prot_Ecto-sp13_S_contig1574.4233.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1574.4233.1
Unique Nameprot_Ecto-sp13_S_contig1574.4233.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length272
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1574.4233.1 vs. uniprot
Match: A0A6H5KJ58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ58_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.200e-52
Identity = 134/262 (51.15%), Postives = 138/262 (52.67%), Query Frame = 0 
Query:   77 MFSSGSEASPRNDRDYGRGTSSVTSTMDDAFESSGTAVKAGGPLMSPVLRTLASSGSGLAEGMMMPVEEVPILPDHAGDTGGLVVAALGAAGRGH------------------------------------------------------------------------GSSGSSSGSPSRVR-------------------------------RRGRLLSEEPENDDASETGKGNKRRHAPPTPKHRVLSGAWGKLAAPERPA 235
            MFSSGSE SPRN RDYGRGTSSVTSTMDDAFES+GT V+A GPLMSPVLRTLAS+GSGLAEGMMMPVEEVPILPD AGDT GLVVAAL AAGRG                                                                         G      G P R +                               RRGR LSEEPENDDAS T KGNKRRHAPPTP HRVLSGAWGKLAAPERPA
Sbjct:    1 MFSSGSEGSPRNGRDYGRGTSSVTSTMDDAFESTGTVVRADGPLMSPVLRTLASAGSGLAEGMMMPVEEVPILPDPAGDTKGLVVAALRAAGRGQQFVPLEPPDMEAPRSTAARAHHGRGRLKQQXXXXXXXXXSDMSETSENAEGGAHLTGGLPLPVDSVGPGVPDGGVDGRRGFPQRKKKTSNIGGXXXXXXXXXXXXXXXXXXXXXXXXRRGRPLSEEPENDDASATVKGNKRRHAPPTPNHRVLSGAWGKLAAPERPA 262
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1574.4233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ58_9PHAE1.200e-5251.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1574contigEcto-sp13_S_contig1574:9599..10729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1574.4233.1mRNA_Ecto-sp13_S_contig1574.4233.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1574 9597..10729 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1574.4233.1 ID=prot_Ecto-sp13_S_contig1574.4233.1|Name=mRNA_Ecto-sp13_S_contig1574.4233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=272bp
FESGGIETQPALESDGRASALDQRTSCSTPSAKLDAGIPDLRRARQSEAL
TARGAAATNPNTNSLLALSSPNLHQRMFSSGSEASPRNDRDYGRGTSSVT
STMDDAFESSGTAVKAGGPLMSPVLRTLASSGSGLAEGMMMPVEEVPILP
DHAGDTGGLVVAALGAAGRGHGSSGSSSGSPSRVRRRGRLLSEEPENDDA
SETGKGNKRRHAPPTPKHRVLSGAWGKLAAPERPAAAAANEEQGGREEQG
KDDCATSCGSRSSSEFTSNSNE
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