prot_Ecto-sp13_S_contig15720.4220.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15720.4220.1
Unique Nameprot_Ecto-sp13_S_contig15720.4220.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: D8LHH2_ECTSI (CPLD51 protein required for cyt b6 assembly n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH2_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 5.670e-33
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE
Sbjct:  244 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 303          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: A0A835YMB8_9STRA (CPLD51 protein required for cyt b6 assembly n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB8_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.320e-22
Identity = 44/60 (73.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            GVYYW N  R DKAQVRLET+DDDT  EI IT   EELDR++KTMGY +KGMIRVKG+LE
Sbjct:  217 GVYYWNNAQRKDKAQVRLETTDDDTTVEIRITAGEEELDRMAKTMGYQQKGMIRVKGILE 276          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: A0A7R9UFF5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFF5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.190e-15
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            GVYYWQN S  + AQVRLETSDD   T+I +    EELDR   T+GY +KGM+ VK + +
Sbjct:   62 GVYYWQNASIENSAQVRLETSDDGMTTDIVVRAEKEELDRFQDTLGYSQKGMVYVKSIFD 121          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: A0A7S1VVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVB4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 6.150e-14
Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            GVYYW+ G R D  +V+L  +DDDT  EI + G+ EEL+R+ +T+G+ EKGMI+V+G+L+
Sbjct:  199 GVYYWKAGDRVDDCEVKLTANDDDTENEIAVQGSEEELERMWRTLGWQEKGMIKVEGVLD 258          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: B7GC58_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GC58_PHATC)

HSP 1 Score: 72.4 bits (176), Expect = 6.470e-14
Identity = 30/60 (50.00%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            G+YYWQ+G R D   V+L T++++T  EI + G+ EEL+R+ +T+G+ EKGM+RV GLL+
Sbjct:  170 GIYYWQSGDRVDDCSVKLVTNEEETENEITVQGSEEELERMWRTLGWQEKGMVRVDGLLD 229          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: A0A7S3CSG8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CSG8_9SPIT)

HSP 1 Score: 68.6 bits (166), Expect = 1.960e-13
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            G YY + G R ++ +V++ TSDDD+  +I + G  EELDRLSK +G MEKG + VKGLLE
Sbjct:   52 GAYYLERGERVEQVKVKMVTSDDDSEVDITVQGDPEELDRLSKELGLMEKGKVYVKGLLE 111          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: A0A0D2MFH2_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MFH2_9CHLO)

HSP 1 Score: 68.9 bits (167), Expect = 4.800e-13
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    4 VYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            VYY+Q G R ++ +V++ TSDDD  T+I + G  EE+ RLSK +G +EKGM+ VKG+LE
Sbjct:  115 VYYFQRGERAEEVRVKMVTSDDDLTTDIIVEGDQEEIARLSKELGLVEKGMVYVKGILE 173          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: D8RQ05_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RQ05_SELML)

HSP 1 Score: 69.3 bits (168), Expect = 5.080e-13
Identity = 27/60 (45.00%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            G YYW N SR ++ QV+L  +DD++ T++ + G  E++++L K +G+MEKGM+ VKG+L+
Sbjct:  137 GAYYWTNASRKEEIQVKLVVADDESSTDVLVQGDDEQIEQLRKELGFMEKGMVYVKGILQ 196          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: A0A7S1GP37_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GP37_CYCTE)

HSP 1 Score: 68.9 bits (167), Expect = 5.280e-13
Identity = 26/60 (43.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    3 GVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            G+YYW++G R D  +V+L T++++T  EI + G+ EE++R+ +T+G+ EKGM++V G+ E
Sbjct:  120 GIYYWKSGDRVDDCEVKLSTNEEETENEILVQGSDEEIERMWRTLGWAEKGMVKVAGIFE 179          
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Match: A0A2V0P2I6_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2I6_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 6.430e-12
Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    4 VYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYMEKGMIRVKGLLE 62
            VYY+Q G R ++ +V++ T+DDD  T+I + G  EE+ R++K +G +EKGM+ VKG+LE
Sbjct:  126 VYYYQKGERAEEVRVKMVTADDDMTTDIVVEGDQEEIARMAKELGLVEKGMVYVKGILE 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15720.4220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LHH2_ECTSI5.670e-33100.00CPLD51 protein required for cyt b6 assembly n=2 Ta... [more]
A0A835YMB8_9STRA1.320e-2273.33CPLD51 protein required for cyt b6 assembly n=1 Ta... [more]
A0A7R9UFF5_9STRA5.190e-1555.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1VVB4_9STRA6.150e-1451.67Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B7GC58_PHATC6.470e-1450.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3CSG8_9SPIT1.960e-1353.33Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A0D2MFH2_9CHLO4.800e-1352.54Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
D8RQ05_SELML5.080e-1345.00Uncharacterized protein n=4 Tax=Selaginella moelle... [more]
A0A7S1GP37_CYCTE5.280e-1343.33Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A2V0P2I6_9CHLO6.430e-1247.46Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021919Cofactor assembly of complex C subunit B, CCB1PFAMPF12046CCB1coord: 3..49
e-value: 4.4E-11
score: 42.4
IPR021919Cofactor assembly of complex C subunit B, CCB1PANTHERPTHR35302FAMILY NOT NAMEDcoord: 3..62
NoneNo IPR availablePANTHERPTHR35302:SF1PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, CHLOROPLASTICcoord: 3..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15720contigEcto-sp13_S_contig15720:2241..2920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15720.4220.1mRNA_Ecto-sp13_S_contig15720.4220.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15720 2241..2920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15720.4220.1 ID=prot_Ecto-sp13_S_contig15720.4220.1|Name=mRNA_Ecto-sp13_S_contig15720.4220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
CRGVYYWQNGSRNDKAQVRLETSDDDTLTEIYITGAAEELDRLSKTMGYM
EKGMIRVKGLLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021919CCB1