.544728-CDS-Ecto-sp13_S_contig15768:1543..1639Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 1544..1639 -
1681462833.5543787-CDS-Ecto-sp13_S_contig15768:2040..21781681462833.5543787-CDS-Ecto-sp13_S_contig15768:2040..2178Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 2041..2178 -
1681462833.5636854-CDS-Ecto-sp13_S_contig15768:2438..25341681462833.5636854-CDS-Ecto-sp13_S_contig15768:2438..2534Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 2439..2534 -
1681462833.5736737-CDS-Ecto-sp13_S_contig15768:3508..37181681462833.5736737-CDS-Ecto-sp13_S_contig15768:3508..3718Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15768 3509..3718 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462833.58282-UTR-Ecto-sp13_S_contig15768:3718..37451681462833.58282-UTR-Ecto-sp13_S_contig15768:3718..3745Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15768 3719..3745 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15768.4249.1

>prot_Ecto-sp13_S_contig15768.4249.1 ID=prot_Ecto-sp13_S_contig15768.4249.1|Name=mRNA_Ecto-sp13_S_contig15768.4249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
MEGQERVIKPKPKLTKAERREIQERQRAAKASARTGEQAAGASGLSGGKH
GQASSLSPSLPRSGHASAGQKQAGVQQGALANNVHMFSHLEQNRGVLPVT
SKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKML
SWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKA
SIVDKINEFINTRITLAANEIAKNAITKIRDGDVILTYGSRSSLVESVLV
AAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMR
EVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYK
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mRNA from alignment at Ecto-sp13_S_contig15768:67..3745-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15768.4249.1 ID=mRNA_Ecto-sp13_S_contig15768.4249.1|Name=mRNA_Ecto-sp13_S_contig15768.4249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3679bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15768:67..3745- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGAGTGGGGGCGTTAACGAAGGCAAGATGGAAGGCCAGGAGCGTGTCAT
CAAGCCGAAGCCTAAACTGACTAAAGCTGAACGAAGAGAAATTCAGGAGA
GGCAGAGAGCCGCGAAAGCCTCAGCTAGAACAGGCGAACAAGCCGCTGGA
GCCTCAGGCTTGTCTGGCGGGAAACATGGACAGGCGAGCTCGTTATCGCC
ATCACTGCCACGCTCGGGACATGCATCTGCCGGACAGGTTCGTGCATCGG
TCCCACGCATGGGTACAAAGCATAGAGTGTTGCAGGTTTTTGTCTCTTTT
TTTTTACCGGACTGTCAAGTCAAGCGGCTACTGCCGCGCACTCCACGCCG
CCATACAGCTTTACTTCTGTCATGACATACAAAGAGCCGCATACACCTTG
CTGCTGTGATGTATAACGACCTTCCTTTCCTTCGTAAGGTGTAGTATCGC
TTATGTATCATCGATTCATTTTTTCTTCGGGGTAAGGAGATGGAACAACA
TGTACATGTTTACGATGCTAAACAATTTTCTCAGCTTTCAGCGGCTTCAG
TATTCCTCAGGCACCGTTCTCGGAACCTTCACTCGTGTGGTGTGTATCAA
CCGGTGTGTGCTTGTGAAAATCGGTATAGGGCTGAGGTCGTTATGCCCCT
TTTGGGGTAAAGAACGGTGTGGTATGAAAACGGTTTGAGCAAGAACCACA
GCTTTTGTCTGCCTCCCTCGCTTACCATCAAAACAACAAAACAAAAGTAC
GTGTCACTACAGGAGTGCAACATAGCACCGCAGCAGCAGCGGACTTCTCG
AAATAATTGGTAAACAACGCCCTATTTTTTGGCTTGGGTTAAAGAGAGAG
ACGGAGAGATCCTTCCACGTATGGTTTTTGGCTTCCCGTAGGATTGCGAG
CCATCGCACCTCCGTGTGGTCGTTTATTAAACATTTTCGCAATTTCATAT
TTTCGTCGCACAACGGTTCGGTAGCTCCGGACTGTGCGATGACTCCGGAC
CCTGTGCGGAGAAATCGTTTAACTAGTTTATTTTATCGCATAGAGGTGCG
AGGACTCCAGACTGTGCGATGACTCTGAACCGCGTGATGACTCGTAATGT
TCCGGTATCTCTTTGATGTGGACTGGAATGGAACCCACTTCCCTTTGAGG
GAACACTTGATACATCCTTAAGATACGGCACCTCTGCCGCATGTCATGTA
CGCTTGGGCAGAAACAAGCGGGGGTGCAGCAAGGTGCATTGGCGAACAAC
GTCCACATGTTTTCGCATCTGGAGCAAAATCGAGGAGTGCTTCCAGTGAC
GTCGAAGGTACGAATGTTCTGAAGGAATAGATACGCTCTGCAGCCTCAAC
AATCGTCACCCGGCCGAACCAAGGACTTCGTTGTCAGCAATGATGTCGAC
GATAGTGGAAAAGAGAGACGAAGATAGCTCGCTGCACCGTTGAGACTTGT
TGACTGCCCTAAAATACGCGAACAGAAGAGCTGCTGTAAGAAAGTTCCGC
CGAAAAGATGCTTGTTGGCAGCAGTCTATAGACCATAATATGCAAAACGT
GACGTGCTTGGTTGCAGGGAGACATCCACCCTGCGATCTTGGCTCTAGGA
CGCAAGTATTCGAGCGGTGAGGTGACTGGAGCAACCGCAAGGGCAGTGGC
GATGCTGATGGCGTTCAAGCAGGTCGTCATGGATTACTCCACACCCCCGG
ACAAGGTGTAATCTTGGTGCAAAGCAGGGAATTTAAACGTTCTCGCACCG
TCGCTGTCGACTTTTGCGGCACCTTCGAAGACTCGTCACGCTGTGATGCG
CCTCCGTGTTCTGTCACTCTCCGGCTTGTCTGGTTGGGCCACAATTTCAC
TTATGGGCTTGCGTTCCGCCGATTTCATAGCGGCTTGGAGGTCTCCTGCT
TCGTTCCACCCGCAAGCGTGCCTCTGTGTGGTGTGGTTGGCATTCGCTGT
TCATAAGAACGGCTAGCCTAGAAGGCCACGCTGCAGTCAGCGGCTGACCG
AGTAGTGGGTTATCCCACCTATCCCATCGATTCACCACCCGCCCGCTTAG
AGGTTTGGTTGACCTCTGTTGCATGCTTTAAACTGCCGTCGATGAAACAA
CCACAGATGCTGAGCTGGGATCTGGACAAGAGGCTCCGTCCGATGATGCA
ATACCTGATAGATTGCCGACCCCACTCAGTGAGCATGGGCAATGCCCATA
AGGTGCGGGAACTCCTTGAACTTATTTTGCGTATGATTGGCATTGTACTT
CCAAAACATCGAAGTGAAGATAATCACGGAATGTTTTCGAGCACGGGTGC
CGCCTACAATGTACGGGAAGCCCTGAACATGGCTGCGTGTCATTGGGGTT
CTGGTGCGAAAACACCAAAGCTCTGGCCGACACTGTTGAATGTAACCACA
GGGTTATATATTCTCGTGATGCGCGGAAACAGCTTACGATACTCCCTCTG
TTGTATCCGTGGGCGTATTGCGCTCACTCCTCGTTGTCGGGCTCAATGGA
TGCGGATGGCCTCGATGAACCTTTTGAACATGGTGCCCTTCCCACATATT
TTGGAAAGTCGGCGTTGGGGCAAATCTTCATTTTTTGTAGTGGGATGCAG
TGCTGTGCAAGACAGTCAACTGACGTTCGAACTGATGAACCTCTGACTAA
AAACTTGTGCAAGGCGTTGAGGAATATCATCGCCAAGTCGCCCCCTTCTC
TGCCGGAGGAAGAGGCCAAAGCGAGCATCGTTGACAAGATCAACGAGTTC
ATAAACACGCGGATTACCCTGGCGGCGAACGAGATCGCTAAGAACGCCAT
CACTAAGATCAGGGATGGTGACGTAATCCTGACATACGGAAGGTGTGTTG
TTAGCTTGTTAGGCACAGCGTTAGGCCTCTTACCGCAGAATAAAGGTGAA
AATGGTAGCACGTTGGTGAAACGGAATGCAGCCTTCGCTGGTTGCGGCAT
TTTCACCACCATTATATTCGTCATCTCCCTTCATTGGTGTTGCGGAGCAG
GTCTTCTTTGGTCGAAAGCGTGTTGGTGGCTGCGCAGCAGGCCAAACGAG
GGTCTTTCCGGGTGATCATCGTGGACTCGCGCCCTGGAGTGGAAGGTCGC
CAGCTTTCCGAAACACTTTCTGCGGAGGGCATTCCTTGCACATACGTCCT
GCTCACTGCAATATCTTACATCATGAGGGTAAGCATGGACAACCTTTCTC
CTGCTTTGAATGTGCCTTTCTGATGTTCGTGGTTCTTGGGTAGTTCGTGC
AATCTTGGCGTGCAAGAGGAACGTGGGTGTGATGACCGAAAACGCCGGAT
CACACCTATTGCAGAATGGCAGAAACTCCATTTTTCTTTGCGACCCTCTC
ACACCGTTTGTTGCATGATCTCGTGCAACTGGCAGGAAGTGACGAAGGTT
TTCATCGGTGCTTCGGCAATGATGTCAAACGGCGCCGTCTTGTCCCGAGT
GGGCACGGTGAGTACCTTTCGTTTCGAGAGGGACCATGCGCTGGAGATAA
GATCGTTTGGTCTAGGAACCGTGTGTTTCCTGTCAGTAATGCATGCTCCC
CCATCGCATGTCCCGCCCCGCCTTTCCTTTCCTCTGTCAATTGGGTCGCG
GAATGATCTTCAGGCAGTCGTGGCAATGATGGCGCGCTCGCACAACCTCC
CAATCATGTTCTGCTGCGAAACCTACAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15768:67..3745-

>mRNA_Ecto-sp13_S_contig15768.4249.1 ID=mRNA_Ecto-sp13_S_contig15768.4249.1|Name=mRNA_Ecto-sp13_S_contig15768.4249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1038bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15768:67..3745- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGGCCAGGAGCGTGTCATCAAGCCGAAGCCTAAACTGACTAAAGC
TGAACGAAGAGAAATTCAGGAGAGGCAGAGAGCCGCGAAAGCCTCAGCTA
GAACAGGCGAACAAGCCGCTGGAGCCTCAGGCTTGTCTGGCGGGAAACAT
GGACAGGCGAGCTCGTTATCGCCATCACTGCCACGCTCGGGACATGCATC
TGCCGGACAGAAACAAGCGGGGGTGCAGCAAGGTGCATTGGCGAACAACG
TCCACATGTTTTCGCATCTGGAGCAAAATCGAGGAGTGCTTCCAGTGACG
TCGAAGGGAGACATCCACCCTGCGATCTTGGCTCTAGGACGCAAGTATTC
GAGCGGTGAGGTGACTGGAGCAACCGCAAGGGCAGTGGCGATGCTGATGG
CGTTCAAGCAGGTCGTCATGGATTACTCCACACCCCCGGACAAGATGCTG
AGCTGGGATCTGGACAAGAGGCTCCGTCCGATGATGCAATACCTGATAGA
TTGCCGACCCCACTCAGTGAGCATGGGCAATGCCCATAAGGCGTTGAGGA
ATATCATCGCCAAGTCGCCCCCTTCTCTGCCGGAGGAAGAGGCCAAAGCG
AGCATCGTTGACAAGATCAACGAGTTCATAAACACGCGGATTACCCTGGC
GGCGAACGAGATCGCTAAGAACGCCATCACTAAGATCAGGGATGGTGACG
TAATCCTGACATACGGAAGCAGGTCTTCTTTGGTCGAAAGCGTGTTGGTG
GCTGCGCAGCAGGCCAAACGAGGGTCTTTCCGGGTGATCATCGTGGACTC
GCGCCCTGGAGTGGAAGGTCGCCAGCTTTCCGAAACACTTTCTGCGGAGG
GCATTCCTTGCACATACGTCCTGCTCACTGCAATATCTTACATCATGAGG
GAAGTGACGAAGGTTTTCATCGGTGCTTCGGCAATGATGTCAAACGGCGC
CGTCTTGTCCCGAGTGGGCACGGCAGTCGTGGCAATGATGGCGCGCTCGC
ACAACCTCCCAATCATGTTCTGCTGCGAAACCTACAAG
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