mRNA_Ecto-sp13_S_contig15727.4225.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A481ZAY7_9VIRU (HNH endonuclease n=1 Tax=Pithovirus LCPAC304 TaxID=2506594 RepID=A0A481ZAY7_9VIRU) HSP 1 Score: 176 bits (446), Expect = 7.420e-44 Identity = 109/292 (37.33%), Postives = 156/292 (53.42%), Query Frame = 2
Query: 860 ITMWLPIAKHRGYEAS-TCGRIRNAKTLRVLKQHTGIRGYKRISL-----NRHTRSVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERTEKIHLFPSIREAARHVSRN-----KTASNWILHAMRGRKRKDGTLSFVAFGFSWVYED--EVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKHGRVSEPFGEENDYSWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYN 1696
+ +W YEAS T G+IRN T + + + GY RI + T+S+HRL+A TFLSNP K +NH+DH++ NN +ENLE+ T+ E NRHKK P R +R +W P+ +K+ + +I+ A + + N K I RK G +S A+GF W Y+ E + + EVWKP+ P V G+ Y +S GRV+N+ GR+++ + N Y SV S Y +HRL+ + F+ N NK V+H DGDK N + NL WCT S N
Sbjct: 126 LVIWKSPQDFSMYEASNTTGKIRNRLTKKSMSLTSDNSGYIRIKIINDNGKSKTQSLHRLVAMTFLSNPNNKPTVNHKDHNKLNNNVENLEWATSVEQNRHKKKCNPEQRQLAGSRAVWRIDPITG-----KKLQRYETIKFAGKWLIDNEDVKSKRPETAISKICGETARKTGYISKTAYGFKWEYDTNAETKYENEVWKPIPPNLVDGSERYQMSDMGRVKNRTGRIADGWIAVNGYRKVSVGSHPYSLHRLMVQVFLPNIYNKPHVNHKDGDKTNAKLYNLEWCTRSEN 412
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A481Z8L2_9VIRU (HNH endonuclease n=1 Tax=Pithovirus LCPAC304 TaxID=2506594 RepID=A0A481Z8L2_9VIRU) HSP 1 Score: 176 bits (446), Expect = 1.240e-43 Identity = 113/306 (36.93%), Postives = 164/306 (53.59%), Query Frame = 2
Query: 860 ITMWLPIAKHRGYEAS-TCGRIRNAKTLRVLKQHTGIRGYKRISL-----NRHTRSVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERT-EKIHLFPSIREAARHVSRNKTASNWILHAMRG-----------RKR-------KDGTLSFVAFGFSWVYE--DEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKHGRVSEPFGEENDYSWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYN 1696
+ +W YE S T G+IRN T ++L + GY R+ + R TR++HRL+A FL N K +NH+DH++ NN +ENLE+ T E NRHK+ P + S+R +W D+ T EK+ + +I AA+ + NK S I + RG RKR K+ + A+GF W Y+ E + + E+WKP+ P V G TGY +S GRV+N GR++E + N+Y W ++ + Y +H L+A+ F+ N NK IV+H DGDK N + NL WCTYS N
Sbjct: 135 LVIWKSPKNFLMYEVSDTTGKIRNKMTKKMLSIKSCNGGYIRVCVYNDNGKRKTRALHRLVAIAFLPNLNNKPTVNHKDHNKVNNNVENLEWATVTEQNRHKRKCKPERQQLVSSRVVWRL------DKLTGEKLQRYETITLAAKWIFDNKLTS--IKNFNRGNNIKTRICAVCRKRIETRKGDKNAYMRKTAYGFKWEYDISKETKYENELWKPIPPNLVKGVTGYQISDMGRVKNHKGRITEGHHKPNNYRWVNIHPKQYTLHILMAQVFLPNIYNKPIVNHKDGDKTNAKLYNLEWCTYSEN 432
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A6C0AQY9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AQY9_9ZZZZ) HSP 1 Score: 140 bits (352), Expect = 1.300e-32 Identity = 95/281 (33.81%), Postives = 152/281 (54.09%), Query Frame = 2
Query: 866 MWLPIAKHRGYEASTCGRIRNAKTLRVLK--QHTGIRGYKRISLNRHTRSVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERTEKIHLFPSIREAARHVSRNKTASNWILHAMRGR-KRKDGTLSFVAFGFSWVYEDEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKHGRVSEPFGEEND-YSWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYN 1696
+W +A + YE ST G +RN KT R+LK + G + ++ T HRL+AETF+ NPE K +NH+D + NN + NLE+ T KENN HK + + A IW R + D+R EK + SI A++ + + N +H+++ + +FGF W + + ++ E+WK ++ + T+GY +SS GR +NK G + + + + Y + V + Y +HRLV +F++N +NK V+H+DG+K N + NL W T S N
Sbjct: 6 VWKDLANYDKYEVSTFGNVRNKKTDRILKPANNGGYLYFGLSNIKTKTFPAHRLVAETFIENPENKAHVNHKDKNGLNNHLSNLEWNTPKENNIHKSVGVTQTTNQNLA--IW--RVDLNSDKRIEK---YNSIDLASKWLFEQGVSEN--IHSIKSSISCSIRGVYKCSFGFKWELDKDENLENEIWKEINTEN-EDTSGYYISSLGRFKNKKGVIMKDYKPHHSGYIYLRVNIKKYALHRLVGLSFIENIENKPFVNHIDGNKLNNNSENLEWVTCSEN 276
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A481YPW7_9VIRU (HNH endonuclease n=1 Tax=Iridovirus LCIVAC01 TaxID=2506607 RepID=A0A481YPW7_9VIRU) HSP 1 Score: 139 bits (351), Expect = 1.840e-32 Identity = 103/287 (35.89%), Postives = 155/287 (54.01%), Query Frame = 2
Query: 872 LPIAKHRGYEASTCGRIRNAKTLRVLKQHTGIRGYKRISLNRHTR----SVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERTEKIHLFPSIREAARHVSRNKTASNWILHAMRGRKRKDGTLSFVAFGFSWVYEDEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKHGRVSEPFGEENDY------SWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYNTK 1702
+PI + Y+ S GRIRN KT R+LK+ GY+ I L H+R SVHRL+A+ F+ NP +NH+D +R NN++ENLE+ T N +H + +G KR R +W R + +E +F SI+EAA+ + S+ I + G+++ G G+ W Y +E +IK E K + + + G T Y++ + G++ +K ++ N Y + NS+ + QIH LVAK F DN NK IV+H DG+K N +NL W T+S NTK
Sbjct: 12 IPIPGNEKYQISNLGRIRNEKTKRILKKRLRTDGYEEIRLQIHSRKTSHSVHRLVAQAFIPNPNDFPQVNHKDKNRANNRVENLEWATRSMNMKHS---IETG-AKRYKRAVWR-RDLEGGNE-----VIFNSIKEAAKVTECD---SSSISKCVNGKQKTAG-------GYEWGYIEE-KIKEEARKDIASIEIKGYTKYLIYNNGQIYSKKRKIYLKPSISNGYYRIALSNDNSIITNQ-QIHILVAKYFCDNFDNKPIVNHQDGNKLNNHYTNLEWVTHSENTK 276
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A481YQR5_9VIRU (HNH endonuclease n=1 Tax=Iridovirus LCIVAC01 TaxID=2506607 RepID=A0A481YQR5_9VIRU) HSP 1 Score: 136 bits (342), Expect = 3.420e-31 Identity = 112/330 (33.94%), Postives = 168/330 (50.91%), Query Frame = 2
Query: 869 WLPIAKHRGYEASTCGRIRNAKTLRVLKQHTGIRGYKRISL----NRHTRSVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERTEKIHLFPSIREAARHVSRNKTASNWILHAMRGRKRKDGTLSFVAFGFSWVYEDEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNK----HGRVSEPFGEENDYSWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYNTK-AYLASKNVKLKNK*IHVCSL--KHYYIIL-TIKGLRGFSVFME 1822
W I K+ Y+ S GRIRN KT R+ K+ + GY++I L + T VHRL+A F+ NP +NH+D ++ NN++ENLE+ T N +H L +G KR R +W C D ++ +F SI EAA A+ + ++ +++GT A GF W Y +E RIK E K + + Y++ + G+V ++ + + S G N R +Q+H LVA+ F DNP+NK IV+H DG+K N +NL W T+S N K A+ N K +K IH + K IIL T +R + F++
Sbjct: 13 WRTIPKNEKYQVSNFGRIRNKKTKRIRKKQITLAGYEKIILFFQNRQETHQVHRLVALAFILNPNNFPQVNHKDINKINNRVENLEWATQSMNIKHS---LENG-AKRYKRAVWRC------DSEGNEV-IFDSITEAAE-------ATGCLKGSIFASIKRNGT----AIGFKWGYVEE-RIKEEARKDIPSREIKDYPRYLIYNNGQVYSRKYKNYLKPSLSIGYYRIALCNDNVRRNHQVHILVAQYFCDNPENKPIVNHRDGNKLNNHYTNLEWVTHSENVKHAHNLGLN-KTASKRIHQYAREDKEKCIILYTFNSIREAAEFLK 318
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A481YSD8_9VIRU (HNH endonuclease (Fragment) n=1 Tax=Iridovirus LCIVAC01 TaxID=2506607 RepID=A0A481YSD8_9VIRU) HSP 1 Score: 133 bits (334), Expect = 3.560e-30 Identity = 105/331 (31.72%), Postives = 164/331 (49.55%), Query Frame = 2
Query: 869 WLPIAKHRGYEASTCGRIRNAKTLRVLKQHTGIRGYKRISL----NRHTRSVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERTEKIHLFPSIREAARHVS-RNKTASNWILHAMRGRKRKDGTLSFVAFGFSWVYEDEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKH-GRVSEPFGEENDYS---WNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYNTK-AYLASKNVKLKNK*IHVCSLKH---YYIILTIKGLRGFSVFME 1822
W+ I K+ YE S +IRN T R+L + GY++I L R VHRL+A+ F+ NPE +NH+D +R NNK+ENLE+ T N +H ++ R + R V D + I F SI+EAA + ++K + I++ + K S+ G+ W Y +E EV K + + + Y++ + G++ +K P YS +N R ++IH LVA+ F +NP NK IV+H DG+K N +NL W TYS N+K AY N ++ + +H +L+ I+ T +R S F++
Sbjct: 10 WITIPKNEKYEVSNLAQIRNKNTKRILSKVIDADGYEKICLYLQNGRKMCLVHRLVAQAFIPNPEDFSEVNHKDKNRANNKVENLEWATRSMNQKH---------AIKTGRNQYKGRAVRQYDLQNNFIKEFSSIKEAAESIKLKSKGVISTIMNGIYATCSKRQKTSY---GYIWRYVEE-----EVRKGIVSFEIKDYSKYLIYNNGQIYSKRRNSYLTPRITNGYYSICLYNDNGKRNHRIHILVAQHFCENPDNKPIVNHKDGNKLNNHCTNLEWVTYSENSKHAYNLGLNKRVSKR-VHQYALEDKDKLVILSTFNSVREASEFLK 322
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A6C0KNX9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KNX9_9ZZZZ) HSP 1 Score: 133 bits (335), Expect = 4.160e-30 Identity = 96/293 (32.76%), Postives = 148/293 (50.51%), Query Frame = 2
Query: 866 MWLPIAKHRGYEASTCGRIRNAKTLRVLKQHTGIRGYKRISLN----RHTRSVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERTEKI-HLFPSIREAARHVSRNKTASNWILHAMRGRKRKDGT---------LSFVAFGFSW-VYEDEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKHGRVSEPFG-EENDYSWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYN 1696
+W P+ + Y S G I+N T + LK + GY +SL + + +HRL+A F+ NPE K +NH+D ++ NN + NLE+MT KENN H+ + K A I+ N + E+I + SI EAA NW ++ + +G LS A+GF W + + ++ E+WK + ++ Y VS+ GR +N G + + + EN Y + +R Y +HRL+A TF++NP+NK V+H+DG+K N R NL W T S N
Sbjct: 4 IWKPVNEFPNYHISCYGNIKNVITNKPLKPNLKS-GYYHVSLVNEIIKKSLKIHRLVALAFIENPENKSDVNHKDKNKLNNNVLNLEWMTRKENNIHRCQGIIISNNKNKA--IYKI--YNEVSKNNEQIVESYNSIEEAA----------NWAFNSGFTKTVHNGRNAIGNCICGLSNSAYGFKWKLINNNEDLENEIWKQVIIENIDDDKKYFVSNLGRFKNSFGIIMDNYKVNENGYIRVFIYNRTYALHRLIALTFIENPQNKEQVNHIDGNKINNRVDNLEWVTNSEN 281
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A6C0ADX3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ADX3_9ZZZZ) HSP 1 Score: 132 bits (333), Expect = 5.780e-30 Identity = 81/241 (33.61%), Postives = 135/241 (56.02%), Query Frame = 2
Query: 1010 VHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERT-EKIHLFPSIREAARHVSRNK-------TASNWILHAMRGRKRKDGTLSFVAFGFSWVYEDEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKHGRV--SEPFGEENDYSWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYNTK 1702
VHRL+A +FL NPE K ++H D R NNK+ENL++ T+ E N ++ G ACR + D+ T EK+ + S+ +A + NK TA+ I A+ ++ FGF W+Y++++ I+GE+WK + + ++G G+ S+ GR++N + S +++DY +K + Y++HRL+A+TF+DNP+NK V+H +G K + R NL + T S N++
Sbjct: 4 VHRLVAISFLKNPENKPTVDHIDRQRINNKVENLKWATSSEQNNNRSYINHKG----------ACRSIWRLDKETGEKLENYKSLIDAGKWSVENKKLIVSINTAAKNISKAVYNKQE--------LFGFKWLYDEKI-IEGEIWKKIPRLFINGAKGFFASNFGRIKNSSSEIFNSSIKDKKDDYVSVGIKGKKYKVHRLIAQTFLDNPENKKFVNHKNGIKNDNRLENLEFVTPSENSR 225
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A481YR98_9VIRU (HNH endonuclease n=1 Tax=Iridovirus LCIVAC01 TaxID=2506607 RepID=A0A481YR98_9VIRU) HSP 1 Score: 132 bits (331), Expect = 1.020e-29 Identity = 104/307 (33.88%), Postives = 158/307 (51.47%), Query Frame = 2
Query: 869 WLPIAKHRGYEASTCGRIRNAKTLRVLKQHTGIRGYKRISLNRHTR----SVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSARPIWACRPVNHPDERTEKIHLFPSIREAARHVSRNKTASNWILHAMRGRKRKDGTLSFVAFGFSWVYEDEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKH------GRVSEPF---GEENDYSWNSVKSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYNTKAYLASKNVKLKNK*IH 1750
W+ I++++ YE S +IRN KT R+LK++ GY+ ISL+ TR SVH+L+A+ F+ NP +NH+D +R NN++ NLE++T N +H + GR R +W P E E I F SI EAA+ V +K + R+ T A F W Y +E RIK E K + + + Y++ + G++ + + R+S + G ND R +++H LVA+ F DNP NK IV+H+DG+K N +NL W TYS N+K +K +K +H
Sbjct: 12 WITISENKNYEVSNLAQIRNEKTKRILKKYIRTDGYEGISLSYTTRGKTYSVHKLVAQAFIPNPNNFPQVNHKDLNRANNRVSNLEWVTQSMNIKHS---VKKGR-NTYKRAVWRRDP-----EGNEVI--FDSITEAAKIVGCSKE------NIFSCISRRTNT----AVSFEWGYVEE-RIKEEARKDIASMEIKDYPYYLIYNNGQIYSDYIKGYLKPRISNGYYRIGLSNDNG-----RRKHRVHILVAQHFCDNPDNKPIVNHIDGNKLNNHYTNLEWVTYSENSKHAHNLGLIKRVSKRVH 291
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Match: A0A6C0AH84_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AH84_9ZZZZ) HSP 1 Score: 129 bits (323), Expect = 3.030e-29 Identity = 93/298 (31.21%), Postives = 143/298 (47.99%), Query Frame = 2
Query: 866 MWLPIAKHRGYEASTCGRIRNAKTLRVLKQHTGIRGYKRISL-----NRHTRSVHRLIAETFLSNPEGKEVINHRDHDRRNNKIENLEYMTTKENNRHKKPYLPSGRVKRSAR--PIWACRPVNHPDERTEKIHLFPSIREAAR----HVSRNKTASNWILHAMRGRKRKDGTLSFVAFGFSWVYE--DEVRIKGEVWKPLDPVHVHGTTGYMVSSEGRVRNKHGRVSEPFGEENDYSWNSV-----KSRAYQIHRLVAKTFVDNPKNKSIVHHVDGDKKNCRASNLVWCTYSYNTKA 1705
+W + Y+ S G++ + + + + GY I+L N+ T VHRLIA TF+ NPE K +NH++H+R +N++ENLE+ T E N KK S + R R P+W C EK+ + I +A + ++ +T S + + KRK A+GF W+++ +E + E+WK + + G GY +S +GR++ G +D + V K R + IHRLVAK F+ N K V+H D DK NC+ NL W T N A
Sbjct: 4 IWRELEGFSKYKFSNTGKVWSKSSNKEMFLKAKCTGYVVITLVNDDGNKCTMMVHRLIALTFIPNPENKPTVNHKNHNRGDNRVENLEWATMAEQNNDKKKQ--SSEITRCGRTWPVWRCSLDG------EKLEYYEKISDAEKWLYINIRAKRTTSGKRISDVCRNKRK------TAYGFKWIFDTSEEKIFENEIWKDIPKEFLKGNIGYKISDQGRIKKSENNGIFK-GTIHDAGYKVVTIGSGKGRTHLIHRLVAKVFLPNYYGKPFVNHKDHDKTNCKLYNLEWVTPQENVIA 286 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15727.4225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15727.4225.1 >prot_Ecto-sp13_S_contig15727.4225.1 ID=prot_Ecto-sp13_S_contig15727.4225.1|Name=mRNA_Ecto-sp13_S_contig15727.4225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp MWLPIAKHRGYEASTCGRIRNAKTLRVLKQHTGIRGYKRISLNRHTRSVHback to top mRNA from alignment at Ecto-sp13_S_contig15727:1115..3756+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15727.4225.1 ID=mRNA_Ecto-sp13_S_contig15727.4225.1|Name=mRNA_Ecto-sp13_S_contig15727.4225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2642bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15727:1115..3756+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15727:1115..3756+ >mRNA_Ecto-sp13_S_contig15727.4225.1 ID=mRNA_Ecto-sp13_S_contig15727.4225.1|Name=mRNA_Ecto-sp13_S_contig15727.4225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15727:1115..3756+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |