prot_Ecto-sp13_S_contig1574.4234.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1574.4234.1
Unique Nameprot_Ecto-sp13_S_contig1574.4234.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length261
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1574.4234.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 2.160e-113
Identity = 190/213 (89.20%), Postives = 196/213 (92.02%), Query Frame = 0 
Query:   12 GTRSTPFVVGQAPMPVAPESLKVKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDINDARDTDLFAKMAAAAKLTEARVNAEEGSRDPKGGATTAGRASSTSAATTQESRNGADSAAAGVGAQGKPRGSSRQGRGRGHAEEDAKSEFARMAQTLRQQSGTTGVGGKQPAAMDVDSDDDEEETVTLEGEFKSAEGMPQVSTGSKGAADKDGPEDM 224
            GTRSTPFVVGQAPMPVAPESLKVKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDINDARDTDLFAKMAAAAKLTEARVNAEEGSRDPKG ATTAGRASS SA T QE R G DSAAAGVGA+ KPR S+RQG G GHAEEDAKSEFARMAQTLRQQSGT GVG KQPAAMDVDSDD+EEETVTLEGEFKSAE +P+ STGS G ADKDGP+DM
Sbjct:  343 GTRSTPFVVGQAPMPVAPESLKVKHLDYDDLHVTQGIREEGLRGGGNRGGRGLDINDARDTDLFAKMAAAAKLTEARVNAEEGSRDPKGRATTAGRASSKSAVTIQEGRYGTDSAAAGVGAERKPRRSTRQGGGEGHAEEDAKSEFARMAQTLRQQSGTKGVGRKQPAAMDVDSDDEEEETVTLEGEFKSAEEVPRASTGSGGVADKDGPKDM 555
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1574.4234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KDM4_9PHAE2.160e-11389.20RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1574contigEcto-sp13_S_contig1574:12953..15651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1574.4234.1mRNA_Ecto-sp13_S_contig1574.4234.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1574 12600..16045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1574.4234.1 ID=prot_Ecto-sp13_S_contig1574.4234.1|Name=mRNA_Ecto-sp13_S_contig1574.4234.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp
MVQGKIPTTLPGTRSTPFVVGQAPMPVAPESLKVKHLDYDDLHVTQGIRE
EGLRGGGNRGGRGLDINDARDTDLFAKMAAAAKLTEARVNAEEGSRDPKG
GATTAGRASSTSAATTQESRNGADSAAAGVGAQGKPRGSSRQGRGRGHAE
EDAKSEFARMAQTLRQQSGTTGVGGKQPAAMDVDSDDDEEETVTLEGEFK
SAEGMPQVSTGSKGAADKDGPEDMDNDDDDDDDDDLLSAVKKGKGRGRGK
GKAKGKRGKA*
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