prot_Ecto-sp13_S_contig15730.4227.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15730.4227.1
Unique Nameprot_Ecto-sp13_S_contig15730.4227.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length382
Homology
BLAST of mRNA_Ecto-sp13_S_contig15730.4227.1 vs. uniprot
Match: A0A6H5KA22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA22_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 1.050e-128
Identity = 188/199 (94.47%), Postives = 191/199 (95.98%), Query Frame = 0
Query:  184 GHAATEDVEVARLRRDLETEHTRRVKAETLIHKSSGSGLRPGAFPGVRDVYQHVGHLADDALAWTEKAFVVGGSRQAWYRTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRNYRTIVSTEPDRMDELAELILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEV 382
            G+ ATEDVEV RLRRDLETEHTRRVKAETLIH+SSG GLRPGAFPGVRDVYQHVGHLADDALAWTEKAF VGGSRQAWY TTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCR YRTIVSTEPDRMDELA LILQRCGEPADRGLANEI SGATWPSFEALMKNYLLVFVE+
Sbjct:   59 GYGATEDVEVDRLRRDLETEHTRRVKAETLIHRSSGGGLRPGAFPGVRDVYQHVGHLADDALAWTEKAFAVGGSRQAWYGTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRKYRTIVSTEPDRMDELAGLILQRCGEPADRGLANEIMSGATWPSFEALMKNYLLVFVEM 257          
BLAST of mRNA_Ecto-sp13_S_contig15730.4227.1 vs. uniprot
Match: D7FSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP1_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 1.650e-122
Identity = 181/199 (90.95%), Postives = 184/199 (92.46%), Query Frame = 0
Query:  184 GHAATEDVEVARLRRDLETEHTRRVKAETLIHKSSGSGLRPGAFPGVRDVYQHVGHLADDALAWTEKAFVVGGSRQAWYRTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRNYRTIVSTEPDRMDELAELILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEV 382
            GH ATEDVEV RLRRDL+TEHTRRV AETLIH+SSG GLRPG FP V DVYQHVGHLADDALAWTEKAF VGGSRQ WY TTRSVLYNTFLVCREEVQRCLDERLQ LSAFLGN EPILLSAGDEKSLD QYVLYECLCR YRTIVSTEPDRMDELA LILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVE+
Sbjct:  109 GHGATEDVEVGRLRRDLDTEHTRRVNAETLIHRSSGGGLRPGVFPSVGDVYQHVGHLADDALAWTEKAFAVGGSRQTWYGTTRSVLYNTFLVCREEVQRCLDERLQILSAFLGNAEPILLSAGDEKSLDPQYVLYECLCRKYRTIVSTEPDRMDELARLILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEM 307          
BLAST of mRNA_Ecto-sp13_S_contig15730.4227.1 vs. uniprot
Match: D7FSP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP0_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 5.020e-100
Identity = 156/196 (79.59%), Postives = 169/196 (86.22%), Query Frame = 0
Query:  187 ATEDVEVARLRRDLETEHTRRVKAETLIHKSSGSGLRPGAFPGVRDVYQHVGHLADDALAWTEKAFVVGGSRQAWYRTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRNYRTIVSTEPDRMDELAELILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEV 382
            A  +VE+ RLRRDLETEHTRRVKAETL+H++ G GLR G FP VRDVYQHV  LADDALAWTEKA  VGGS  A   T  SVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDE +LDTQYVLYECLC++Y+ IV  +PDRMD LA ++LQRCGEPADR LANEI SGATWPSFEALMKNYLLVFVE+
Sbjct:  258 ANTEVELGRLRRDLETEHTRRVKAETLVHRAKGGGLRSGDFPSVRDVYQHVYQLADDALAWTEKACAVGGSHPALNGTVLSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMDALAGVVLQRCGEPADRSLANEILSGATWPSFEALMKNYLLVFVEM 453          
BLAST of mRNA_Ecto-sp13_S_contig15730.4227.1 vs. uniprot
Match: A0A6H5KFA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFA2_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 3.010e-96
Identity = 148/196 (75.51%), Postives = 165/196 (84.18%), Query Frame = 0
Query:  187 ATEDVEVARLRRDLETEHTRRVKAETLIHKSSGSGLRPGAFPGVRDVYQHVGHLADDALAWTEKAFVVGGSRQAWYRTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRNYRTIVSTEPDRMDELAELILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEV 382
            A  +VE+ RLRRDLETEH+RRVKAETL+H++ G GLR G FP VRDVYQHV  LADDALAWTEKA  VGGS  A   T  SVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDE +LDTQYVLYECLC++Y+ IV  +PDRM+ LA ++L+RC EPAD  LANEI SG  WPSFEALMKNYL+VFVE+
Sbjct:   88 ANTEVELGRLRRDLETEHSRRVKAETLVHRAKGGGLRSGDFPSVRDVYQHVYQLADDALAWTEKACAVGGSHPAVNGTILSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMNALAGVVLRRCEEPADESLANEIISGPAWPSFEALMKNYLMVFVEM 283          
BLAST of mRNA_Ecto-sp13_S_contig15730.4227.1 vs. uniprot
Match: D7FRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD0_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 6.400e-46
Identity = 100/207 (48.31%), Postives = 126/207 (60.87%), Query Frame = 0
Query:  190 DVEVARLRRDLETEHTRRVKAE--------------TLIHKSSGSGLRPGA-FPGVRDVYQHVGH-LADDALAWTEKAFVVGGSRQAWYRTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRNYRTIVSTEPDRMDELAELILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFV 380
            D E+  LR+ + TE +RR  AE              +L+ +S   G+RPG  FP VR V Q + H L DDAL WTEK   +GGS+     T R+VL +TF VCR+E  RCLD RL+  +  LG DEPI LS     +LDT+YVLY CLCRNY+TIVS +P ++  LA  I+QRC    D  LA  ITSG   P F+ALMK+YL VF+
Sbjct:  104 DAELDTLRKKVATEKSRRELAEADMEAARRQLNAYESLVLRSEVKGVRPGNDFPSVRSVLQEIKHGLIDDALRWTEKVSTLGGSQAGLTATIRAVLEHTFHVCRKEAMRCLDNRLRAFTECLGEDEPISLSGDKSMNLDTEYVLYTCLCRNYKTIVSMKPSQVQNLAVTIVQRCKGHED--LAGSITSGNARPFFDALMKHYLQVFI 308          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15730.4227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KA22_9PHAE1.050e-12894.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSP1_ECTSI1.650e-12290.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSP0_ECTSI5.020e-10079.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFA2_9PHAE3.010e-9675.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRD0_ECTSI6.400e-4648.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..382
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15730contigEcto-sp13_S_contig15730:759..4088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15730.4227.1mRNA_Ecto-sp13_S_contig15730.4227.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15730 759..4088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15730.4227.1 ID=prot_Ecto-sp13_S_contig15730.4227.1|Name=mRNA_Ecto-sp13_S_contig15730.4227.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
PGKPLTPTPTVLDPTAPTVLNTTAPTMLPTPAPTVLNTTAPTMLPTPAPT
VLNTTAPTMLPTPAPMVQPTPTSTEPTMQPKPDPTEPTMQATPQPTTPIA
DDTLQGDDSTATDDGQPDTDGNTTQEGDDDGAVVATSDASNSESSTTGVV
VLSGILAALVLGNAVWLACCLRRRKRPPTPPAGGHAATEDVEVARLRRDL
ETEHTRRVKAETLIHKSSGSGLRPGAFPGVRDVYQHVGHLADDALAWTEK
AFVVGGSRQAWYRTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEP
ILLSAGDEKSLDTQYVLYECLCRNYRTIVSTEPDRMDELAELILQRCGEP
ADRGLANEITSGATWPSFEALMKNYLLVFVEV
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