prot_Ecto-sp13_S_contig15720.4219.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15720.4219.1
Unique Nameprot_Ecto-sp13_S_contig15720.4219.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length284
Homology
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE)

HSP 1 Score: 486 bits (1251), Expect = 2.360e-171
Identity = 266/344 (77.33%), Postives = 273/344 (79.36%), Query Frame = 0
Query:    1 MSGVDYSKWDKMANEMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDGTSDDSGAHPETTPSSSGVVAPADGSTGAVAAAATGSAPRPKVKPPMSDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVK-------------------------------GELAFQAKLGAEDEGEVEWELKDYP------------------------------ASSSSNGDRRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKERVAARKGQPKISVDMGEGDS 283
            MSGVDYSKWDKMA+EMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDG SDDSGAHP+TTPSSSGV APADGSTGAVAAAATG+ P P+VKP +SDERLTENGAAVRGDAN GRQALQYVWRQ RAEVVVVVPVPAGT AGDVEVSLRAKPETIAEGVADLIRVAVK                               GELAFQAKLGAEDEGEVEWELKDYP                              ASSSSNGDRRGVEIVL+KHCPVPNA VWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKE+VAARKGQPKISVDM EGDS
Sbjct:    1 MSGVDYSKWDKMASEMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDGASDDSGAHPDTTPSSSGVAAPADGSTGAVAAAATGTTPTPQVKPLISDERLTENGAAVRGDANAGRQALQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAVKATRGRDGAASRELGTAATAPGGGTKLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPPPAPAAGAREASSSSNGDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKEQVAARKGQPKISVDMEEGDS 344          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.170e-33
Identity = 105/308 (34.09%), Postives = 144/308 (46.75%), Query Frame = 0
Query:    4 VDYSKWDKMANEMSDSDDDNGNN-PEVTTFDQPQSVTFGGTSASQAAEGWDGTSDDSGAHPETTPSSSGVVAPADGSTGAVAAAATGSAPRPKVKPPMSDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAK---PETIAEG-VADLIRVAVKG------ELAFQAKLGAEDEGEVEWELKDY-----PA-------------SSSSNGDRRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIKGR---ATNNHQSVWEEALGMFKERVAARKGQPKISVDMG 279
            VDYSKWDKMA +MSDS+D+ G + P VT FD P SVT+GG  A +                    SS+G     D    A+               P     LT NGAAV+ D      A  Y W Q+R +V + V  P GT A +VEV + +    P   A+  +   ++V+ KG      +L +   L  +D   V+W L+D      PA              SS     R + + LRKH P+  A +WWK  +KGGP ID+AAI+GR     +  Q VW+EA+  F+ RV   K + +  VD+G
Sbjct:    2 VDYSKWDKMAADMSDSEDEEGGSKPVVTAFDNPTSVTWGGGDAPEEERLXXXXXXXXXXXXXXXXSSAGTPGADDSKRAAL------------TDKPARLLTLTRNGAAVQDDCG----AYTYFWSQSRGDVAITVVAPPGTRASEVEVKVTSDASAPTLAAQAPLGHHLKVSAKGAILLEGDLTYPVALDPDDPESVDWVLQDLGLPARPAPESAVESDVSTADQSSERSPARAITVTLRKHSPIAGAALWWKGAVKGGPTIDMAAIEGRDAKGASASQKVWDEAMEGFRARVKQLKLE-RTEVDIG 292          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: X6NBK4_RETFI (CS domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NBK4_RETFI)

HSP 1 Score: 93.2 bits (230), Expect = 2.350e-18
Identity = 87/299 (29.10%), Postives = 149/299 (49.83%), Query Frame = 0
Query:    1 MSGVDYSKWDKMANEMSDSDDDNGNN-PEVTTFDQPQSVTFGGTSASQAAEGWDGTSDDSGAHPETTPSSSGVVAPADGSTGAVAAAATGSAPRPK-------VKPPMSD--------ERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVP-VPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPASSSSN--GDRRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIKGRATN--NHQSVWEEALGMFKERVAARKGQPK-ISVD 277
            M+G++YSKW+K+A  +  SD+++ +N P VT  D+P SVT G T           T + S ++ ++T +++  V            +   + PR +       VKP  ++        + L+E  A V    NGG +  +Y+W Q R EVV+ +  +P  T A  +++    +  T+     D I    K EL++      E++  +EWE+K +P   ++      + + I L+K     N + WW ++ KG P IDVAAIK R T+    +++W+ A   FKE+V  ++ QP+ I +D
Sbjct:    1 MTGINYSKWNKIAEALDSSDEESASNTPHVTKLDRPSSVTIGPTGV---------TINPSPSNNQSTNANNKSVVKKTIENPTAKQSYNSTVPRQQKDQKATIVKPQNNEIIESKVKTKTLSELKAEVL-TVNGG-ETDEYMWSQTRDEVVLFIKNIPLSTKAKSIKIQYNEEKNTVFIQCLDKILYNNK-ELSYNIVKTKEEDCGLEWEIKTFPFCDTNGIASQMKLLTIYLKKKEFSANVITWWGNVFKGDPSIDVAAIKERKTDAKTMRNIWQSAHESFKEKV--KQFQPQTIEID 285          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: A0A7S0KK22_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KK22_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 1.020e-12
Identity = 64/200 (32.00%), Postives = 94/200 (47.00%), Query Frame = 0
Query:  103 ERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIA---EGVADLIRVAVKGELAFQAKLGAEDEGEVE-----------WELKDYPASSSSNGD--RRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIKGRAT---NNHQSVWEEALGMFKERVAARKGQPKISVDMGEGDS 283
            + ++ NG  VR D +G   A++Y WRQ   E    V V   T A DV V + A+   I+   +G    IR   +GE A +      DE E +           WE+ D+      +GD  RR V + +RK       V WW+S +KGGPE+D    + R+    +  Q+ W +A  MF+ER+A R+    I VD    D+
Sbjct:  130 KEMSRNGGVVREDGDG---AVRYFWRQDAKEATASVVVAPKTKAKDVRVDVSAREVKISVMKDG--GEIREVFRGEWAHEIAEEPRDEDEDDIGCRAAPTFGDWEITDF----EGHGDDARRVVRVTVRKKSS-DMLVHWWRSCVKGGPEVDPMTFEDRSATKASQAQTTWAQAQAMFRERIANRE---MIEVDAHTSDA 316          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: L1JV05_GUITC (CS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JV05_GUITC)

HSP 1 Score: 74.7 bits (182), Expect = 5.430e-12
Identity = 62/194 (31.96%), Postives = 96/194 (49.48%), Query Frame = 0
Query:   94 PKVKPPMSDERLTENGAA---------VRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPASSSSNGDRRGVEIVLRKHCP-------VP---NAVVWWKSLLKGGPEIDVAAIKGRATNN---HQSVWEEALGMFKERV 265
            P  K P++++R +   A+          R   NGG    QY+W Q R EVV+   +PAGT A D+ V L ++   +A+    +I   +  +L++       +E  ++WELKD+      +  RR + I LRK  P       +P   + ++WWK +  G  EIDVA+I  R   N   +QSVW+EA   F+  V
Sbjct:   84 PVGKEPLTEQRSSGTSASREEEIASSLARMSRNGGT-CDQYIWSQDRHEVVINFFLPAGTRAKDMSVRLTSEKHLLAKNQEVVI---IDRDLSYPV---VNNEDSLDWELKDF------HDGRRLLRISLRKTLPGMTSLPALPVEESVILWWKCVFVGDAEIDVASIPDRKKKNLSTNQSVWKEAHEKFQHIV 264          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: A0A7S4UCT6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UCT6_GUITH)

HSP 1 Score: 73.9 bits (180), Expect = 1.870e-11
Identity = 80/280 (28.57%), Postives = 118/280 (42.14%), Query Frame = 0
Query:    3 GVDYSKWDKMANEMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDGTSDDSGAHPETTPSSSGVVAPADGSTGAVAAAATGSAPRPKVKPPMSDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPASS-----SSNGDRRGVEIVLRKHCPVPNAVV-WWKSLLKGGPEIDVAAIKGRATNN---HQSVWEEALGMFKERVAARKGQPK 273
            G+DYSKWD+   E+SDS+D      E             G++ S   E         G  P T   SSG  A                           +E +  +    R   NGG    QY+W Q R EVV+   +PAGT A D+ V L ++   +A+    +I   +  +L++       +E  ++WELKD+         S      G+  +     PV  +V+ WWK +  G  EIDVA+I  R   N   +QSVW+EA   F+E +  R  +P+
Sbjct:   93 GLDYSKWDRFTEEVSDSED------EDMXXXXXXXXXXRGSNISMPVEXXXXXXQPVGKEPLTEQRSSGTSA-------------------------SREEEIASS--LARMSRNGGT-CDQYIWSQDRHEVVINFFLPAGTRAKDMSVRLTSEKHLLAKNQEVVI---IDRDLSYPV---VNNEDSLDWELKDFHDGRRLLRISLRKTLPGMTSL--PALPVEESVILWWKCVFVGDAEIDVASIPDRKKKNLSTNQSVWKEAHEKFQEMI--RNSEPR 328          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: A0A2P4YYV1_9CRYT (CS domain protein n=4 Tax=Cryptosporidium TaxID=5806 RepID=A0A2P4YYV1_9CRYT)

HSP 1 Score: 65.1 bits (157), Expect = 9.980e-9
Identity = 62/279 (22.22%), Postives = 114/279 (40.86%), Query Frame = 0
Query:    1 MSGVDYSKWDKMANEMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDGTSDDSGAHPETTPSSSGVVAPADGSTGAVAAAATGSAPRPKVKPPMSDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPASSSSNGDR---RGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIKGRATNNHQS-------VWEEALGMFKERVAARK 269
            MSG+DYSKWDK+     +  + + +   VT FD P S+TFGG   S+         +D+  + +        + P             G   R K+        L+ N     G +  G+    Y W Q   ++ +V+ +     + D +V++     TI  G+  ++    + E+ +       D+  + W +KD  +       R   + + + L K     +  +WWK + KGG E D++      ++N +        VWE+A   F+ ++  R+
Sbjct:    1 MSGIDYSKWDKIEISSDEESEKSVSRCNVTRFDSPHSITFGGHIESE---------EDNKVNSDVKVEEFKKIEP-------------GHVSREKI--------LSLNDYVFGGKSKNGKN---YYWTQTENDLTIVIEISPEMQSKDFKVNVTESDITIMYGLETILLEKFEYEVKY-------DDNTIFWSIKDVESFDKVQNKRIINKMLVLELEKKELNNSIRIWWKRIFKGGIETDISKFNRFTSSNKEERNKKFLQVWEKAHDEFRNKIKNRQ 239          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: A0A8K0DRG7_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DRG7_9ROSA)

HSP 1 Score: 62.8 bits (151), Expect = 1.030e-7
Identity = 49/147 (33.33%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   97 KPPMSDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPASSSSNGDRRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIK 243
            K P+  E+  E+GA V    NG     +Y W Q   EV VV+PVPAGT +  +E  ++           + ++V +KG+           EGE+   +K    S  S  D++ V I+L KH    + + WWKSL+KG PEID   ++
Sbjct:  115 KAPVEVEKKEESGARVPNLGNG-LDLEKYSWTQTLQEVTVVIPVPAGTKSRFIECEIKK----------NRLKVGLKGQPPII-------EGELFRSIKP-DDSYWSLEDQKAVSILLTKH----DQMEWWKSLVKGDPEIDTQKVE 238          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: UPI001263A0BC (protein BOBBER 1 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001263A0BC)

HSP 1 Score: 58.5 bits (140), Expect = 2.820e-6
Identity = 42/149 (28.19%), Postives = 67/149 (44.97%), Query Frame = 0
Query:   95 KVKPPMSDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPASSSSNGDRRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIK 243
            K  PP   +R ++   A+  +   G     Y W Q   E+ +++PVP GT +  V          + E   + ++V +KG+           +GE+   +K      S   D+  + I+L K     N + WWKSLLKGGPEID   ++
Sbjct:  113 KKAPPQEPQRDSDGNPAIVPNKGNGLDLDNYSWTQTLQELTIIIPVPNGTKSRSV----------VCEIKKNHLKVGLKGQPPII-------DGELSQSIKPDDCYWSIE-DQNSISILLTKQ----NQMEWWKSLLKGGPEIDTQKVE 239          
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Match: I6YM86_LINUS (NADH:ubiquinone reductase (non-electrogenic) n=1 Tax=Linum usitatissimum TaxID=4006 RepID=I6YM86_LINUS)

HSP 1 Score: 58.9 bits (141), Expect = 3.580e-6
Identity = 43/151 (28.48%), Postives = 72/151 (47.68%), Query Frame = 0
Query:   93 RPKVKPPMSDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVEVSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPASSSSNGDRRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIK 243
            +P+ + P+  ++  +  ++   +A  G     Y W Q   EV + +PVP GT +  +   ++ K   +    +  I   ++GEL    K+G     E  W L+D          +R V I+L K   + +   WWKSL+KGGPEIDV  ++
Sbjct:   12 QPQHQQPIESKKEKKASSSPVPNAGNGLDLGNYSWGQTLQEVTITIPVPQGTRSKQITCEIKKKSLKLEIKGSPTI---IEGELYGSVKVG-----ESFWNLED----------QRIVSILLTK---LDDKTNWWKSLMKGGPEIDVQKVE 141          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15720.4219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KN83_9PHAE2.360e-17177.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJH1_9STRA2.170e-3334.09CS domain-containing protein n=1 Tax=Tribonema min... [more]
X6NBK4_RETFI2.350e-1829.10CS domain-containing protein n=1 Tax=Reticulomyxa ... [more]
A0A7S0KK22_9CHLO1.020e-1232.00Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
L1JV05_GUITC5.430e-1231.96CS domain-containing protein n=1 Tax=Guillardia th... [more]
A0A7S4UCT6_GUITH1.870e-1128.57Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A2P4YYV1_9CRYT9.980e-922.22CS domain protein n=4 Tax=Cryptosporidium TaxID=58... [more]
A0A8K0DRG7_9ROSA1.030e-733.33Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
UPI001263A0BC2.820e-628.19protein BOBBER 1 n=2 Tax=Anacardiaceae TaxID=4011 ... [more]
I6YM86_LINUS3.580e-628.48NADH:ubiquinone reductase (non-electrogenic) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 107..243
e-value: 1.6E-13
score: 52.6
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 119..242
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 96..243
IPR007052CS domainPROSITEPS51203CScoord: 120..231
score: 8.919

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15720contigEcto-sp13_S_contig15720:50..1078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15720.4219.1mRNA_Ecto-sp13_S_contig15720.4219.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15720 50..1078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15720.4219.1 ID=prot_Ecto-sp13_S_contig15720.4219.1|Name=mRNA_Ecto-sp13_S_contig15720.4219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=284bp
MSGVDYSKWDKMANEMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAE
GWDGTSDDSGAHPETTPSSSGVVAPADGSTGAVAAAATGSAPRPKVKPPM
SDERLTENGAAVRGDANGGRQALQYVWRQARAEVVVVVPVPAGTHAGDVE
VSLRAKPETIAEGVADLIRVAVKGELAFQAKLGAEDEGEVEWELKDYPAS
SSSNGDRRGVEIVLRKHCPVPNAVVWWKSLLKGGPEIDVAAIKGRATNNH
QSVWEEALGMFKERVAARKGQPKISVDMGEGDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR037898NudC_fam
IPR007052CS_dom