prot_Ecto-sp13_S_contig15759.4243.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15759.4243.1
Unique Nameprot_Ecto-sp13_S_contig15759.4243.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15759.4243.1 vs. uniprot
Match: D7FLT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT4_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 1.120e-109
Identity = 166/172 (96.51%), Postives = 166/172 (96.51%), Query Frame = 0 
Query:    1 MSISKRDVSREVESVFTALAKARVRKDMDPEVLKSSQYLDRKLEAHLKLDWYNEQAVKSEARRQANQPPDWICLLLQRDRDARRAWQLLKAVQTSGWGGSSSKPKPAKGQLQNPEKLELVDSAALAESKLELQEERAAQGLSKEPTPSFEVEEVDDWETLDDLPGGEPTEAA 172
            MSISKRDVSREVESVFTALAKARVRKDMDPEVLKSSQYLDRKLEAHLKLDWYNEQAVKSEARRQANQPPDWICLLLQRDRDARRAWQLLKAVQTSGWGGSSSKPKPAKGQLQNPEK   VDSAALAESKLELQEERAAQGLS EPTPSFEVEEVDDWETLDDLPG EPTE A
Sbjct:    1 MSISKRDVSREVESVFTALAKARVRKDMDPEVLKSSQYLDRKLEAHLKLDWYNEQAVKSEARRQANQPPDWICLLLQRDRDARRAWQLLKAVQTSGWGGSSSKPKPAKGQLQNPEKEAYVDSAALAESKLELQEERAAQGLSNEPTPSFEVEEVDDWETLDDLPGDEPTETA 172
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15759.4243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT4_ECTSI1.120e-10996.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15759contigEcto-sp13_S_contig15759:596..4045 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15759.4243.1mRNA_Ecto-sp13_S_contig15759.4243.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15759 596..4045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15759.4243.1 ID=prot_Ecto-sp13_S_contig15759.4243.1|Name=mRNA_Ecto-sp13_S_contig15759.4243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
MSISKRDVSREVESVFTALAKARVRKDMDPEVLKSSQYLDRKLEAHLKLD
WYNEQAVKSEARRQANQPPDWICLLLQRDRDARRAWQLLKAVQTSGWGGS
SSKPKPAKGQLQNPEKLELVDSAALAESKLELQEERAAQGLSKEPTPSFE
VEEVDDWETLDDLPGGEPTEAA*
back to top