mRNA_Ecto-sp13_S_contig15765.4246.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: D7G2Q9_ECTSI (FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q9_ECTSI) HSP 1 Score: 368 bits (944), Expect = 2.370e-127 Identity = 191/202 (94.55%), Postives = 195/202 (96.53%), Query Frame = 1
Query: 1 ETKGVTVDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEIRAALRVKGEQTVKSRTNKAVDEAVKKFLLSSCNVNADKV 606
ETKGVTVDLAEYKGGAVTVRVPLIEITEAQ VEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAK+ENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDE+RAALRVKGEQTVK+RT+KAVDEAVKKFLLSSCNVNADKV
Sbjct: 7 ETKGVTVDLAEYKGGAVTVRVPLIEITEAQ-------VEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAKKENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEVRAALRVKGEQTVKNRTDKAVDEAVKKFLLSSCNVNADKV 201
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A7S0VQZ5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VQZ5_9CRYP) HSP 1 Score: 124 bits (311), Expect = 7.280e-31 Identity = 76/204 (37.25%), Postives = 116/204 (56.86%), Query Frame = 1
Query: 7 KGVTVDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKLIPVRFVE-EGGTKMGHTVIMNWD--AKVDGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEIRAALRVKGEQTVKSRTNKAVDEAVKKFLLSSCNVNADKVS 609
K V L +Y G +VT+ P E++EA V L+++ K Y+L RF + EGG +MGHTV++N+ + G + G K +ELE KEG EPW+TFA+ +AVGMGQ E K F TFP D+ + L+GKQ + VK I +K K+P+TR ++ RA + E ++ + VD+A++ L+ +C + K +
Sbjct: 75 KNAEVTLGQYTGLSVTL--PRAEVSEA-------AVAKILKENAKDYRLESARFTDGEGGARMGHTVLINFVGYSPETGAELKGTKANMYELELKEGQKEPWSTFASNIAVGMGQDEMKSFVVTFPGDYAVPALQGKQVRFETYVKKIMKKVAKDPDTRQEEVQRADAVAQLEAAIERNNLEKVDQALRLELMKTCAADTTKAT 269
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A4D9CVA6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVA6_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.080e-27 Identity = 72/174 (41.38%), Postives = 95/174 (54.60%), Query Frame = 1
Query: 19 VDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKV------------DGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEIRAALR 504
V L YK GA++ P +++A+ T +KK +KL PVRFVEEGGT+MGHTV+ +W A G +P A +NF LE KE EP A+FA +A GMGQMETKVF PE IE RG A + +V++I KE + RS +E +AA+R
Sbjct: 14 VTLGPYKNGALSFTYPKPTVSDAEVEAQVKTA------AKKTFKLTPVRFVEEGGTRMGHTVVCDWKATYVSGGDPAKHSLRPGAVLPRADIKNFVLELKEDQSEPLASFARAVASGMGQMETKVFEVAMPESATIESWRGVTAKIMLLVRSINIKENLAADGRSIEEKQAAVR 181
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A7S1MV31_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MV31_HEMAN) HSP 1 Score: 83.6 bits (205), Expect = 1.260e-16 Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 241 VPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEIRAALRVKGEQTVKSRTNKAVDEAVKKFLLSSCNVNADKVS 609
+ G K +ELE K H EPW+TF +AVGMGQ E K F TFP+D+ + L GKQ + VK I + KE + R + E RA E +++ VD+A+++ L+ +C + K +
Sbjct: 2 MKGTKANMYELELKGDHKEPWSTFTENIAVGMGQDEMKSFVVTFPDDYAVPALVGKQVRFETYVKKIMNRVAKEADARPEAEQRAEAIAALEASMERSNLDKVDQAIRQELMKTCTADTTKAT 124
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A4D9DGH6_9STRA (ABC transporter domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGH6_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.220e-13 Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 1
Query: 19 VDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKV------------DGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGM 336
V L YK GA++ P +++A+ T +KK +KL PVRFVEEGGT+MGHTV+ +W A G +P A +NF LE KE EP A+FA +A GM
Sbjct: 74 VTLGPYKNGALSFTYPKPTVSDAEVEAQVKTA------AKKTFKLTPVRFVEEGGTRMGHTVVCDWKATYVSGGDPAKHSLRPGAVLPRADIKNFVLELKEDQSEPLASFARAVASGM 185
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: D5WUL5_KYRT2 (Trigger factor n=6 Tax=Kyrpidia TaxID=1129704 RepID=D5WUL5_KYRT2) HSP 1 Score: 69.3 bits (168), Expect = 2.650e-10 Identity = 64/204 (31.37%), Postives = 104/204 (50.98%), Query Frame = 1
Query: 19 VDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIM-NWDAKVDGRPVPGAKRENFELEFKEGHPEPWATFAT---KMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKE---------PETRSDDEIRAALRVKGEQTVKS--RT---NKAVDEAVKKFLL 576
V+L YKG VTV +TE + V+ L+ ++ + I V V EGG ++M +++ VDG P+ G + E+++LE G TF + +GM Q E + TFP+D+ +EGLRGK+AL + + +I RK + E E + +E+RA L+ K EQ + RT N+ VD+ V++ ++
Sbjct: 118 VELGTYKG--VTVEDKEFPVTE-------EDVDKELENLRRQHAQIEV--VGEGGRVQNEDLVMIDFEGFVDGEPLEGGQGEDYQLEIGSG------TFVRGFEEQLIGMTQGEDREIRVTFPDDYHVEGLRGKEALFKVHLHDIKRKRLPELDDEFAKDISEFETLEELRADLKNKLEQRAEQDHRTYLENQVVDKVVEEAVV 304
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A4V3ETB1_9CLOT (Trigger factor n=1 Tax=Fonticella tunisiensis TaxID=1096341 RepID=A0A4V3ETB1_9CLOT) HSP 1 Score: 67.8 bits (164), Expect = 8.970e-10 Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 1
Query: 19 VDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKE---------PETRSDDEIRAALRVKGEQTVKSRTNKAV-DEAVKKFL 573
V+L +YKG IE+ + + + VEA L + I + EEG + +++++ +DG P G K EN+EL+ G P F ++ VG ET +FPED+ +E L+GKQAL + +K+I KE+ E E + +E+RA +R E++ K R K DE VKK +
Sbjct: 116 VELGQYKG---------IEVKKIEYPVTDEDVEAQLNSMRDRNARIITK--EEGTVEKDDIAVIDFEGFIDGVPFEGGKGENYELKIGSGTFIPG--FEDQL-VGAKIGETVDVNVSFPEDYHVEELKGKQALFKVTIKSIKVKELPELDDEFAKDVSEFDTLEELRADIRKHQEESNKQRAKKDYEDEVVKKVV 296
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A1Y3PE99_9BACI (Trigger factor n=1 Tax=Bacillus thermozeamaize TaxID=230954 RepID=A0A1Y3PE99_9BACI) HSP 1 Score: 67.4 bits (163), Expect = 1.220e-9 Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 70 IEITEAQARTGTDTVEAALQKSKKPY-KLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKE 462
+EI E + V+A L++ ++ +L+PV EEG + G + ++++ VDG+P G K EN+ L G P + VGM E K TFPED+ +E L+GK+A + +K I RK + E
Sbjct: 124 LEIPEKDFSVSEEDVQAELERRRERVAELVPV---EEGPVETGDLIRLDFEGFVDGQPFEGNKAENYPLTVGSGALIPGFE---EQLVGMKNGEEKEIQVTFPEDYRVEELKGKEATFRVKIKEIKRKRLPE 249
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A353T184_9FIRM (Trigger factor n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A353T184_9FIRM) HSP 1 Score: 65.1 bits (157), Expect = 7.840e-9 Identity = 48/157 (30.57%), Postives = 76/157 (48.41%), Query Frame = 1
Query: 19 VDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKLIPVRFVE--EGGTKMGHTVIMNWDAKVDGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDD 483
V+L +YKG IE+ +A + VE AL+K+ R+++ + G + G +++D VDGR PG E L+ G P + +GM E K TFPED++ E L+GK+A+ + +I +KE+ E R+DD
Sbjct: 116 VELGQYKG---------IEVEDANHTVSDEEVEEALKKALDDN----ARWIDVIDRGAENGDRATLDFDGSVDGREFPGGSAEKQSLDIGSGQFIPGFE---EQLIGMKPEEEKDITVTFPEDYQAEDLKGKEAVFHVKIHDIKKKELPE---RNDD 253
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Match: A0A1H2RYC5_9BACL (Trigger factor n=1 Tax=Marininema mesophilum TaxID=1048340 RepID=A0A1H2RYC5_9BACL) HSP 1 Score: 64.7 bits (156), Expect = 1.020e-8 Identity = 49/149 (32.89%), Postives = 71/149 (47.65%), Query Frame = 1
Query: 19 VDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAAL-QKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAKRENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKE 462
V L EYKG +EI E + VEA L Q ++ +LI + EEG + G I++++ VDG G K E F LE G P + +GM E K TFPE+++ E L+GK+A+ + + I R E+ E
Sbjct: 116 VKLGEYKG---------LEIEEKDFSVSQEDVEADLKQMQERQGQLIAI---EEGAIEEGDRAILDFEGFVDGEAFEGGKGEQFTLEIGSGQFIPGFE---EQLIGMAPGEEKDITVTFPEEYQEENLKGKEAVFKVKIHEIKRTELPE 249 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15765.4246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15765.4246.1 >prot_Ecto-sp13_S_contig15765.4246.1 ID=prot_Ecto-sp13_S_contig15765.4246.1|Name=mRNA_Ecto-sp13_S_contig15765.4246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp ETKGVTVDLAEYKGGAVTVRVPLIEITEAQARTGTDTVEAALQKSKKPYKback to top mRNA from alignment at Ecto-sp13_S_contig15765:118..3753+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15765.4246.1 ID=mRNA_Ecto-sp13_S_contig15765.4246.1|Name=mRNA_Ecto-sp13_S_contig15765.4246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15765:118..3753+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15765:118..3753+ >mRNA_Ecto-sp13_S_contig15765.4246.1 ID=mRNA_Ecto-sp13_S_contig15765.4246.1|Name=mRNA_Ecto-sp13_S_contig15765.4246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15765:118..3753+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |