mRNA_Ecto-sp13_S_contig1576.4244.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI) HSP 1 Score: 998 bits (2581), Expect = 0.000e+0 Identity = 537/598 (89.80%), Postives = 545/598 (91.14%), Query Frame = 2
Query: 899 RED*ASTYRPPTLSSCTTQIGTRRQGI-----------------DSAADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKASMHPMSSHAEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIKKRTMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSMAFAPADWERHVKNVEKGERKIEEINRLMGATKSFISKFANPWEQLTFQYTGTQGKVFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDSRFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWHKSRQGTERGAGPGGSERLAEEERRRVSERERHNSYKDFQGKVEKETGKLTELHSDKSRLRESLLADGGASAGSGAAGGVDSATGGGGKEKTGAGASSAVDNVDRQLAYLVAQNQ 2641
RED Y P + + TR G+ + ADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGK EKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIK+RTMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEK+RLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGS AFAPADWERHVKNVEKGERKIEEINRLMGAT+SFISKFANPWEQLTFQYTGTQGKVFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSD RFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWHK RQGTERGAGPGGSERL EEERRRV+ERERHNSYKDFQGKVEKETGKLTELH DKSRLRESLLADGGASAGSG AGG DSATGGGGKEKTGAG SSAVDNVDRQLAYLVAQNQ
Sbjct: 624 REDCIDAYNKPDSTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGK----------EKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIKRRTMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEKVRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSTAFAPADWERHVKNVEKGERKIEEINRLMGATRSFISKFANPWEQLTFQYTGTQGKVFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSD-RFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWHK-RQGTERGAGPGGSERLGEEERRRVAERERHNSYKDFQGKVEKETGKLTELHLDKSRLRESLLADGGASAGSGPAGGADSATGGGGKEKTGAGVSSAVDNVDRQLAYLVAQNQ 1209
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA) HSP 1 Score: 557 bits (1435), Expect = 3.050e-176 Identity = 322/558 (57.71%), Postives = 397/558 (71.15%), Query Frame = 2
Query: 896 ERED*ASTYRPPTLSSCTTQIGTRRQGI-----------------DSAADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTD-NAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKASMHPMSSHAEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASY--KEDTFYRQQQAAAIKKR-TMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLFVEAKEKGDLPN--DLTNYEVLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSMAFAPADWERHVKNVEKGERKIEEINRLMGATKSFISKFANPWEQLTFQYTGT-QGKVFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDSRFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWHKSRQG--TERGAGPGGSERLAEEERRRVSERERHNSYKDFQGKVEKETGKLTELHSDKSRLRESLL 2491
+RED Y P S + TR G+ + ADLQAMDRAHRIGQK V+VYR VTENTVEEKVVERAQQKLK+DAMIVQQGRL + N KK K++LL+A+RFGAD VFRSK++SI+D DIDAI+A G EK +E+++ +DKGD+LDF LDGG+ TQ +EGVDYSN+ANR DAG PF +IDTGKRERKK+ SY E +Q+ AAA +KR T +PKHLRLP+MDE QFYD+KRL +L+ EE+L+ +AK++G LP+ D+ +LP L +EK LL++GF+DW+K Y +FVRASAK+GR D+IA EVGK E +V RYA AFW G+ A APA+WERH++NVE+GE+KIEEI+RLM AT++F+++F NPWEQL FQY QGKVFNA EDR+LLCLAH+YGYG WD VKAAIRRS RFRFDYFLRSCSADALGKRCEALM+AAEKE+AEW K R G +ER PG ER EEE R E ER +F+ ++ E KL EL S K + R++ L
Sbjct: 654 DREDFIDAYNRPNSSKFIFMLSTRAGGLGINLQTADTVILYDSDWNPQADLQAMDRAHRIGQKNTVNVYRFVTENTVEEKVVERAQQKLKMDAMIVQQGRLQEQNNKKFSKDELLEAIRFGADSVFRSKESSISDEDIDAILAAG-----------EKRTKEIEARISKADKGDMLDFRLDGGLETQRFEGVDYSNRANRIDAG---APF-YIDTGKRERKKVQSYVSSETQGLQQKAAAAARKRGTRLPKHLRLPKMDEWQFYDRKRLTELNELEEELYAKAKQEGKLPSAADMHALCLLPPDLAAEKAALLAQGFSDWTKPHYQLFVRASAKYGRRHVDKIALEVGKTEAEVARYAAAFWALGATALAPAEWERHLRNVERGEKKIEEISRLMDATRAFVARFRNPWEQLAFQYANAAQGKVFNAPEDRFLLCLAHQYGYGAWDQVKAAIRRS-GRFRFDYFLRSCSADALGKRCEALMRAAEKENAEWEK-RHGASSER---PGERERALEEEXXRAEELERSGKLAEFEQRLRDEARKLAELRSSKQKKRQAAL 1191
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: K8YUK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUK2_NANGC) HSP 1 Score: 445 bits (1145), Expect = 3.100e-136 Identity = 250/502 (49.80%), Postives = 327/502 (65.14%), Query Frame = 2
Query: 896 ERED*ASTYRPPTLSSCTTQIGTRRQGI-----------------DSAADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKASMHPMSSHAEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIK-----KRTMMPKHLRLPRMDEC-QFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSMAFAPADWERHVKNVEKGERKIEEINRLMGATKSFISKFANPWEQLTFQYTGTQGK--VFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDSRFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWHKSRQGTERG 2326
ERE+ TY P S + TR G+ + ADLQA DRAHRIGQKRPV++YRLVT+ T+EEK+VERAQ+KLKLDAM+VQQGRL D K + K++LL+ALRFGAD +FRSKD +ITD DID I+ G+ K +E KL+ +DKGDLLDF +DGG++ QV+EG DYS K + + G Q D GKRER+ S + ++ A K K +PK LRLPR+D+ FYD++RL +L + EE + E K LP+D +E+L L EK RLLSEGF DWS+ + +F RASAK+GR +Y++IA E+GK E++V+RYA+ FW KG + +W++ V +EKGE+K+EEI RL AT+ +S+F NPWE+L+F Y G QGK +++ EDRYLLC + YGYGNW+ V+ AIRR D RFRFDYFLRSC+AD LGKRCE LM+AAEKE+ E+ K R E G
Sbjct: 647 ERENLIDTYNAPNSSKFAFLLSTRAGGLGINLQTADTVILYDSDWNPQADLQAQDRAHRIGQKRPVNIYRLVTQGTIEEKIVERAQKKLKLDAMVVQQGRLQDKDK-MSKDELLEALRFGADVIFRSKDNNITDEDIDLILERGR-----------KRTLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGK-ETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCD-RFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDG 1134
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: A0A7S3HIT7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIT7_9STRA) HSP 1 Score: 442 bits (1137), Expect = 1.470e-135 Identity = 246/493 (49.90%), Postives = 328/493 (66.53%), Query Frame = 2
Query: 896 ERED*ASTYRPPTLSSCTTQIGTRRQGI-----------------DSAADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKASMHPMSSHAEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIK--KRTMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLFVEAKEKGDLPN--DLTNYEVLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSMAFAPADWERHVKNVEKGERKIEEINRLMGATKSFISKFANPWEQLTFQYTGTQGKVFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDSRFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWHKSRQ 2311
+RED + + P + TR G+ + ADLQA DRAHRIGQK+PV V+RLVT+ TVE KVVERAQQKLKLDAM+VQQGRL D KK+ K+ LLD LRFGADK+FRSKD++I+DADID I+ G+ M+ KLQ +DKGD+ DF LDGG+ATQV+EGVDYS K R F F+D GKRERK +A+Y E +A A+ KR +P+HLRL +M++ QF+DK RL L +E +LF E+G+ P ++ + VLP L EK +L++ GF DW+K + FVRASAKHGR +++IA +VG+ ++ +RY++AFWE+G+ ADWER K +EKGE+++EEI RL AT I+ F +PWE+LTF+ G QG++FNA EDR+LLCL H +GYG+WD V+ ++RR + RFRFD++L+SCSADALGKRCE LM++AE+E E + RQ
Sbjct: 327 DREDRIADFNRPDSDKFIFVLSTRAGGLGINLQTADTVILYDSDWNPQADLQAQDRAHRIGQKKPVQVFRLVTDETVEVKVVERAQQKLKLDAMVVQQGRLQDKEKKMTKQDLLDTLRFGADKIFRSKDSTISDADIDLILEEGRKRTEEMT------------KLQTNDKGDMYDFKLDGGMATQVFEGVDYSTKDARERELLAQSAF-FLDPGKRERKGVANYSETAT----RAPALDEDKRPKLPRHLRLNKMEDWQFFDKARLTDLQAEEIRLFDIIAERGEAPQAGNIGKFVVLPPELHEEKTQLVAAGFGDWTKVHFNNFVRASAKHGRSEFEKIAKDVGRPVEETKRYSQAFWERGAAELPAADWERITKQIEKGEKRLEEIGRLTSATAKLITMFEDPWEELTFRNVGNQGRIFNAVEDRFLLCLTHLHGYGSWDQVRNSVRRCE-RFRFDFYLQSCSADALGKRCELLMRSAERELLEIERKRQ 801
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: A0A4D9CV79_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV79_9STRA) HSP 1 Score: 448 bits (1152), Expect = 6.610e-135 Identity = 251/502 (50.00%), Postives = 328/502 (65.34%), Query Frame = 2
Query: 896 ERED*ASTYRPPTLSSCTTQIGTRRQGI-----------------DSAADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKASMHPMSSHAEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIK-----KRTMMPKHLRLPRMDEC-QFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSMAFAPADWERHVKNVEKGERKIEEINRLMGATKSFISKFANPWEQLTFQYTGTQGK--VFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDSRFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWHKSRQGTERG 2326
ERE+ TY P S + TR G+ + ADLQA DRAHRIGQKRPV++YRLVT+ T+EEK+VERAQ+KLKLDAM+VQQGRL D K + K++LL+ALRFGAD +FRSKD +ITD DID I+ G+ K +E KL+ +DKGDLLDF +DGG++ QV+EG DYS K + + G Q D GKRER+ S + ++ A K K +PK LRLPR+D+ FYD++RL +L + EE + E K LP+D +E+L L EK RLLSEGF DWS+ + +F RASAK+GR +Y++IA E+GK E++V+RYA+ FW KG + +W++ V +EKGE+K+EEI RL AT+ +S+F NPWE+L+F Y G QGK +++ EDRYLLC + YGYGNW+ V+ AIRR D RFRFDYFLRSC+AD LGKRCE LM+AAEKE+ E+ K RQ E G
Sbjct: 629 ERENLIDTYNAPNSSKFAFLLSTRAGGLGINLQTADTVILYDSDWNPQADLQAQDRAHRIGQKRPVNIYRLVTQGTIEEKIVERAQKKLKLDAMVVQQGRLQDKDK-MSKDELLEALRFGADVIFRSKDNNITDEDIDLILERGR-----------KRTLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGK-ETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAGEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCD-RFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRQAVEDG 1116
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: A0A7S2F963_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F963_9STRA) HSP 1 Score: 415 bits (1066), Expect = 1.170e-130 Identity = 233/436 (53.44%), Postives = 299/436 (68.58%), Query Frame = 2
Query: 989 ADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKASMHPMSSHAEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANR-ADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQ--QAAAIKKRTMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSMAFAPADWERHVKNVEKGERKIEEINRLMGATKSFISKFA-NPWEQLTFQYTGTQGKVFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDSRFRFDYFLRSCSADALGKRCEALMKAAEKE 2284
ADLQA DRAHRIGQK PV VYRLVTE+++EEKVVERA QKLKLDAM+VQQGRL D KKL KE +L A++FGAD VFR+ DTSITD DIDAI+ G+ +KT L KL+ + KGD+LDF LDG + TQVYEGVDYS+ NR ++ V Q KR+RK + +Y ED +YR+Q ++ ++ MPKHLRLP+M+E QFYD +L+ LH EE ++E KEK LP + ++L L EK RLLSEGFADW++ ++ F RA+AK+GR + RIA +VGK+E DV +Y+ FWE+G FAP + ER +K VEKGERK E+ RL F+++F+ +P L F+Y GT G V+ EDR+LL K+GYGNWD V+ IR+ + +F FDYFLRS S+DALGKRCE LM+ A KE
Sbjct: 21 ADLQAQDRAHRIGQKHPVHVYRLVTESSIEEKVVERAHQKLKLDAMVVQQGRLQDKEKKLSKEDMLAAIKFGADHVFRANDTSITDEDIDAIIERGQ----------KKTSDLF-GKLEEASKGDVLDFKLDGSMPTQVYEGVDYSDSKNRQSNLAELMVLDQATADDKRQRKPVTNYNEDAYYRKQINVGSSDARKVKMPKHLRLPKMEEWQFYDTDKLQSLHALEEARYMELKEKKALPPSIKTLQLLSNEELLEKTRLLSEGFADWTRQHFVNFQRAAAKYGREDFHRIAIDVGKSEADVRKYSPIFWEQGPKVFAPQEMERILKLVEKGERKRSEVERLTAGCSKFLNRFSPSPKSTLAFRYVGTHGHVYGVDEDRHLLVYTDKHGYGNWDKVRDEIRK-EPKFIFDYFLRSLSSDALGKRCETLMREACKE 444
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: A0A4Q3BVS4_9BACT (DEAD/DEAH box helicase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BVS4_9BACT) HSP 1 Score: 396 bits (1017), Expect = 5.780e-126 Identity = 209/329 (63.53%), Postives = 238/329 (72.34%), Query Frame = 1
Query: 1 EERASLVEERLR-VGHNDRDWDVA-------NLEKRSLQNIAWRYLIIDEAHRLKNEASMFSQTVRSFNMQHRLLLTGTPLQNNLHELWALLNFLLPDVFSSSEQFDQVLTKNVNLKTTLGQTHIHVLCAPLPAVSSRHRQNKTKRYLCVSKNDSNQAGLSSKQKEVYRNVLLRDIDMVNGTGGGGNA-GRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLIINCGKMVLLDKLLKKLFDKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPDSTKFVFMLSTRAGGLGINLQTADTVILYDSDW 960
+ER ++ ERLR RDWDV NLEK +L IAWRYLIIDEAHRLKNEAS FSQTVR N QHRLLLTGTPLQNNLHELWALLNFLLPDVF+SSEQFD +V+ T Q I L L R + + L G+S+ QK +YR +LLRDID +N G + RT ILNIVMQLRKCCNHPYLF VEDR LDPLGDHL NCGKMVL+DKLL+K+ ++GHRVLIF+QMT+MLDI ED+ + R Y YCRIDGNTSYE RED I+ +N+P+S KFVF+LSTRAGGLGINLQTADTVILYDSDW
Sbjct: 121 DERQEIINERLRPAAQGIRDWDVVVTTYEVLNLEKGALMKIAWRYLIIDEAHRLKNEASQFSQTVRLLNTQHRLLLTGTPLQNNLHELWALLNFLLPDVFASSEQFDDWFNLDVD-DTAAKQRMISQLHKLLRPFMLRRLKADVESSLPPKSETILFTGMSTLQKTLYRQILLRDIDTINSAGSSNSQQSRTAILNIVMQLRKCCNHPYLFPSVEDRSLDPLGDHLFANCGKMVLMDKLLRKMKERGHRVLIFSQMTRMLDIMEDYLISRDYRYCRIDGNTSYEEREDRIEDFNRPNSDKFVFILSTRAGGLGINLQTADTVILYDSDW 448
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: B8C4D6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4D6_THAPS) HSP 1 Score: 398 bits (1023), Expect = 3.140e-120 Identity = 241/501 (48.10%), Postives = 311/501 (62.08%), Query Frame = 2
Query: 896 ERED*ASTYRPPTLSSCTTQIGTRRQGI-----------------DSAADLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVERAQQKLKLDAMIVQQGRLTDNAKKLGKEQLLDALRFGADKVFRSKDTSITDADIDAIMAHGKASMHPMSSHAEKTKALMESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAA--------IKKRTMMPKHLRLPRMDECQFYDKKRLEQLHRKEEQLF------VEAKEKGDLPNDLTNYEVLPEPLLS-----EKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFW--EKGSMAFAPADWERHVKNVEKGERKIEEINRLMGATKSFISKFANPWEQLTFQYTGTQGKVFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDSRFRFDYFLRSCSADALGKRCEALMKAAEKE 2284
+RE+ Y P + TR G+ + ADLQA DRAHRIGQKR V V+R+VTE+T+E+KVVERAQQKLKLDAM+VQQGRL D K L +E+LLDA+RFGADK+F+SKD+SITD DID I+ +G A+KT+ L + KLQ + KGD+LDF LDGG++ Q +EG+DYS +A A A +D GKRER+ +A Y E+ Y QQ A +KK +PK RLPRM+E Q +D+ L L EEQ F ++ ++G+ + PLLS EK RLL+EGFADWS+ Y FV+ASAK+GR Y +IA +VGK V+ YA+AFW E G F+ + +R VK +EKGE++IE++ L TK IS F NPW +L F + + K F A EDR+LLC AHKYGYG W+ +K AIRRS S FRFDYFL+S DA+G+RCE LM+AAEKE
Sbjct: 507 DREERIDEYNKPDSEKFLFLLSTRAGGLGINLQTADVVILFDSDWNPQADLQAQDRAHRIGQKRTVQVFRIVTEDTIEQKVVERAQQKLKLDAMVVQQGRLKDKDK-LSREELLDAVRFGADKIFKSKDSSITDDDIDIILGYG----------AKKTQELND-KLQAAQKGDMLDFKLDGGLSAQTFEGIDYSEEAKNAQFQ--AEILGIMDVGKRERRTVA-YNENQLYMQQMAQQGANPPKKKVKKEIKLPKMFRLPRMEEWQMFDRDSLNALQEVEEQAFRALPEDIQETKEGEAEEKVEPESKEMPPLLSDEQKVEKARLLAEGFADWSRHHYSSFVKASAKYGRTNYAKIAIDVGKPVSAVKTYAEAFWNEEFGKKRFSEHEHDRVVKLIEKGEKRIEDVKGLQRGTKILISLFENPWVELQFTHVNCKDKKFTADEDRFLLCWAHKYGYGQWEAIKFAIRRS-SNFRFDYFLKSLPPDAIGRRCEQLMRAAEKE 991
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: B8BXR2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXR2_THAPS) HSP 1 Score: 385 bits (988), Expect = 1.770e-118 Identity = 205/347 (59.08%), Postives = 250/347 (72.05%), Query Frame = 1
Query: 1 EERASLVEERLRVGH-------NDRDWDV-------ANLEKRSLQNIAWRYLIIDEAHRLKNEASMFSQTVRSFNMQHRLLLTGTPLQNNLHELWALLNFLLPDVFSSSEQFDQVLTKNVN----LKTTLGQTHIHVLCAP-----LPAVSSRHRQNKTKRYLCVSKNDSNQAGLSSKQKEVYRNVLLRDIDMVNGTGGGGNAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLIINCGKMVLLDKLLKKLFDKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPDSTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 972
EER +L EE + G N R WDV AN E+++L AW+YL+IDEAHRLKNEAS+FS TVR+FN HRLLLTGTPLQNNLHELWALLNFLLPD+FSSSEQFD+ ++ KT + Q +H + P L + ++ KT+ L V G+S QK++Y+ +LLRDI+ + TG ++G+T ILNIVMQLRKCCNHPYLF GVEDR LDPLG+HL+ NCGK+ ++DKLLK+L ++G RVLIFTQMT++LDI ED+ VMR Y+YCRIDGNT YE RE ID +N P+S KF F+LSTRAGGLGINLQTADT ILYDSDWNPQA
Sbjct: 101 EEREALSEENEKTGEMEDDNSDNPRAWDVCVTTYEVANTERKALGRFAWKYLVIDEAHRLKNEASIFSTTVRNFNTSHRLLLTGTPLQNNLHELWALLNFLLPDIFSSSEQFDEWFNLEIDDADAKKTMIEQ--LHKILRPFMIRRLKSDVAKGLPPKTETLLMV--------GMSKMQKQLYKKLLLRDIEAI--TGKNTSSGKTAILNIVMQLRKCCNHPYLFEGVEDRTLDPLGEHLVENCGKLNMVDKLLKRLKERGSRVLIFTQMTRILDILEDYMVMRGYKYCRIDGNTDYEDRERGIDEFNAPNSEKFCFILSTRAGGLGINLQTADTCILYDSDWNPQA 435
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Match: W7TKM9_9STRA (Putative chromatin remodelling complex atpase chain (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKM9_9STRA) HSP 1 Score: 386 bits (992), Expect = 2.080e-118 Identity = 204/338 (60.36%), Postives = 238/338 (70.41%), Query Frame = 1
Query: 1 EERASLVEERLRVGHNDRDWDV-------ANLEKRSLQNIAWRYLIIDEAHRLKNEASMFSQTVRSFNMQHRLLLTGTPLQNNLHELWALLNFLLPDVFSSSEQFDQVLTKNVNLKTTLGQ--THIHVLCAP-----LPAVSSRHRQNKTKRYLCVSKNDSNQAGLSSKQKEVYRNVLLRDIDMVNGTGGGGNAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLIINCGKMVLLDKLLKKLFDKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPDSTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 972
+ERA L+ ERL G +RDWDV NLEK +L AW+YLIIDEAHRLKNEAS FSQTVR HRLL+TGTPLQNNLHELWALLNFLLPDVFSSS+QFD ++ + T +H + P L A + KT+ + + Q++ Y+ +L RD+ ++ G AGRT +LN+VMQLRK CNHPYLF GVEDR LDPLGDH+I NCGKM LLDKLLKKL +KGHRVL+F QMT+MLDI EDF MR + YCRIDGNTSYE RE+ ID YN P+S+KF F+LSTRAGGLGINLQTADTVILYDSDWNPQA
Sbjct: 352 DERADLIAERLSPG-TERDWDVLLTTYEICNLEKGALSKFAWQYLIIDEAHRLKNEASQFSQTVRMLKTAHRLLITGTPLQNNLHELWALLNFLLPDVFSSSDQFDDWFNLEIDDAEQKQRLITQLHKILRPFMLRRLKADVEKSLPKKTETLVFCE--------MMPTQRDTYKKILERDLSVI---AGSETAGRTAVLNLVMQLRKACNHPYLFTGVEDRTLDPLGDHVIKNCGKMYLLDKLLKKLKEKGHRVLVFCQMTRMLDILEDFMYMRGHSYCRIDGNTSYEERENLIDTYNAPNSSKFAFLLSTRAGGLGINLQTADTVILYDSDWNPQA 677 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1576.4244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1576.4244.1 >prot_Ecto-sp13_S_contig1576.4244.1 ID=prot_Ecto-sp13_S_contig1576.4244.1|Name=mRNA_Ecto-sp13_S_contig1576.4244.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=276bp MFSQTVRSFNMQHRLLLTGTPLQNNLHELWALLNFLLPDVFSSSEQFDQVback to top mRNA from alignment at Ecto-sp13_S_contig1576:328..16174- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1576.4244.1 ID=mRNA_Ecto-sp13_S_contig1576.4244.1|Name=mRNA_Ecto-sp13_S_contig1576.4244.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=15847bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1576:328..16174- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1576:328..16174- >mRNA_Ecto-sp13_S_contig1576.4244.1 ID=mRNA_Ecto-sp13_S_contig1576.4244.1|Name=mRNA_Ecto-sp13_S_contig1576.4244.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=828bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1576:328..16174- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |